Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g05210.t01
CDS Infomation

cds chromosome:12X:11:4493089:4499471:1 gene:VIT_11s0016g05210 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGAACAAGCCTCAGCACAAGAAGAAGAAATGGTTCCTTCCACTGGTTTTCTCCCTT
CTGGTCTTCTCTTTTCTTGTTGTACTAGCGATCTTCACCTCCACCTCCACCTCGCCGTTT
CACCGCCAACCCATCAAGGTGCAGAACCCTGTTTTTGTGGAATCGAAGCTGGGGTTGGCT
TCTGCGAGCTCCGCCAATTCTGTGCCCAGAATTGCTTACTTAATTTCTGGGTCGAAGGGG
GATGGTTTGAGCTTGAGGAGGACGCTGAAGGCTCTGTACCATCCATGGAACCAGTACGCT
GTGCATTTGGACCTCAAGGCCTCGCCCGAGGAGAGATTGGAGTTGTTGAATTTTGTGAAG
AACGAATCTGTTTTTTCCAGGTGGGGTAATGTTAGGGTGATTGTGAGGGCCAATTTGGTT
ACGTATAGAGGGCCTACTATGGTTAGTAATACGCTTCATGCTGCGGCGATTTTGATGAAG
GAAGGTGGAGATTGGGATTGGTTCATCAATTTGAGTGCCTCCGACTATCCTCTGGTGACC
CAAGATGATCTACTTCACACTTTGTCAACTATTCCAAGGGACCTCAATTTTATCGAGCAT
ACCAGTGATATTGGATGGAAAGAGTATCAAAGAGCCAAGCCTCTTATAATAGATCCAGGG
CTGTATAGCTTAAAAAAGACAGATGTGTTTTGGGCAACAGAAACAAGGAGTGTACCAACA
GCATATAGACTGTTTACAGGTTCTGCTTGGATGATGCTCTCACGCTCTTTTGTGGAATAT
ACATTATGGGGTTGGGACAACCTCCCAAGAATAGTCCTCATGTACTATGCCAACTTTCTT
TCTTCACCTGAAGGGTATTTCCATACGGTTATCTGCAATGCAGAGGAATTTCGGAACACA
ACAGTTAACCATGACCTCCACTTCATTTCATGGGACAACCCTCCGAAGCAGCACCCACAT
TTCCTAACTGTTGACAACTACCAGTCAATGATAGGCAGCAATGCCCCCTTTGCGAGGAAA
TTTGGCAGGAATGAACCAGTTCTTGACAAGATTGATAAGGAGCTACTGGGTCGAAGCGCA
GATGGGTTCGTGCCAGGTGGATGGTTCAACAATGAAGGAAACACAAACATTACAGCCCCA
CATGATATCATAGCTAATGTCTCTATACTCAGGCCTGGTCCCGGTGCTGAAAGGCTCAAC
CGCCTCATAACTGGCTTGTTATCAGCAGAAGATTTCCAGAGAAACCAATGTGCCTGA

Peptide Sequence

PEP ID

VIT_11s0016g05210.t01
PEP Infomation

pep chromosome:12X:11:4493089:4499471:1 gene:VIT_11s0016g05210 transcript:VIT_11s0016g05210.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MENKPQHKKKKWFLPLVFSLLVFSFLVVLAIFTSTSTSPFHRQPIKVQNPVFVESKLGLA
SASSANSVPRIAYLISGSKGDGLSLRRTLKALYHPWNQYAVHLDLKASPEERLELLNFVK
NESVFSRWGNVRVIVRANLVTYRGPTMVSNTLHAAAILMKEGGDWDWFINLSASDYPLVT
QDDLLHTLSTIPRDLNFIEHTSDIGWKEYQRAKPLIIDPGLYSLKKTDVFWATETRSVPT
AYRLFTGSAWMMLSRSFVEYTLWGWDNLPRIVLMYYANFLSSPEGYFHTVICNAEEFRNT
TVNHDLHFISWDNPPKQHPHFLTVDNYQSMIGSNAPFARKFGRNEPVLDKIDKELLGRSA
DGFVPGGWFNNEGNTNITAPHDIIANVSILRPGPGAERLNRLITGLLSAEDFQRNQCA

Transcript Sequence

Transcript ID

VIT_11s0016g05210.t01
Transcript Infomation

cdna chromosome:12X:11:4493089:4499471:1 gene:VIT_11s0016g05210 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATCTCAACCTCCGCCTGTCGCGCGTCGGGAAAAGCAAAATTGACAGCCGCAACGCCACCG
CCACCGCCACCGCCAGTCAGTCACCCCCACAGCCATCATTGATTCCGTGAACTGCGGTGG
TGTCTCATCGACGCCAGCACCGCCCTTTCTCGCTCGCTCTGCTTCTACTTTCATGCCCAC
AACAAACCCATCTCAAGTCTCAACTATGGAGAACAAGCCTCAGCACAAGAAGAAGAAATG
GTTCCTTCCACTGGTTTTCTCCCTTCTGGTCTTCTCTTTTCTTGTTGTACTAGCGATCTT
CACCTCCACCTCCACCTCGCCGTTTCACCGCCAACCCATCAAGGTGCAGAACCCTGTTTT
TGTGGAATCGAAGCTGGGGTTGGCTTCTGCGAGCTCCGCCAATTCTGTGCCCAGAATTGC
TTACTTAATTTCTGGGTCGAAGGGGGATGGTTTGAGCTTGAGGAGGACGCTGAAGGCTCT
GTACCATCCATGGAACCAGTACGCTGTGCATTTGGACCTCAAGGCCTCGCCCGAGGAGAG
ATTGGAGTTGTTGAATTTTGTGAAGAACGAATCTGTTTTTTCCAGGTGGGGTAATGTTAG
GGTGATTGTGAGGGCCAATTTGGTTACGTATAGAGGGCCTACTATGGTTAGTAATACGCT
TCATGCTGCGGCGATTTTGATGAAGGAAGGTGGAGATTGGGATTGGTTCATCAATTTGAG
TGCCTCCGACTATCCTCTGGTGACCCAAGATGATCTACTTCACACTTTGTCAACTATTCC
AAGGGACCTCAATTTTATCGAGCATACCAGTGATATTGGATGGAAAGAGTATCAAAGAGC
CAAGCCTCTTATAATAGATCCAGGGCTGTATAGCTTAAAAAAGACAGATGTGTTTTGGGC
AACAGAAACAAGGAGTGTACCAACAGCATATAGACTGTTTACAGGTTCTGCTTGGATGAT
GCTCTCACGCTCTTTTGTGGAATATACATTATGGGGTTGGGACAACCTCCCAAGAATAGT
CCTCATGTACTATGCCAACTTTCTTTCTTCACCTGAAGGGTATTTCCATACGGTTATCTG
CAATGCAGAGGAATTTCGGAACACAACAGTTAACCATGACCTCCACTTCATTTCATGGGA
CAACCCTCCGAAGCAGCACCCACATTTCCTAACTGTTGACAACTACCAGTCAATGATAGG
CAGCAATGCCCCCTTTGCGAGGAAATTTGGCAGGAATGAACCAGTTCTTGACAAGATTGA
TAAGGAGCTACTGGGTCGAAGCGCAGATGGGTTCGTGCCAGGTGGATGGTTCAACAATGA
AGGAAACACAAACATTACAGCCCCACATGATATCATAGCTAATGTCTCTATACTCAGGCC
TGGTCCCGGTGCTGAAAGGCTCAACCGCCTCATAACTGGCTTGTTATCAGCAGAAGATTT
CCAGAGAAACCAATGTGCCTGACATTTGAGAACCAGCAAGCAACCACAGTAAGGCTCCCA
GCTTCTACCTTATACTGGATTCACGTATCAGTTCCCCGCTGCTCAATTAATAACAGAGGC
TTGCCAATTGCAATAACAACATGGATACACAAGTTATGGGGTGAAGGGAAAGATATACCT
GTCTGTACTGTTTGCCTTTACCCTTTTATTTTCCAATGAACCTCCAAGCCCCATGGCTAA
AGCTTTATCCTTATTATTTTTTGTTTATAAAGCTGATTTAACATTTCCAAATTAAACTCC
ATTAATTTGTTTTGTTG