Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g05050.t01
CDS Infomation

cds chromosome:12X:11:4345840:4350117:1 gene:VIT_11s0016g05050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACAGAGTCATTCAACCTCCTCTGGTTGATACAACAGCTTGTTTGTGTAGAGTTGAT
GCTGGCCTTAAAACTGTTGCTGGAGCAAAAAAATTTGTCCCTGGGACAAAGCTATGTCTT
CAGCCAGACATCAAACCTTCCATTCATCCAACCAGGCACAAGCCATCACGTGGTGACCGG
AGCCGGAGCCAATCCCCTCTACTTCCAGGGCTACCTGATGATCTTGCTATTGCTTGCTTA
ATCCGTGTCCCAAGAATTGAGCACCGTAAGCTCCGCCTAGTATGCAAAAGATGGTACCGC
CTTTTGGTTGGTAACTTCTATTACTCACTCCGAAAGAACCTTGGAATTGCTGAAGAATGG
ATATATGTCATAAAGAGAGACAGAGAAGGGAAAATCTCATGGCATGCCTTTGACCCCATA
TACCAGCTTTGGCAGCCCCTCCCTCCTGTCCCTAAAGAATATTCGGAGGCCCTAGGGTTT
GGTTGTGCTGTTCTCAGTGGCTGTCACCTCTACTTGTTTGGTGGCAAAGATCCCCTTAAG
GGATCAATGAGACGAGTCATTTTTTATAGTGCTCGGACTAACAAATGGCACCGAGCCCCA
GACATGCTTAGGCGACGACATTTCTTTGGTTCGTGTGTCATAAACAATTGCTTGTATGTA
GCAGGTGGCGAGAATGAGGGGATGCACCGATCCTTGAGATCAGCTGAAGTTTATGATCCC
AACAGGAACAGGTGGTCCTTTATTTCAGATATGAGCACAGCAATGGTGCCGTTCATTGGG
GTCGTTTATGAGGGCAAGTGGTTCTTGAAGGGGCTTGGGTCTCACCGGCAGGTTTTAAGT
GAGGTTTATCAACCAGAAACTGACAGCTGGTACCCGGTTTATGATGGAATGGTTGCAGGG
TGGAGAAATCCGAGTGCTTCCTTAAATGGGCAGCTTTATGCCTTGGATTGCAAGGATGGC
TGCAAACTTAGGGTTTATGATGAAGTGAGTGATTCCTGGAGCAAACATATTGACAGTAAG
ATGCACTTGGGGAATTCCCAGGCTCTGGAGGCAGCTGCGCTGGTGCCGCTTCACGGAAAA
TTGTGCATCATCAGGAACAATATGAGTATTTCCTTGGTTAATGTCTCTAAATCTGAAGAT
ATGACGGGGCCAACCGCTGAACATTTATGGGAAACCATTGCAGGAAGAGGGCAATTCAAG
ACACTGGTCACAAATCTTTGGTCCAGCCTTGCTGGCAGGAACCGCCTTAAAAGTCACATC
GTTCACTGCCAGGTTCTTCAAGCCTAA

Peptide Sequence

PEP ID

VIT_11s0016g05050.t01
PEP Infomation

pep chromosome:12X:11:4345840:4350117:1 gene:VIT_11s0016g05050 transcript:VIT_11s0016g05050.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDRVIQPPLVDTTACLCRVDAGLKTVAGAKKFVPGTKLCLQPDIKPSIHPTRHKPSRGDR
SRSQSPLLPGLPDDLAIACLIRVPRIEHRKLRLVCKRWYRLLVGNFYYSLRKNLGIAEEW
IYVIKRDREGKISWHAFDPIYQLWQPLPPVPKEYSEALGFGCAVLSGCHLYLFGGKDPLK
GSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVINNCLYVAGGENEGMHRSLRSAEVYDP
NRNRWSFISDMSTAMVPFIGVVYEGKWFLKGLGSHRQVLSEVYQPETDSWYPVYDGMVAG
WRNPSASLNGQLYALDCKDGCKLRVYDEVSDSWSKHIDSKMHLGNSQALEAAALVPLHGK
LCIIRNNMSISLVNVSKSEDMTGPTAEHLWETIAGRGQFKTLVTNLWSSLAGRNRLKSHI
VHCQVLQA

Transcript Sequence

Transcript ID

VIT_11s0016g05050.t01
Transcript Infomation

cdna chromosome:12X:11:4345840:4350117:1 gene:VIT_11s0016g05050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACACAGTCTTCCTTTAGAAAGCTTTATTTATTTGTTTCTCTCTATCTAAAACCAAGTACC
CAACAAGAGCTATCTTCCAATCTGAGTGTGATTTGGTGTTCAATTTATTCCAACAAACAA
CCACCATAATGTCATCATGCAAAAACCCATCTTTCTCTCCTCCTTTAATGGTTTAGGTTT
GCTTTTGCCTCTCTCTCTCTCTCTTCTTCAACACACTCTTGTGCTTGGTAGGTTGTGCCG
TTGAGGTGATGGGCCCTATACTCCACTGAAGATCAATGGTGAGAGGGGTCTCTATCTCCT
TCTTCAGTGCTTTCTTTCCCCCATTTCTTCACTGTCTAGCATTTGGGTCTTAGGTTTAAT
CCGAAGATAGGATTTCCCTTTTTTTATCTTCTGATTTCTCTCTTTTGAAACCATGGCCGG
TGATTCTCTGAGGTTTTTGCATATGGGCTGTTTGTTTCGGATATGGGTTTCAGAGACAAA
GTTATGGTAATGTTGGGTTTCTGTCGTAATCGCTCTTTGTATTCGGCGTATGGTTCCTTT
GCCTCTGGAGTAGACTCTGGTTTTTAGGTTGGTTTTGAGTTTATTCCGGAGTTGTTTGAG
GTGGGTTTTGGAAGATGGTGAGATTGTGAGCGAAGATTGAGAGAGGGTCGTGATTGTGGA
GGCAGGCTGGTGATGAATTTGGCACTGGACACTCCTTGAATGAAGAAAATGGACAGAGTC
ATTCAACCTCCTCTGGTTGATACAACAGCTTGTTTGTGTAGAGTTGATGCTGGCCTTAAA
ACTGTTGCTGGAGCAAAAAAATTTGTCCCTGGGACAAAGCTATGTCTTCAGCCAGACATC
AAACCTTCCATTCATCCAACCAGGCACAAGCCATCACGTGGTGACCGGAGCCGGAGCCAA
TCCCCTCTACTTCCAGGGCTACCTGATGATCTTGCTATTGCTTGCTTAATCCGTGTCCCA
AGAATTGAGCACCGTAAGCTCCGCCTAGTATGCAAAAGATGGTACCGCCTTTTGGTTGGT
AACTTCTATTACTCACTCCGAAAGAACCTTGGAATTGCTGAAGAATGGATATATGTCATA
AAGAGAGACAGAGAAGGGAAAATCTCATGGCATGCCTTTGACCCCATATACCAGCTTTGG
CAGCCCCTCCCTCCTGTCCCTAAAGAATATTCGGAGGCCCTAGGGTTTGGTTGTGCTGTT
CTCAGTGGCTGTCACCTCTACTTGTTTGGTGGCAAAGATCCCCTTAAGGGATCAATGAGA
CGAGTCATTTTTTATAGTGCTCGGACTAACAAATGGCACCGAGCCCCAGACATGCTTAGG
CGACGACATTTCTTTGGTTCGTGTGTCATAAACAATTGCTTGTATGTAGCAGGTGGCGAG
AATGAGGGGATGCACCGATCCTTGAGATCAGCTGAAGTTTATGATCCCAACAGGAACAGG
TGGTCCTTTATTTCAGATATGAGCACAGCAATGGTGCCGTTCATTGGGGTCGTTTATGAG
GGCAAGTGGTTCTTGAAGGGGCTTGGGTCTCACCGGCAGGTTTTAAGTGAGGTTTATCAA
CCAGAAACTGACAGCTGGTACCCGGTTTATGATGGAATGGTTGCAGGGTGGAGAAATCCG
AGTGCTTCCTTAAATGGGCAGCTTTATGCCTTGGATTGCAAGGATGGCTGCAAACTTAGG
GTTTATGATGAAGTGAGTGATTCCTGGAGCAAACATATTGACAGTAAGATGCACTTGGGG
AATTCCCAGGCTCTGGAGGCAGCTGCGCTGGTGCCGCTTCACGGAAAATTGTGCATCATC
AGGAACAATATGAGTATTTCCTTGGTTAATGTCTCTAAATCTGAAGATATGACGGGGCCA
ACCGCTGAACATTTATGGGAAACCATTGCAGGAAGAGGGCAATTCAAGACACTGGTCACA
AATCTTTGGTCCAGCCTTGCTGGCAGGAACCGCCTTAAAAGTCACATCGTTCACTGCCAG
GTTCTTCAAGCCTAAACACTGTAAAACTATATTTGTAGCGGAAAGGAAAGGAAAGGAAAG
GAAGAATGGCTCTGAGGTTTCTCACTCCTCTCTCTTGAACTTTTGATCTGATTGACAGTG
GCGTGCATGTAAAGGCCAGAAAATTCCCAGTTTGACAGCTGCAATTGATGCACATGAGTC
CATTGTTGTAGGGTGTATAAGTTGAAGTTAAACAATCATTATATCATGTGCCACAGCAGG
TGCTGGGTCAGTGAGAATATTTATTTTGCTTGGGTGGTGTAGACGTTAGTGTTACAAATA
TTTATATGATACACAGTCGTTACATTACATGTTCTGAAAATGGAAGATCATGTCATCCAA