Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g04940.t01
CDS Infomation

cds chromosome:12X:11:4251587:4256013:1 gene:VIT_11s0016g04940 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAATCCAAGGATACATCCACCAAATGCTCCAACCAGTAGAGGGACAAGCAATATTTTC
TTCAAGACCCGGATATGTGCTAAATTTAAACTGGGTCAATGCCGGAATGGTGAGAACTGC
AACTTTGCCCATGGTATGGAAGATATGCGCCAACCTCCACCCAACTGGCAAGAACTTGTT
AATGTTGGTGGCCGTGAAGAAGAACGGGGGACAAAGATTTGGGATGAGGACCAGAGGATA
ATTCATAAGATGAAGCTGTGCAAGAAGTTCTATAATGGTGAAGAATGTCCATATGGGGAC
AGGTGCAATTTTCTTCATGAAGATCCAAAGAAGTTTAGGGATGATTCAGCGAGGCCTAGG
GAGAGCTTTGCAATAAGCATTGGAACTACAGGGCCTCCAATGGAGCATGGAAGTGGTTCT
AATCTTGGTTCTAACCTCAGTTCTAATCTCAGTTCTATGAATTCTGGTTTGGATCCTTTC
AGAGGAAATGTGAAGCCTACATATTGGAAGACAAAGCTTTGCTGTAAGTGGGAAACCACT
GGTCACTGCCCTTTCGGGGAGAAATGTCACTTTGCTCATGGGCAAGCTGAGCTACAGATG
ACTGGTGGTGGTGGTGGTGGTGGTGGCTGGGCTGAAGCTGAAGTGGGGAACACATGCTCC
TTGCCTGCAAAGCTTCCCTCTGTTCCTGCTAATGTCTCAACTCCTCCTGAGTTGGGTACT
GGGGCTCCTATCAATCCAGAAAGACAGAACAAGAAGCTATTACTGCAGTCAAAAGGATTC
AAGAAGATCAATCGAATTTATGCTGATTGGATTGATGATCTGCCATCATTGAACAACAAA
GTGAAGGACTGA

Peptide Sequence

PEP ID

VIT_11s0016g04940.t01
PEP Infomation

pep chromosome:12X:11:4251587:4256013:1 gene:VIT_11s0016g04940 transcript:VIT_11s0016g04940.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MNPRIHPPNAPTSRGTSNIFFKTRICAKFKLGQCRNGENCNFAHGMEDMRQPPPNWQELV
NVGGREEERGTKIWDEDQRIIHKMKLCKKFYNGEECPYGDRCNFLHEDPKKFRDDSARPR
ESFAISIGTTGPPMEHGSGSNLGSNLSSNLSSMNSGLDPFRGNVKPTYWKTKLCCKWETT
GHCPFGEKCHFAHGQAELQMTGGGGGGGGWAEAEVGNTCSLPAKLPSVPANVSTPPELGT
GAPINPERQNKKLLLQSKGFKKINRIYADWIDDLPSLNNKVKD

Transcript Sequence

Transcript ID

VIT_11s0016g04940.t01
Transcript Infomation

cdna chromosome:12X:11:4251587:4256013:1 gene:VIT_11s0016g04940 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GATTTTGGATGGCAATTAGGTTTCCATATGGCGGCTAGGGTTTTAGATTATCATCCGAAC
TCTCCTGCCGCCTTAGAGTATATAACTTCCATTCCGGATGAAGTCCAGGTTTATTTTCAG
ATTTATACGTAAAAGTTTTGAACTTTGGTCATTCCTTTTGCGGTCTCTTTGTAAAATTCA
GTATCGGTTTTTGATTTCTTAATTTGCCTTTTAGGACCGATAAAGTCATCTGGGTATTCT
TGGTTTCTCTATAAGAATAGGTTTTTATAGCCCTAAAACCTATCCTGGTGTTCTTGATTC
TCTGAATTTTCTTTGATCAAAGTTCTTATACAGGTTTTCTGAGCAATACTGATAGCAGCT
ATTTTGCCCAAAGAGTCATCATTGATTATCTCTTGAATAAAAACTGAATTTATTCCAGGC
CTAGAATTCACAGATATGAGTTTTCCTGATTCCCGTGCTCTGGTTGCGCCACCATTGCAT
CCTTTTCCTGTTGGGGATGATGACATTGGTTCCTGGTCTCAGTTCCCAATGAACAATGAA
GAATATGAGGTGCATTCACATTTTGAATACCCTCCTCACAAGAGGACTAGAAATTCTGAA
GGCCAGATGCCAAATTCATCACCTCACCCATCCATGAATCCAAGGATACATCCACCAAAT
GCTCCAACCAGTAGAGGGACAAGCAATATTTTCTTCAAGACCCGGATATGTGCTAAATTT
AAACTGGGTCAATGCCGGAATGGTGAGAACTGCAACTTTGCCCATGGTATGGAAGATATG
CGCCAACCTCCACCCAACTGGCAAGAACTTGTTAATGTTGGTGGCCGTGAAGAAGAACGG
GGGACAAAGATTTGGGATGAGGACCAGAGGATAATTCATAAGATGAAGCTGTGCAAGAAG
TTCTATAATGGTGAAGAATGTCCATATGGGGACAGGTGCAATTTTCTTCATGAAGATCCA
AAGAAGTTTAGGGATGATTCAGCGAGGCCTAGGGAGAGCTTTGCAATAAGCATTGGAACT
ACAGGGCCTCCAATGGAGCATGGAAGTGGTTCTAATCTTGGTTCTAACCTCAGTTCTAAT
CTCAGTTCTATGAATTCTGGTTTGGATCCTTTCAGAGGAAATGTGAAGCCTACATATTGG
AAGACAAAGCTTTGCTGTAAGTGGGAAACCACTGGTCACTGCCCTTTCGGGGAGAAATGT
CACTTTGCTCATGGGCAAGCTGAGCTACAGATGACTGGTGGTGGTGGTGGTGGTGGTGGC
TGGGCTGAAGCTGAAGTGGGGAACACATGCTCCTTGCCTGCAAAGCTTCCCTCTGTTCCT
GCTAATGTCTCAACTCCTCCTGAGTTGGGTACTGGGGCTCCTATCAATCCAGAAAGACAG
AACAAGAAGCTATTACTGCAGTCAAAAGGATTCAAGAAGATCAATCGAATTTATGCTGAT
TGGATTGATGATCTGCCATCATTGAACAACAAAGTGAAGGACTGAGTTCAAGTTATGCCT
GGAATTTTGCACATGAGCATTTAAAATTTGATTAAGAAGTTCAAGTTCTGCTTCCAGATC
TTCACATATTTGACCATGAAGGCGGTTCAGATGCATGGAGAACTGGAAGATACATTCTTC
CCTTCTCCCCTTATCCTTTCAATCATTGGGTCATTGGTGGGTGTTAATTTGGTCACATAG
GTATTTCAGTTTTAGATCTCTTTCCTTGTAAGCCTTCATTAATCAAAGATGTGGTATAAT
TTTTCAATTTGGAAACAGTAT