Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g05250.t01
CDS Infomation

cds chromosome:12X:11:4591684:4601631:1 gene:VIT_11s0016g05250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAAATGCCTGGAAAAGAGACAGACCGCCGAGACTCCTCTCTCCCAGAATCCTTCTC
CTGCTCTTCTCCTCTTCTCTCCTCCTCCTCATCTTCCTCTTCCTCTCCTCTCGCACCCCT
AGTCCTATCCCTGTCTCCGCTTTCAAGACCCTAATCCCCTCGCGCACGATCCAACCCTTT
GATTGCTTCAAATGTCCACAGTCCCACCCTGTCATTGCCAACATCGTCGAAGGCGTCAAA
TACCCATTTCTTTACTCCCTCTCCGATTTTGGGACCCTGCCCGACAAGCCCCACAAGAAC
ATTGTTCGGATCCTGAAAGGCAAGCCCTTTCGGAAACCCGATATATCGCTGACGGTTCAG
GAGATTTTGGAGAAGATGAAAGATCAGGGTAAAAATGGGTTTGTTGTTGATGTTGGCGCC
AATGTGGGTATGGCCACTTTTGCCGCAGCTGTGATGGGGTTTCGTGTTTTGGCGTTCGAA
CCGGTATTTGAGAATCTGCAGAGGATTTGCGATGGCATTTTCTTTAATCGCGTTGGGGAG
TCGGTTACTGTGTTTGAAGCTGCTGCTTCGGATCGACTAGGAAATATTACATTTCATAAG
TTGGTTGGTCGGCTTGACAATAGTGCTGTTTCAGCCACTGGTGCAAAGATGGCCTTCAAG
TCCAATGAAGAGATAGAACTTCAAGTAAGGTCCATCCCTCTTGATGAGGTTATCCCAGAG
TCAGAGCCTGTGCTTCTGCTCAAAATTGATGTTCAAGGCTGGGAGTATCATGTACTGAAG
GGGGCCACTAAGTTACTGTCAAGAAAGGAAAGTGAAGCCCCATATCTAATCTATGAGGAA
GATGAGCGATTGTTGCAAGCTAGCAACAGCAGTGCTAAAGAGATTAGGGAGTTCCTCCAC
AGTGTGGGCTACCATCATTGCACTCAGCATGGTACAGATGCCCACTGCACCAAGAAGGGT
TAA

Peptide Sequence

PEP ID

VIT_11s0016g05250.t01
PEP Infomation

pep chromosome:12X:11:4591684:4601631:1 gene:VIT_11s0016g05250 transcript:VIT_11s0016g05250.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MANAWKRDRPPRLLSPRILLLLFSSSLLLLIFLFLSSRTPSPIPVSAFKTLIPSRTIQPF
DCFKCPQSHPVIANIVEGVKYPFLYSLSDFGTLPDKPHKNIVRILKGKPFRKPDISLTVQ
EILEKMKDQGKNGFVVDVGANVGMATFAAAVMGFRVLAFEPVFENLQRICDGIFFNRVGE
SVTVFEAAASDRLGNITFHKLVGRLDNSAVSATGAKMAFKSNEEIELQVRSIPLDEVIPE
SEPVLLLKIDVQGWEYHVLKGATKLLSRKESEAPYLIYEEDERLLQASNSSAKEIREFLH
SVGYHHCTQHGTDAHCTKKG

Transcript Sequence

Transcript ID

VIT_11s0016g05250.t01
Transcript Infomation

cdna chromosome:12X:11:4591684:4601631:1 gene:VIT_11s0016g05250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGGAAAATTCGACTTTCACTTTGCCGGAGAATTTTAAGCTGTCATTTTCCATGGCAAATG
CCTGGAAAAGAGACAGACCGCCGAGACTCCTCTCTCCCAGAATCCTTCTCCTGCTCTTCT
CCTCTTCTCTCCTCCTCCTCATCTTCCTCTTCCTCTCCTCTCGCACCCCTAGTCCTATCC
CTGTCTCCGCTTTCAAGACCCTAATCCCCTCGCGCACGATCCAACCCTTTGATTGCTTCA
AATGTCCACAGTCCCACCCTGTCATTGCCAACATCGTCGAAGGCGTCAAATACCCATTTC
TTTACTCCCTCTCCGATTTTGGGACCCTGCCCGACAAGCCCCACAAGAACATTGTTCGGA
TCCTGAAAGGCAAGCCCTTTCGGAAACCCGATATATCGCTGACGGTTCAGGAGATTTTGG
AGAAGATGAAAGATCAGGGTAAAAATGGGTTTGTTGTTGATGTTGGCGCCAATGTGGGTA
TGGCCACTTTTGCCGCAGCTGTGATGGGGTTTCGTGTTTTGGCGTTCGAACCGGTATTTG
AGAATCTGCAGAGGATTTGCGATGGCATTTTCTTTAATCGCGTTGGGGAGTCGGTTACTG
TGTTTGAAGCTGCTGCTTCGGATCGACTAGGAAATATTACATTTCATAAGTTGGTTGGTC
GGCTTGACAATAGTGCTGTTTCAGCCACTGGTGCAAAGATGGCCTTCAAGTCCAATGAAG
AGATAGAACTTCAAGTAAGGTCCATCCCTCTTGATGAGGTTATCCCAGAGTCAGAGCCTG
TGCTTCTGCTCAAAATTGATGTTCAAGGCTGGGAGTATCATGTACTGAAGGGGGCCACTA
AGTTACTGTCAAGAAAGGAAAGTGAAGCCCCATATCTAATCTATGAGGAAGATGAGCGAT
TGTTGCAAGCTAGCAACAGCAGTGCTAAAGAGATTAGGGAGTTCCTCCACAGTGTGGGCT
ACCATCATTGCACTCAGCATGGTACAGATGCCCACTGCACCAAGAAGGGTTAATGAACAG
ATTTTGCTAGTATTATTGCCATGGGGCCCAGACAGAATCTAATAGCATAACTGCAACTTG
TTTCTTATTCTCTCTTCGATGCAGTGAGAGGTATTTGGCTGGCTTGGTATCACTTTTTGT
GGAAAATGATCCAATACATCAGTGGAAGTTACTAAGGGAACTACCAATATAGGAGTCAGT
AACTGCAAAATTAAAGATGACTAAGCTTTAACTCCAGCTTCCTCACTGTTTGTAGTAACT
ATCTCTAGAAGGGTTCTGAATATAAAAGGAAATCCATATTTGGAAGCAGCTGCATGATGA
ATTGGCTTTTCTGGAGAATCTTAGTTACCCTTCTTAGTTTCTTTGTTGTAGGTGTTCATT
TTGGTTATATTGGTTTGCAACTGTGTCAAAAGGTACAATTCTTTATTCTTCCATGCATGG
ATGCTGGAATAACCCATTGATATTTTTAATGTTTCCACGACATACTGGATCA