Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g05330.t01
CDS Infomation

cds chromosome:12X:11:4657110:4659448:-1 gene:VIT_11s0016g05330 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAATTCGGTAAGAGCCTCAGTAATCAGATCGAGGAGACCTTACCTGAATGGAGAGAC
AAGTTTCTTTCCTACAAGGAACTCAAGAAGCAGTTGAAGCTCATCGATCCCAAAGCCGGA
GACAGGCCGAACAAACGCCTGAGATTGGATGCCGGAGATTGTTTCGATGCCAGAGAGAAG
GAGGCTGGTGACATGACGAAAGAGGAGGTCGATTTCATCAAGTTGTTGGAAGACGAGCTC
GAGAAATTCAATACTTTCTTCGTCGAAAAGGAGGAAGAATATATCATCAGATTGAAGGAG
TTGCAAGATAGGGTTGCAGAAGCAACGGGCTACAATGAAGAGATGATCAAAATTCGGAAG
GAGATTGTGGACTTCCATGGAGAGATGGTCTTGCTGGAGAACTATAGCGCCCTCAATTAT
ACAGGATTGGCAAAGATACTAAAGAAGTATGACAAAAGAACTGGTGCTCTGATTCGGTTG
CCCTTCATTCAGAAGGTCTTGCAGCAGCCCTTCTTCACCACGGATTTGCTTTACAAACTT
GTTAAGGAGTGTGAGGCAATGCTTGACCGCCTCTTCCCAACTAATGAACTGCCAGCATCA
ACTGTGGCAACTGATGGACAGGAAGGGTGTGGTGATCCCACAACTACGGCCACCACCCAG
AATGATTCTCTTCTTAGAATGCCCAAGGAACTTGCAGAGATTGAGTACATGGAGAGCTTA
TGCATGAAGAGCACCATAGCTGCATTGCGGGCTCTGAAGGAAATTCGCAGTAAAAGCTCA
ACTGTTAGTGTATTCTCCTTGCCACCTCTTCAAATTAGTGGATTGGAGGATACATGGAAA
AAGATCCCAGAACTTCCTGTTCTGGAACAAGAAGCCAAGTAG

Peptide Sequence

PEP ID

VIT_11s0016g05330.t01
PEP Infomation

pep chromosome:12X:11:4657110:4659448:-1 gene:VIT_11s0016g05330 transcript:VIT_11s0016g05330.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKFGKSLSNQIEETLPEWRDKFLSYKELKKQLKLIDPKAGDRPNKRLRLDAGDCFDAREK
EAGDMTKEEVDFIKLLEDELEKFNTFFVEKEEEYIIRLKELQDRVAEATGYNEEMIKIRK
EIVDFHGEMVLLENYSALNYTGLAKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKL
VKECEAMLDRLFPTNELPASTVATDGQEGCGDPTTTATTQNDSLLRMPKELAEIEYMESL
CMKSTIAALRALKEIRSKSSTVSVFSLPPLQISGLEDTWKKIPELPVLEQEAK

Transcript Sequence

Transcript ID

VIT_11s0016g05330.t01
Transcript Infomation

cdna chromosome:12X:11:4657110:4659448:-1 gene:VIT_11s0016g05330 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCCCGGAAATATGAAATTCGGTAAGAGCCTCAGTAATCAGATCGAGGAGACCTTACCTGA
ATGGAGAGACAAGTTTCTTTCCTACAAGGAACTCAAGAAGCAGTTGAAGCTCATCGATCC
CAAAGCCGGAGACAGGCCGAACAAACGCCTGAGATTGGATGCCGGAGATTGTTTCGATGC
CAGAGAGAAGGAGGCTGGTGACATGACGAAAGAGGAGGTCGATTTCATCAAGTTGTTGGA
AGACGAGCTCGAGAAATTCAATACTTTCTTCGTCGAAAAGGAGGAAGAATATATCATCAG
ATTGAAGGAGTTGCAAGATAGGGTTGCAGAAGCAACGGGCTACAATGAAGAGATGATCAA
AATTCGGAAGGAGATTGTGGACTTCCATGGAGAGATGGTCTTGCTGGAGAACTATAGCGC
CCTCAATTATACAGGATTGGCAAAGATACTAAAGAAGTATGACAAAAGAACTGGTGCTCT
GATTCGGTTGCCCTTCATTCAGAAGGTCTTGCAGCAGCCCTTCTTCACCACGGATTTGCT
TTACAAACTTGTTAAGGAGTGTGAGGCAATGCTTGACCGCCTCTTCCCAACTAATGAACT
GCCAGCATCAACTGTGGCAACTGATGGACAGGAAGGGTGTGGTGATCCCACAACTACGGC
CACCACCCAGAATGATTCTCTTCTTAGAATGCCCAAGGAACTTGCAGAGATTGAGTACAT
GGAGAGCTTATGCATGAAGAGCACCATAGCTGCATTGCGGGCTCTGAAGGAAATTCGCAG
TAAAAGCTCAACTGTTAGTGTATTCTCCTTGCCACCTCTTCAAATTAGTGGATTGGAGGA
TACATGGAAAAAGATCCCAGAACTTCCTGTTCTGGAACAAGAAGCCAAGTAGTTGGAGTT
TTCTCTCCTCTTTCTTTTCTTTTTCCGAGGGAATTGGGACAGGTCTATCCCTTATGTATC
ATATCTCCCCC