Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g05220.t01
CDS Infomation

cds chromosome:12X:11:4500855:4501880:-1 gene:VIT_11s0016g05220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGGATGTTGAGCATGCGAGAATCTTATTTGAAGATATGCCTGAGAGAAATGCAATA
TCCTGGAGTGCAGTAATGGCAGCTTACTCAAGGGTCGGCGACTTCAAAGAGGTGCTTTGC
CTATTTAGGCGGATGCAAGAGGCAGGAACAATGCCGAATGAGTCTGTTCTAGTGAGTGTT
CTTACTGCCTGTGCTCATCTTGGTGCACTCGCACAGGGACTGTGGGTTCACTCCTATGCT
AAGCAATGTAATTTTGATTCAAATCCAATCTTGGCTACCGCATTAGTTGACATGTACTCA
AAATGTGGTTGTGTGGAGTCAGCTTTATCAACTTTTCAGGGTATTCCCAACAAAGATGCC
GGAGCATGGAATGCTATGATATCTGGGGTTGCAATGAATGGAGACGCATGGAAATCACTT
GAACTCTTCAATAAAATGATCTCAAATGGGACTCAACCCACAGAGACCACATTTGTTGCT
GTCCTAACTGCTTGTACTCATGCAAGGTTGGTTAAAGAAGGCCTCAAATTGTTTGAGCAA
ATGAGTAGTAACTATGGGGTTGAGCCTCAGCTTGAGCATTACGCGTGTCTGGTTGACCTT
ATGGCCAGAGCAGGTATGTTAGCAGAAGCTGAGAAGTTTATAGAAGAGAAGATGGGTGGA
CTTGGTAGAGGGGATGCTAATGTGTGGGGAGCTATGCTGGGTGCTTGTAGAACTTATGGA
AATATTGAGGTTGGGAACAGGGTTTGGAAAAAGCTTGCTGACATGGGGGTGGCTGATTGT
GGTACTCATGTGCTTTCATATAATCTCTATAGGGAAGCTGGCTGGGATATGGAGGCCAAG
AGAGTCAGGAGATTGATCTCAGAGGCTGGAATGAAGAAGAAACCTGGTTGCAGCATAATA
GAGGTTGATGGTACAGTCGAAGAGTTCCTTGCAGGCGATCTTTCTCATTCACAAGCACCA
CAAATATGTAAAACACTTGATTCCTTGTCCAATATTGGGCGTTTGGAGTGTTACAATGGT
GCATAA

Peptide Sequence

PEP ID

VIT_11s0016g05220.t01
PEP Infomation

pep chromosome:12X:11:4500855:4501880:-1 gene:VIT_11s0016g05220 transcript:VIT_11s0016g05220.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNESVLVSV
LTACAHLGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESALSTFQGIPNKDA
GAWNAMISGVAMNGDAWKSLELFNKMISNGTQPTETTFVAVLTACTHARLVKEGLKLFEQ
MSSNYGVEPQLEHYACLVDLMARAGMLAEAEKFIEEKMGGLGRGDANVWGAMLGACRTYG
NIEVGNRVWKKLADMGVADCGTHVLSYNLYREAGWDMEAKRVRRLISEAGMKKKPGCSII
EVDGTVEEFLAGDLSHSQAPQICKTLDSLSNIGRLECYNGA

Transcript Sequence

Transcript ID

VIT_11s0016g05220.t01
Transcript Infomation

cdna chromosome:12X:11:4500855:4501880:-1 gene:VIT_11s0016g05220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGGATGTTGAGCATGCGAGAATCTTATTTGAAGATATGCCTGAGAGAAATGCAATA
TCCTGGAGTGCAGTAATGGCAGCTTACTCAAGGGTCGGCGACTTCAAAGAGGTGCTTTGC
CTATTTAGGCGGATGCAAGAGGCAGGAACAATGCCGAATGAGTCTGTTCTAGTGAGTGTT
CTTACTGCCTGTGCTCATCTTGGTGCACTCGCACAGGGACTGTGGGTTCACTCCTATGCT
AAGCAATGTAATTTTGATTCAAATCCAATCTTGGCTACCGCATTAGTTGACATGTACTCA
AAATGTGGTTGTGTGGAGTCAGCTTTATCAACTTTTCAGGGTATTCCCAACAAAGATGCC
GGAGCATGGAATGCTATGATATCTGGGGTTGCAATGAATGGAGACGCATGGAAATCACTT
GAACTCTTCAATAAAATGATCTCAAATGGGACTCAACCCACAGAGACCACATTTGTTGCT
GTCCTAACTGCTTGTACTCATGCAAGGTTGGTTAAAGAAGGCCTCAAATTGTTTGAGCAA
ATGAGTAGTAACTATGGGGTTGAGCCTCAGCTTGAGCATTACGCGTGTCTGGTTGACCTT
ATGGCCAGAGCAGGTATGTTAGCAGAAGCTGAGAAGTTTATAGAAGAGAAGATGGGTGGA
CTTGGTAGAGGGGATGCTAATGTGTGGGGAGCTATGCTGGGTGCTTGTAGAACTTATGGA
AATATTGAGGTTGGGAACAGGGTTTGGAAAAAGCTTGCTGACATGGGGGTGGCTGATTGT
GGTACTCATGTGCTTTCATATAATCTCTATAGGGAAGCTGGCTGGGATATGGAGGCCAAG
AGAGTCAGGAGATTGATCTCAGAGGCTGGAATGAAGAAGAAACCTGGTTGCAGCATAATA
GAGGTTGATGGTACAGTCGAAGAGTTCCTTGCAGGCGATCTTTCTCATTCACAAGCACCA
CAAATATGTAAAACACTTGATTCCTTGTCCAATATTGGGCGTTTGGAGTGTTACAATGGT
GCATAA