Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g05010.t01
CDS Infomation

cds chromosome:12X:11:4317123:4320498:-1 gene:VIT_11s0016g05010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGGAAGAGCGGAGAATCCTCTGCGTCTTAAGTCTGTGAATCATATCTCACTTGTG
TGTAGATCAGTTGAGAAATCTCTTGATTTCTATCAGAAGGTTCTTGGGTTCTTTTCCATC
AGGAGGCCTGGCTCCTTTGATTTTGATGGTGCATGGTTATACAATTATGGCATGGGCATA
CATCTCCTGCAATCTGAAGACCCTGACAACATGCCCAAGATCAGCCAGCAGATTAATCCC
AAGGACAACCACATTTCATTTCAATGTGAAAGCATGGCAACAGTGGAGAAAAAGCTTAAG
GAGATGAAGATAGAGTACGTGCAGAGTAGGGTGGAGGAGGGTGGAATCTGCGTTGATCAA
CTCTTCTTCCACGATCCTGATGGCTCCATGATCGAGATCTGCAACTGCGACAACCTCCCT
GTGATACCGCTAGGCGGTGGCGGTGGAGACACCACGTTATGCTCGCGTATCAACTGCAAT
GTCCAACAACAGCAACAGCTGCAACTGGCTGCAGGGCAGATTAAGCAGCAGCAAGTTACA
TGTCTGCCTTCCATTCCCATCAATGAAGAGTATCTCCCTTGTGCTTGA

Peptide Sequence

PEP ID

VIT_11s0016g05010.t01
PEP Infomation

pep chromosome:12X:11:4317123:4320498:-1 gene:VIT_11s0016g05010 transcript:VIT_11s0016g05010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEGRAENPLRLKSVNHISLVCRSVEKSLDFYQKVLGFFSIRRPGSFDFDGAWLYNYGMGI
HLLQSEDPDNMPKISQQINPKDNHISFQCESMATVEKKLKEMKIEYVQSRVEEGGICVDQ
LFFHDPDGSMIEICNCDNLPVIPLGGGGGDTTLCSRINCNVQQQQQLQLAAGQIKQQQVT
CLPSIPINEEYLPCA

Transcript Sequence

Transcript ID

VIT_11s0016g05010.t01
Transcript Infomation

cdna chromosome:12X:11:4317123:4320498:-1 gene:VIT_11s0016g05010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTCTTCTCCTTGATACCATTTCTAGCTTCCTTTTCTCGTGTTTTCTTTGTTTAATTATTG
AAGAGGATGGAGGGAAGAGCGGAGAATCCTCTGCGTCTTAAGTCTGTGAATCATATCTCA
CTTGTGTGTAGATCAGTTGAGAAATCTCTTGATTTCTATCAGAAGGTTCTTGGGTTCTTT
TCCATCAGGAGGCCTGGCTCCTTTGATTTTGATGGTGCATGGTTATACAATTATGGCATG
GGCATACATCTCCTGCAATCTGAAGACCCTGACAACATGCCCAAGATCAGCCAGCAGATT
AATCCCAAGGACAACCACATTTCATTTCAATGTGAAAGCATGGCAACAGTGGAGAAAAAG
CTTAAGGAGATGAAGATAGAGTACGTGCAGAGTAGGGTGGAGGAGGGTGGAATCTGCGTT
GATCAACTCTTCTTCCACGATCCTGATGGCTCCATGATCGAGATCTGCAACTGCGACAAC
CTCCCTGTGATACCGCTAGGCGGTGGCGGTGGAGACACCACGTTATGCTCGCGTATCAAC
TGCAATGTCCAACAACAGCAACAGCTGCAACTGGCTGCAGGGCAGATTAAGCAGCAGCAA
GTTACATGTCTGCCTTCCATTCCCATCAATGAAGAGTATCTCCCTTGTGCTTGATATGGA
TGGAAGGTGGGGGCCTCAGAAGTGTCCAATAGCTTAGGTGTGTTTCAATTTTTGGAACAA
ATATTTATGTGTGTAAAGTAATATTATCAGAATTAGGCTGCAAAATTTCTAATCTGCATA
ATTCAGGACCTTCCTGTGTCGGGTGAAAGCATCATAGATAAATGTTTCAAGATTATCTTC
AACCAAGTATTGCAGTGTAATCCTTCAAAGCCGGCAAATGCCATGCTGACTGATTCTGGC
TTCCTGATTTTTAGACTCCAATTTCAGACTTCTCGAGCAAACACTAACGTTATCTGGTTT
AACAATATCATTCATCTACTAGCTAGATTCCCATATTCTAATCTCAACAAGCTTAATTTC
TGAAAGCAAACATAATCGTGGGCCATGCAGGCGTGCAAAAAAAATGGAAAAAAAATCATT
GTTTCTCATAAGATATTCCATGTTTTCAACAAATTAAGCAACAGAAATTTGGAACTTACC
CCTTAGATATATCCAATCCTCCAAGATAGCAAACACTCTCTAGGCATATATATATATGTA
TATTGGTTAATAGTTTCCAGCCTTGAAAGCCATTAGAGAAGGAAAAGAGAAGAACTAGGA
GCTCCCTTCAGTCCAAAACAAGGAGCATGAAGTTCATCATCTTCTTCAGCGATGGAGTTG
TTTTGGGCTGCAAAGGAACCCCCATTTCTGCAGTTTTCTTGACAATTAAGCTCATGGAAA
AAAGGAGAAAGATAGTGAGAGGAGAACAAAGGGAGAAAACAAGACGAGAAGGCGCATCCA
TAGTGAAAGTTGT