Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g04980.t01
CDS Infomation

cds chromosome:12X:11:4296131:4304338:1 gene:VIT_11s0016g04980 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGATGAGTTACAGAAGCGCAACACTGATTGCGTCTACTTCTTGGCCTCTCCTCTC
ACTTGCAAGAAGGGAATGGATTGTGAGTATCGGCACAGTGAGGGTGCAAGGCTCAACCCA
CGGGATTGTTGGTATTGGTTGAGTGGGAGCTGTCTGAATCCAGCCTGTGCTTTTCGACAT
CCTCCATTGGATGGGCATATTGAAGCATCATCTGAGCCTGTCACTTTGTCACATCACTCC
TCCGTACCCGTGAACAAGACCAATACCCCTTGTTATTTTTACTACAATGGGTTTTGCAAT
AAAGGCGAAAGATGCTCCTTTTTGCATGGTCCTGACAGTAGTGCACCTGCTTGGAAATCC
TTAAAGACAGCGTCTGAGGTCAATGATATGCGCCCTCCAGAAAATAATACAATAGCAGGA
ACTGAGACAGGGCCAACACTAATAGGAAGACGGCCTAATTCAGTAGAAACTGCCACAGTC
ACAGCAATTGAAACACAGTTTCAGCCTAAAGAGGATCTTCAGAAATTGGTCTTTAAGAAT
GCTTTTGAACAAAGTTCATCTCCACAGATATCAATGTCTGAGTATGAAGAAGCTGCAGCA
GTCAGGTCAGATTCCTTGCTTCCAGCTGAAGGCTTTAATCAAAGCAGATCTCTTCTAAGC
ACAGATCAGAGTTCAGAGGAGCAAGTGGATGGCCCCATTGAACCAGAAGAGCGCTGGGAA
TCATCCCCAGGTTTTGATGTTCTTGTGGATAATATTTCAGAGAATTTGGTTTACGAGGAT
GAACCTGAGTACTTACTGGCTCTTGAAGGAGAAGGCAGGGAGCTGAACGGTCAATTCTTG
GGTTATGATTTTGAAGACCCAGTTGAATATGATCTCATGTACCCAGAAGCTGAAATTTTG
TATGACCACAGGATATATGATTCTTTTGATTGTTTGGACAATGAGCATAGTTCTGATCAT
GTAAGAAATATTCCTGGGTGCTCTAGGGAGAGAATTTTGGATCCTATTTTGCCCCGGAAA
AGGAAAAATTTTCCAGTGGAACTAGCAGTAACTGGAAGGAGTGGTCTTGATCTTCGAGAC
CGACTGAGAAAACGTCGGGTAACTGATGGTCACACGGTTACCCGTTTCTCAAGAAGGCAT
GATTCATCTTGTCTGATTGGTCGAACCAGAGAAAGGCGTCGAAGGCATGGTATGGACCAG
CAGCTGCAAGGAAGATCTGCATCAGAAGTCAGAAAAAACATTATTGGAATGCTCAGTGAG
AATGAAACTCTTTCAAATCGTGGGAACAAGCAAGGTTGGGTTAGACGCTCTCGCCTACCC
AAGTCTCGGCAGCATTACAAGGAAAAAGGGCACTCCCAAAGGCAGCATATTTCATCTGAA
GACTCAAGGAAACCAGTTTCAAGAGAGAGAATATCTACTCGAGAATATACTACATTTACA
GGACCTAAGTCCCTTGCCCAGATTAAGGAAGAGAAGAGGAAAGCTGAAGAAAATGGAGAG
GGCTTTGGGAAAATGGGATATTCAAGCAATACCCCATCCGCAGATTTCCAGGGTCCCAAA
CCTTTGAGTGAAATCCTCAAGGACAAAAGAAAGCTGGGTTCAGCGATGGATGGCAATATT
ATCAGCAGCTAA

Peptide Sequence

PEP ID

VIT_11s0016g04980.t01
PEP Infomation

pep chromosome:12X:11:4296131:4304338:1 gene:VIT_11s0016g04980 transcript:VIT_11s0016g04980.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEDELQKRNTDCVYFLASPLTCKKGMDCEYRHSEGARLNPRDCWYWLSGSCLNPACAFRH
PPLDGHIEASSEPVTLSHHSSVPVNKTNTPCYFYYNGFCNKGERCSFLHGPDSSAPAWKS
LKTASEVNDMRPPENNTIAGTETGPTLIGRRPNSVETATVTAIETQFQPKEDLQKLVFKN
AFEQSSSPQISMSEYEEAAAVRSDSLLPAEGFNQSRSLLSTDQSSEEQVDGPIEPEERWE
SSPGFDVLVDNISENLVYEDEPEYLLALEGEGRELNGQFLGYDFEDPVEYDLMYPEAEIL
YDHRIYDSFDCLDNEHSSDHVRNIPGCSRERILDPILPRKRKNFPVELAVTGRSGLDLRD
RLRKRRVTDGHTVTRFSRRHDSSCLIGRTRERRRRHGMDQQLQGRSASEVRKNIIGMLSE
NETLSNRGNKQGWVRRSRLPKSRQHYKEKGHSQRQHISSEDSRKPVSRERISTREYTTFT
GPKSLAQIKEEKRKAEENGEGFGKMGYSSNTPSADFQGPKPLSEILKDKRKLGSAMDGNI
ISS

Transcript Sequence

Transcript ID

VIT_11s0016g04980.t01
Transcript Infomation

cdna chromosome:12X:11:4296131:4304338:1 gene:VIT_11s0016g04980 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAAAATGGAGGATGAGTTACAGAAGCGCAACACTGATTGCGTCTACTTCTTGGCCTCTCC
TCTCACTTGCAAGAAGGGAATGGATTGTGAGTATCGGCACAGTGAGGGTGCAAGGCTCAA
CCCACGGGATTGTTGGTATTGGTTGAGTGGGAGCTGTCTGAATCCAGCCTGTGCTTTTCG
ACATCCTCCATTGGATGGGCATATTGAAGCATCATCTGAGCCTGTCACTTTGTCACATCA
CTCCTCCGTACCCGTGAACAAGACCAATACCCCTTGTTATTTTTACTACAATGGGTTTTG
CAATAAAGGCGAAAGATGCTCCTTTTTGCATGGTCCTGACAGTAGTGCACCTGCTTGGAA
ATCCTTAAAGACAGCGTCTGAGGTCAATGATATGCGCCCTCCAGAAAATAATACAATAGC
AGGAACTGAGACAGGGCCAACACTAATAGGAAGACGGCCTAATTCAGTAGAAACTGCCAC
AGTCACAGCAATTGAAACACAGTTTCAGCCTAAAGAGGATCTTCAGAAATTGGTCTTTAA
GAATGCTTTTGAACAAAGTTCATCTCCACAGATATCAATGTCTGAGTATGAAGAAGCTGC
AGCAGTCAGGTCAGATTCCTTGCTTCCAGCTGAAGGCTTTAATCAAAGCAGATCTCTTCT
AAGCACAGATCAGAGTTCAGAGGAGCAAGTGGATGGCCCCATTGAACCAGAAGAGCGCTG
GGAATCATCCCCAGGTTTTGATGTTCTTGTGGATAATATTTCAGAGAATTTGGTTTACGA
GGATGAACCTGAGTACTTACTGGCTCTTGAAGGAGAAGGCAGGGAGCTGAACGGTCAATT
CTTGGGTTATGATTTTGAAGACCCAGTTGAATATGATCTCATGTACCCAGAAGCTGAAAT
TTTGTATGACCACAGGATATATGATTCTTTTGATTGTTTGGACAATGAGCATAGTTCTGA
TCATGTAAGAAATATTCCTGGGTGCTCTAGGGAGAGAATTTTGGATCCTATTTTGCCCCG
GAAAAGGAAAAATTTTCCAGTGGAACTAGCAGTAACTGGAAGGAGTGGTCTTGATCTTCG
AGACCGACTGAGAAAACGTCGGGTAACTGATGGTCACACGGTTACCCGTTTCTCAAGAAG
GCATGATTCATCTTGTCTGATTGGTCGAACCAGAGAAAGGCGTCGAAGGCATGGTATGGA
CCAGCAGCTGCAAGGAAGATCTGCATCAGAAGTCAGAAAAAACATTATTGGAATGCTCAG
TGAGAATGAAACTCTTTCAAATCGTGGGAACAAGCAAGGTTGGGTTAGACGCTCTCGCCT
ACCCAAGTCTCGGCAGCATTACAAGGAAAAAGGGCACTCCCAAAGGCAGCATATTTCATC
TGAAGACTCAAGGAAACCAGTTTCAAGAGAGAGAATATCTACTCGAGAATATACTACATT
TACAGGACCTAAGTCCCTTGCCCAGATTAAGGAAGAGAAGAGGAAAGCTGAAGAAAATGG
AGAGGGCTTTGGGAAAATGGGATATTCAAGCAATACCCCATCCGCAGATTTCCAGGGTCC
CAAACCTTTGAGTGAAATCCTCAAGGACAAAAGAAAGCTGGGTTCAGCGATGGATGGCAA
TATTATCAGCAGCTAAAATGTAATCATTTTGACTTTGAGAGGATTGTAGCCATTTAGTGG
AAACTTTGAACAAATTTGTAGAAGATGATGATGTCAATCAGCCTGAGAAGCCTTCTAGCA
TGTTCTCATTTTTTTTTTTGAGCTCATATCTGCTGGCTTCCTGGTATTTCCTACTACTAG
ATGAAGACCATCAAGCTTCCTGCTAGTAGTGAAACAACGGAAGCCTTGAGATGCTCACCA
GCCTTTGTTTTGGATATTCAAGATCCCTCCTGTCCCCCCAAAACAACCTCATTTAGTGAA
TGAGAAGCGTAACCTAGAGCAGGCTAATTTTGCTTATTGAGCTTGCTGATATTTCCTGTA
TAGAAATGCTTTTATCAGTTCTCACATTTGTGTTGAGAAAACCATGTCCGTTGCAATGCT
TGTGATGTGTGACAATGATGTATCTTCAAAGACTATGAACCGAGGCTCTTATCACATTTT
TCTTTATGGATTTGCCTATCCCACCCAATTAGCTATTAGACAAAGAATGAGCCGGAGACA
TTGACGTAAGCTTAACCAAGACACTGTAATTTCCAGTCGCGACGGAATTAAATTATATCG
TAGA