Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g04870.t01
CDS Infomation

cds chromosome:12X:11:4184983:4188652:-1 gene:VIT_11s0016g04870 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCAAAGGATAGAAGAGATCGGTCTGTGTCTTTTGATAGATACAGGGCATCTCCTTTC
CCTTGTAGCTCCAGTCGTGGAAAACGATCTTCACCCAAAAAATCTTCAGAAACCGAGAAG
GAAGTGAAAGAATGGGAAGATGCTAGGTGCCCTGTCTGCATGGAACATCCTCACAATGCT
GTTCTTCTCTTGTGTTCTTCCAATGACAAGGGCTGTAGACCTTACATGTGTGACACCAGC
TATCGCCACTCCAATTGTCTTGATCAGTTCCGCAAGTCATTTTCAGAATCCTCCTCAACA
GTACCACTGCAAGAAGAAATGCCACCCTCAGACACACAGTTGTCCCCCATGGTGACTTCA
GAAGCAACAGATGTCGATTTGCATGGAGAGAGGAGTGAGGAAGGTCCCTTCACCATGCAT
ACCATGTCTTGTGAGAATAAGACCCAGCCCAAGCTGGTGTGCCCTCTCTGTCGGGGGCAG
ATTAATGGTTGGACTGTTGTGGAGCCTGCTCGTCATTTCATGAATGCTAAATCAAGAAGC
TGTGCTTGTGAGACTTGTGATTTTAGTGGTACATATACGGATCTCAGGAAGCATGCAAGG
CTAGAGCACCCCCTTGTGCGGCCATCAGAAGCTGACCCAGAACGGCAGCGTAACTGGAGA
AGAATGGAGCGACAGAGGGATCTTGGAGATTTGCTTAGCACACTTCAATCTTCATTTGGA
GAAGAAAGGGGTGATGACAGCATTCTTCCAATTGATGAAGGTGGTTGGCTGACTGTATTT
TTCCTTATTAGAGTTTTCCGTCCTAGTTCTAGTTCAAGGAGCAGCAGCTGGTCTGGTACC
TCCAGAGCCAGAGCTCAACTGACTATCAGAAGGAGGTCTACAAGACTCTGGGGGGAGAGC
TATGAGGCAGAAAGTGGCTCTGCTTCCAGAGATGAGGATAACGAGTCTTCTGATGGTGGA
TCAGGTCCTTGGAGGCATGCCCGACCCCAGCGAAGGACAACACCAGACAACGAGCCATGA

Peptide Sequence

PEP ID

VIT_11s0016g04870.t01
PEP Infomation

pep chromosome:12X:11:4184983:4188652:-1 gene:VIT_11s0016g04870 transcript:VIT_11s0016g04870.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPKDRRDRSVSFDRYRASPFPCSSSRGKRSSPKKSSETEKEVKEWEDARCPVCMEHPHNA
VLLLCSSNDKGCRPYMCDTSYRHSNCLDQFRKSFSESSSTVPLQEEMPPSDTQLSPMVTS
EATDVDLHGERSEEGPFTMHTMSCENKTQPKLVCPLCRGQINGWTVVEPARHFMNAKSRS
CACETCDFSGTYTDLRKHARLEHPLVRPSEADPERQRNWRRMERQRDLGDLLSTLQSSFG
EERGDDSILPIDEGGWLTVFFLIRVFRPSSSSRSSSWSGTSRARAQLTIRRRSTRLWGES
YEAESGSASRDEDNESSDGGSGPWRHARPQRRTTPDNEP

Transcript Sequence

Transcript ID

VIT_11s0016g04870.t01
Transcript Infomation

cdna chromosome:12X:11:4184983:4188652:-1 gene:VIT_11s0016g04870 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGAAGAAACCCTAGAAAGCTGCCTCTTAGCTTTCTTGCTTCACCCTCCGAAATTTGATT
TCCTCTTAGGGTTTCTTGATCTTCTCAACCTAAATCGAATTGGAAGTGAGTTATATTTCT
TTTGAAGAGGCAAAGAAAGATTGAATTTTTTTGATCGACCTGTTGGAGTTGTGCTGCTGC
ATTTGGGAAGGAGTTGGTAGTCTTAGTTTTTTGCTGATATTTTCGACATCTGAACATGCC
AAAGGATAGAAGAGATCGGTCTGTGTCTTTTGATAGATACAGGGCATCTCCTTTCCCTTG
TAGCTCCAGTCGTGGAAAACGATCTTCACCCAAAAAATCTTCAGAAACCGAGAAGGAAGT
GAAAGAATGGGAAGATGCTAGGTGCCCTGTCTGCATGGAACATCCTCACAATGCTGTTCT
TCTCTTGTGTTCTTCCAATGACAAGGGCTGTAGACCTTACATGTGTGACACCAGCTATCG
CCACTCCAATTGTCTTGATCAGTTCCGCAAGTCATTTTCAGAATCCTCCTCAACAGTACC
ACTGCAAGAAGAAATGCCACCCTCAGACACACAGTTGTCCCCCATGGTGACTTCAGAAGC
AACAGATGTCGATTTGCATGGAGAGAGGAGTGAGGAAGGTCCCTTCACCATGCATACCAT
GTCTTGTGAGAATAAGACCCAGCCCAAGCTGGTGTGCCCTCTCTGTCGGGGGCAGATTAA
TGGTTGGACTGTTGTGGAGCCTGCTCGTCATTTCATGAATGCTAAATCAAGAAGCTGTGC
TTGTGAGACTTGTGATTTTAGTGGTACATATACGGATCTCAGGAAGCATGCAAGGCTAGA
GCACCCCCTTGTGCGGCCATCAGAAGCTGACCCAGAACGGCAGCGTAACTGGAGAAGAAT
GGAGCGACAGAGGGATCTTGGAGATTTGCTTAGCACACTTCAATCTTCATTTGGAGAAGA
AAGGGGTGATGACAGCATTCTTCCAATTGATGAAGGTGGTTGGCTGACTGTATTTTTCCT
TATTAGAGTTTTCCGTCCTAGTTCTAGTTCAAGGAGCAGCAGCTGGTCTGGTACCTCCAG
AGCCAGAGCTCAACTGACTATCAGAAGGAGGTCTACAAGACTCTGGGGGGAGAGCTATGA
GGCAGAAAGTGGCTCTGCTTCCAGAGATGAGGATAACGAGTCTTCTGATGGTGGATCAGG
TCCTTGGAGGCATGCCCGACCCCAGCGAAGGACAACACCAGACAACGAGCCATGACTGTG
AAGAAATTTATTATCTCTTTGGTTACATTTTGTTTAAGGGGGGGTTCATGGGTGAGTGGC
AGCAGTAGTCTTTCTAAGGTTGCTGTTGGTCTCATACGTATGACCCAATTGTTTGTATTG
TGTTTCAGGTGGAACAAGGAGGGAAGAAAAAATCAAAGAAATGCAAGATCTTTTGCTTGT
GCTTCAGAAACCATTCCTCCAGTGTGTGGAATGGTTCTCTTGCTTACTAGAAATCACAGA
AATGGGTATCAAAGGAGTGAACAAATTGTAATTTTTTTTCCTTTAAAGAAGCTTGAATCT
AGTCCAGAAGCATTTCTTCAGGATGTCCTTTCTTTTGCTTTTTGCTCAAAATACTTCCGT
AATTGTTTGTATTTGGAACTGGTAAAGGTTGAATTAGTTTCACAATCGTTGGTTCCACAA
TA