Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g05090.t01
CDS Infomation

cds chromosome:12X:11:4374399:4380443:1 gene:VIT_11s0016g05090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCGTGGGCTGATGTCTCCACTGACACACCCACCAACCCAACTCGCCTTGCTCGCCCC
ACTCGCCCCACATACGTGCCCCCACATCTCCGGCATGGTGCTGCGGTTGCCACCACCAAC
GGCGCCACTCCAATCGGTTCCGACTGCCCTCCAGAACAAGGCCGGACTGCTACCAGCCGG
GGCCGTGGCCAGAGCCGGGGACGTGGACGTGGGCAAGGATGGGGTCAGGGGAGAGAGGCT
TCTGAGGCAAATGCTAGCCCATTCGACGGTTCTGAGAAATTTGATGAATTGGAAGAGGTA
GAAGACACTAATGGTGGTTTGAGTATAAATTTCGATGCGTACGAGGACATACCAGTTGAG
GCCAGTGGCTCCGATATACCCCCACCTGTCAGTGCATTTGCAGAGATTCATCTGGGTGAG
GGTTTGAACCAAAATATCAGAAGGTGCAAGTACGTGAAACCGACGCCGATACAACGCCAT
GCCATTCCGATTGCAATGGCGGGTCGAGATTTGATGGCCTGTGCCCAGACGGGTTCGGGC
AAAACGGCGGCGTTTTGTTTCCCGATCATATGTGGTATTTTGAGGAACCAGTTATCGCGG
GGTGGTGCCAGGCTTGCTTGTCCAACTGCTCTTATCCTATCTCCGACGCGGGAATTGTCT
TGTCAGATACACGAGGAAGCTAAGAAGTTCTCTTATAAAACCGGTTTGAAGGTGGTAGTA
GCTTATGGAGGAGCACCAATATCTCAGCAGTTCCGTAATTTGGAAAGAGGTGTGGACATC
TTAGTTGCTACACCTGGTCGCCTTGTGGATATGATTGAGAGAGCAAGAGTTTCTCTTAGA
ATGATAAAATATTTGGCTTTGGATGAGGCTGATAGAATGTTGGATATGGGCTTTGAGCCT
CAGATCAGGAAGATTGTCGAGCAGATGGATATGCCACCACCAGGTGCGAGACAGACAATG
CTTTTCAGTGCTACGTTTCCTAATGAGATACAGAGGCTTGCTGCGGATTTTTTATCAAAC
TACATATTTCTATCTGTAGGACGAGTTGGTTCAAGCACTGATCTTATCGTGCAGAGAGTT
GAATTTGTTGAAGATACAGACAAACGTTACCATCTGATGGATCTTCTTCAATCTCAAATG
ACAAATAGAACCCCCAAAAAGTATGCTTTAACTCTAGTTTTTGTGGAGACGAAGAGAGGA
GTAGATGCATTAGAACAGTGGTTGTGCATGAATGGTCTGGCAGCAACAGCAATACATGGT
GACAAAGTGCAAATGGAAAGGGAACGGGCCTTGAAATCATTCAAAAGTGGAGCCACTCCG
ATAATGGTAGCAACTGATGTTGCTGCACGAGGCCTGGATATTCCACATGTAGCACATGTC
ATCAACTTTGATCTGCCAAAAGCCATAGATGACTATGTTCACAGAATAGGCCGGACAGGT
CGTGCCGGTAAATCAGGTCTAGCAACAGCATTTTTCAATGATGGGAACCTTTCCCTTGCA
AAATCACTTGTGGAGCTAATGCAGGAATCAAACCAAGAGGTTCCTTCTTGGTTGAACCAA
TATGCTGAGAGACCATCATATGGTGGTGGTCGGTCCCGATACGGGGGTGGCAGGTTTGGT
GGACATGATTTTCGAAGTAGTTCTCAATTGAAAAGGGAAGACTACTACTCTCCAAGTCCA
TATGGTGATGTGACTCAGACTGACGTTTTTGTTGCCCCTGCTTCTGGTGAAGGTTACTAT
TCAATCCCTTATGGTGAAGCAGCTCCACCTGACTCTTATGCTGCTGGATCAGACAGATAT
GGATTTGATCATGGTTCAATTGTGGCAAGTGGTTGGGACTAA

Peptide Sequence

PEP ID

VIT_11s0016g05090.t01
PEP Infomation

pep chromosome:12X:11:4374399:4380443:1 gene:VIT_11s0016g05090 transcript:VIT_11s0016g05090.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSWADVSTDTPTNPTRLARPTRPTYVPPHLRHGAAVATTNGATPIGSDCPPEQGRTATSR
GRGQSRGRGRGQGWGQGREASEANASPFDGSEKFDELEEVEDTNGGLSINFDAYEDIPVE
ASGSDIPPPVSAFAEIHLGEGLNQNIRRCKYVKPTPIQRHAIPIAMAGRDLMACAQTGSG
KTAAFCFPIICGILRNQLSRGGARLACPTALILSPTRELSCQIHEEAKKFSYKTGLKVVV
AYGGAPISQQFRNLERGVDILVATPGRLVDMIERARVSLRMIKYLALDEADRMLDMGFEP
QIRKIVEQMDMPPPGARQTMLFSATFPNEIQRLAADFLSNYIFLSVGRVGSSTDLIVQRV
EFVEDTDKRYHLMDLLQSQMTNRTPKKYALTLVFVETKRGVDALEQWLCMNGLAATAIHG
DKVQMERERALKSFKSGATPIMVATDVAARGLDIPHVAHVINFDLPKAIDDYVHRIGRTG
RAGKSGLATAFFNDGNLSLAKSLVELMQESNQEVPSWLNQYAERPSYGGGRSRYGGGRFG
GHDFRSSSQLKREDYYSPSPYGDVTQTDVFVAPASGEGYYSIPYGEAAPPDSYAAGSDRY
GFDHGSIVASGWD

Transcript Sequence

Transcript ID

VIT_11s0016g05090.t01
Transcript Infomation

cdna chromosome:12X:11:4374399:4380443:1 gene:VIT_11s0016g05090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCGGAAAACGTGCTTGAGTTGTGTCCACCTTCCTCTCTCTCTCTAGGGTTTTGTAGCTT
TTTAATTTTTTTCCCCATGGGGTCTACATCACATCTCTCACCTGTATATTATCCAACTCA
GCTCTGTTTTTGAATCAATCAAACTACTCAAACGGTTCATTTCCCATTTCTTTCACACTT
TCTCCGTGCATTTCTGAAGCTTTACAGCGGTCTCTGGCCTAGGGTTTTACCCATTTCATC
GCTGTTTGCTTCACCGAGGGTTGAGCTTTGGGAAGCTTTCATTAACGATGACAATGTCGT
GGGCTGATGTCTCCACTGACACACCCACCAACCCAACTCGCCTTGCTCGCCCCACTCGCC
CCACATACGTGCCCCCACATCTCCGGCATGGTGCTGCGGTTGCCACCACCAACGGCGCCA
CTCCAATCGGTTCCGACTGCCCTCCAGAACAAGGCCGGACTGCTACCAGCCGGGGCCGTG
GCCAGAGCCGGGGACGTGGACGTGGGCAAGGATGGGGTCAGGGGAGAGAGGCTTCTGAGG
CAAATGCTAGCCCATTCGACGGTTCTGAGAAATTTGATGAATTGGAAGAGGTAGAAGACA
CTAATGGTGGTTTGAGTATAAATTTCGATGCGTACGAGGACATACCAGTTGAGGCCAGTG
GCTCCGATATACCCCCACCTGTCAGTGCATTTGCAGAGATTCATCTGGGTGAGGGTTTGA
ACCAAAATATCAGAAGGTGCAAGTACGTGAAACCGACGCCGATACAACGCCATGCCATTC
CGATTGCAATGGCGGGTCGAGATTTGATGGCCTGTGCCCAGACGGGTTCGGGCAAAACGG
CGGCGTTTTGTTTCCCGATCATATGTGGTATTTTGAGGAACCAGTTATCGCGGGGTGGTG
CCAGGCTTGCTTGTCCAACTGCTCTTATCCTATCTCCGACGCGGGAATTGTCTTGTCAGA
TACACGAGGAAGCTAAGAAGTTCTCTTATAAAACCGGTTTGAAGGTGGTAGTAGCTTATG
GAGGAGCACCAATATCTCAGCAGTTCCGTAATTTGGAAAGAGGTGTGGACATCTTAGTTG
CTACACCTGGTCGCCTTGTGGATATGATTGAGAGAGCAAGAGTTTCTCTTAGAATGATAA
AATATTTGGCTTTGGATGAGGCTGATAGAATGTTGGATATGGGCTTTGAGCCTCAGATCA
GGAAGATTGTCGAGCAGATGGATATGCCACCACCAGGTGCGAGACAGACAATGCTTTTCA
GTGCTACGTTTCCTAATGAGATACAGAGGCTTGCTGCGGATTTTTTATCAAACTACATAT
TTCTATCTGTAGGACGAGTTGGTTCAAGCACTGATCTTATCGTGCAGAGAGTTGAATTTG
TTGAAGATACAGACAAACGTTACCATCTGATGGATCTTCTTCAATCTCAAATGACAAATA
GAACCCCCAAAAAGTATGCTTTAACTCTAGTTTTTGTGGAGACGAAGAGAGGAGTAGATG
CATTAGAACAGTGGTTGTGCATGAATGGTCTGGCAGCAACAGCAATACATGGTGACAAAG
TGCAAATGGAAAGGGAACGGGCCTTGAAATCATTCAAAAGTGGAGCCACTCCGATAATGG
TAGCAACTGATGTTGCTGCACGAGGCCTGGATATTCCACATGTAGCACATGTCATCAACT
TTGATCTGCCAAAAGCCATAGATGACTATGTTCACAGAATAGGCCGGACAGGTCGTGCCG
GTAAATCAGGTCTAGCAACAGCATTTTTCAATGATGGGAACCTTTCCCTTGCAAAATCAC
TTGTGGAGCTAATGCAGGAATCAAACCAAGAGGTTCCTTCTTGGTTGAACCAATATGCTG
AGAGACCATCATATGGTGGTGGTCGGTCCCGATACGGGGGTGGCAGGTTTGGTGGACATG
ATTTTCGAAGTAGTTCTCAATTGAAAAGGGAAGACTACTACTCTCCAAGTCCATATGGTG
ATGTGACTCAGACTGACGTTTTTGTTGCCCCTGCTTCTGGTGAAGGTTACTATTCAATCC
CTTATGGTGAAGCAGCTCCACCTGACTCTTATGCTGCTGGATCAGACAGATATGGATTTG
ATCATGGTTCAATTGTGGCAAGTGGTTGGGACTAAATGACTCATTTCATACTTTAAAGTG
GCTATACTTAGCATTTGGTATAGAGTAGTTTTGACATATAAACAGCTGCTGAAGACTACA
GGAAGTGAAAATAGTTCCAACTGTGGCTGTCCACAAATACTTAAGCTTTACATGGTCTTT
TGCCCTGATTAAACGCCATTGACTGTAGCTGTCTTTTTGTTAGTTGGTACATTCCTAGTA
TTTGATCATCTGTGGTTTATTCCTCTTGGGAGGAAATGAAGGTTGACCATTCCCTCTATG
CAGGATGGTTGTCTTGTAATGAATATACTCTCATGTATATTTGTAAAGCTTCAAGATGAA
TCTTGAACCCAGGTGGGATATGGAATGTTGTTTTCATTCCTTCAATTATGTTATACTTTT
GTTGTTCAGTACATTGCTTTTCTAATTTTATACACTCTGGTTCATGGTTGATTATTTAAA
GCAA