Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g05080.t01
CDS Infomation

cds chromosome:12X:11:4363663:4373149:1 gene:VIT_11s0016g05080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTGGGGTCACTCTTTGCAAAGACTTCTCTGAAACCAAGCGCCCTTCACCTTTTCCAA
TTCAATCTACAGAGAGGTCTACATAGTAGAAATAAGAAGGCTGCGGAGTTCTTAGCACAA
GGGTTTAGTGCTATAAAGGAAGTTGACAGGGTCATGGATAAATCAGAGCCCAATAGCCGC
CTTCTCATACCTCTCCTCAGGAAAGCAAAGGAAAACTTTGAGTTAGCTCTGGAGGCTGAC
AACTCAAACGCCCATGCTAGGTATTGGTTGTCCAAATTGCATCTCAAGTACCATGTCCCA
GGGGCATGCAAAGCTATTGGAGCTGCTTTGTTAGTGGAAGCTGCAGATATGGGTGATGCT
GAAGCACAGTATGAATTGGGTCGTCGTCTAAGATATGAGAATGAATATGTTCAGTCAGGA
CAACAAGCTTTCTATTACTTGGAGAAGGCTGCTGACCAGTTGCATACAGGTGCTCTTTAC
CTTCTAGCTGCTATATATTTGACTGGGGATGGCCTGAAGAAGGATATGGCCTCAGCATTA
TGGTGTTTCCATAAAGCATCGGAGAGGGGACATGCTGGCGCAGCTATAGTATATGGATCT
CTTCTTCTCAGAGGTGTTCAATTACCAGAATCTGTAACAAAATTGTACAAAACAGCAAGC
AAGAGTTCAGGAAGTGCTGTGCTAGATCCAGTAGAGATGGCAAAAGAACAGTTTCAGATT
GCTGCAAAAGCAGGGTGTGAGCTTGGATTCAAATGGCTGCAAAGACTTGAGGAGGAAGAG
AAGCGTTTACTGACCGAATGA

Peptide Sequence

PEP ID

VIT_11s0016g05080.t01
PEP Infomation

pep chromosome:12X:11:4363663:4373149:1 gene:VIT_11s0016g05080 transcript:VIT_11s0016g05080.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLGSLFAKTSLKPSALHLFQFNLQRGLHSRNKKAAEFLAQGFSAIKEVDRVMDKSEPNSR
LLIPLLRKAKENFELALEADNSNAHARYWLSKLHLKYHVPGACKAIGAALLVEAADMGDA
EAQYELGRRLRYENEYVQSGQQAFYYLEKAADQLHTGALYLLAAIYLTGDGLKKDMASAL
WCFHKASERGHAGAAIVYGSLLLRGVQLPESVTKLYKTASKSSGSAVLDPVEMAKEQFQI
AAKAGCELGFKWLQRLEEEEKRLLTE

Transcript Sequence

Transcript ID

VIT_11s0016g05080.t01
Transcript Infomation

cdna chromosome:12X:11:4363663:4373149:1 gene:VIT_11s0016g05080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAGCTCCTCTGACGCTCTCATATAAGCAGAAAAAGATGTTGGGGTCACTCTTTGCAAAGA
CTTCTCTGAAACCAAGCGCCCTTCACCTTTTCCAATTCAATCTACAGAGAGGTCTACATA
GTAGAAATAAGAAGGCTGCGGAGTTCTTAGCACAAGGGTTTAGTGCTATAAAGGAAGTTG
ACAGGGTCATGGATAAATCAGAGCCCAATAGCCGCCTTCTCATACCTCTCCTCAGGAAAG
CAAAGGAAAACTTTGAGTTAGCTCTGGAGGCTGACAACTCAAACGCCCATGCTAGGTATT
GGTTGTCCAAATTGCATCTCAAGTACCATGTCCCAGGGGCATGCAAAGCTATTGGAGCTG
CTTTGTTAGTGGAAGCTGCAGATATGGGTGATGCTGAAGCACAGTATGAATTGGGTCGTC
GTCTAAGATATGAGAATGAATATGTTCAGTCAGGACAACAAGCTTTCTATTACTTGGAGA
AGGCTGCTGACCAGTTGCATACAGGTGCTCTTTACCTTCTAGCTGCTATATATTTGACTG
GGGATGGCCTGAAGAAGGATATGGCCTCAGCATTATGGTGTTTCCATAAAGCATCGGAGA
GGGGACATGCTGGCGCAGCTATAGTATATGGATCTCTTCTTCTCAGAGGTGTTCAATTAC
CAGAATCTGTAACAAAATTGTACAAAACAGCAAGCAAGAGTTCAGGAAGTGCTGTGCTAG
ATCCAGTAGAGATGGCAAAAGAACAGTTTCAGATTGCTGCAAAAGCAGGGTGTGAGCTTG
GATTCAAATGGCTGCAAAGACTTGAGGAGGAAGAGAAGCGTTTACTGACCGAATGACACA
TCAACCACATGCCTCTACAGATATTCTCCCTCTTTTCTGAATGCCAAGAGAAAAGAAAAA
AAGAAAAAAGTATGAGCTCAGGATCAATTAAAGAGTGAAGTTACCATTTCTGATCAGAAT
TCAAAAATTGCTTTACCTTGTATTGAGAATAACTGCTAGGTATTAGCAACAGGACTTTGA
TTCATAAACCTACGATTTTCCATGTAAAA