Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g05230.t01
CDS Infomation

cds chromosome:12X:11:4503500:4505047:-1 gene:VIT_11s0016g05230 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGTGATCAACAAGTATGTGACCATAAAAACCCACGTAGATGGTGCACCGCAAGAC
TCTGATTTCGAGCTCAAGACTGCAGCTCTTCGCCTGTGGGCTGAGCCGGGTTCCAACGAT
GTCATTGTGAAGAACCTCTATGTATCCATAGATCCATACCAGCTAAACCGGATGAAGAGT
TATAGCTCATCGCATAGGACGATAAATTTTGCAGTGCCGATTAGTCCTGGCATGGATATT
GATGCTTATGGGGTGGGGAGAGTTGTGGCTTCTGGCCACCCGGAATTTGAAGAAGATGAT
TTGGTGGTGGGGCTCATCAGCTGGGGAGAGTATAGTGTTGTGAAAGGAGGCAACATGTTG
AGGAAGTTGGATCCCATGGGATTTCCCTTATCCAACCATGTTGGAATTCTAGGATTCAGT
GGGTTGACAGCCCATGGTGGATTTTTCCAGGTATGCAAGCCCAAGAAAGGAGAGAAAGTG
TTTGTTTCTGCTGCTTCTGGGTCAGTTGGAAATTTGGTGGGGCAATATGCAAAGCTGTTT
GGATGCTATGTTGTTGGATGTGCTGGAAGCAAACAAAAGGTCAATTTGCTTAAAGAGAAG
CTTGGTTTTGATGATGCATTCAACTATAAGGAAGAAACTGATCTGAAGTCAACTCTCAAA
AGGTACTTTCCTGATGGGATTGATATATATTTTGACAATGTGGGAGCTGAGATGCTAGAA
GCAGCAGTTGCCAATATGAACATCTTTGGTAGAGTTGCCGTTTGTGGAGTAATCTCCCAG
TATACAGACAGTGGAAAGCGAGCTGCACCAGACATGCTAGACATTGTGTACAAGAGAATC
ACAATGCAAGGGTTCTTAGCTGCTGATCTGATGAATGGCTACACGGATTTCATTTCCACG
ACACAAGATTACCTAAATGATGGCAAAATTCAAGTGATTGAAGACATTTCCCAGGGCGTG
GAGAGTATCCCATCTGCTTTCGTAGGGCTGTTTCGTGGTGATAATGTTGGGAAAAAGATT
GTAAAAATTGCAGATGAATGA

Peptide Sequence

PEP ID

VIT_11s0016g05230.t01
PEP Infomation

pep chromosome:12X:11:4503500:4505047:-1 gene:VIT_11s0016g05230 transcript:VIT_11s0016g05230.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEVINKYVTIKTHVDGAPQDSDFELKTAALRLWAEPGSNDVIVKNLYVSIDPYQLNRMKS
YSSSHRTINFAVPISPGMDIDAYGVGRVVASGHPEFEEDDLVVGLISWGEYSVVKGGNML
RKLDPMGFPLSNHVGILGFSGLTAHGGFFQVCKPKKGEKVFVSAASGSVGNLVGQYAKLF
GCYVVGCAGSKQKVNLLKEKLGFDDAFNYKEETDLKSTLKRYFPDGIDIYFDNVGAEMLE
AAVANMNIFGRVAVCGVISQYTDSGKRAAPDMLDIVYKRITMQGFLAADLMNGYTDFIST
TQDYLNDGKIQVIEDISQGVESIPSAFVGLFRGDNVGKKIVKIADE

Transcript Sequence

Transcript ID

VIT_11s0016g05230.t01
Transcript Infomation

cdna chromosome:12X:11:4503500:4505047:-1 gene:VIT_11s0016g05230 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCAATCCTGAACCCCTGAGCGTTAATTGATAGCTCAAAATTGGATCCATGGGAATGGAAG
TGATCAACAAGTATGTGACCATAAAAACCCACGTAGATGGTGCACCGCAAGACTCTGATT
TCGAGCTCAAGACTGCAGCTCTTCGCCTGTGGGCTGAGCCGGGTTCCAACGATGTCATTG
TGAAGAACCTCTATGTATCCATAGATCCATACCAGCTAAACCGGATGAAGAGTTATAGCT
CATCGCATAGGACGATAAATTTTGCAGTGCCGATTAGTCCTGGCATGGATATTGATGCTT
ATGGGGTGGGGAGAGTTGTGGCTTCTGGCCACCCGGAATTTGAAGAAGATGATTTGGTGG
TGGGGCTCATCAGCTGGGGAGAGTATAGTGTTGTGAAAGGAGGCAACATGTTGAGGAAGT
TGGATCCCATGGGATTTCCCTTATCCAACCATGTTGGAATTCTAGGATTCAGTGGGTTGA
CAGCCCATGGTGGATTTTTCCAGGTATGCAAGCCCAAGAAAGGAGAGAAAGTGTTTGTTT
CTGCTGCTTCTGGGTCAGTTGGAAATTTGGTGGGGCAATATGCAAAGCTGTTTGGATGCT
ATGTTGTTGGATGTGCTGGAAGCAAACAAAAGGTCAATTTGCTTAAAGAGAAGCTTGGTT
TTGATGATGCATTCAACTATAAGGAAGAAACTGATCTGAAGTCAACTCTCAAAAGGTACT
TTCCTGATGGGATTGATATATATTTTGACAATGTGGGAGCTGAGATGCTAGAAGCAGCAG
TTGCCAATATGAACATCTTTGGTAGAGTTGCCGTTTGTGGAGTAATCTCCCAGTATACAG
ACAGTGGAAAGCGAGCTGCACCAGACATGCTAGACATTGTGTACAAGAGAATCACAATGC
AAGGGTTCTTAGCTGCTGATCTGATGAATGGCTACACGGATTTCATTTCCACGACACAAG
ATTACCTAAATGATGGCAAAATTCAAGTGATTGAAGACATTTCCCAGGGCGTGGAGAGTA
TCCCATCTGCTTTCGTAGGGCTGTTTCGTGGTGATAATGTTGGGAAAAAGATTGTAAAAA
TTGCAGATGAATGA