Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g04830.t01
CDS Infomation

cds chromosome:12X:11:4124624:4146076:-1 gene:VIT_11s0016g04830 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTCTCCGATCGAGTTCGTATGGACGCTTACTACAACGCCATTTTCGAGAACAAGCAC
CACTTCCGCGGAAAGAAGGCTGTGTTGGATGTAGGAACTGGGAGTGGCATTCTTGCAATC
TGGTCAGCACAAGCAGGTGCAAGGAAGGTCTATGCAGTGGAAGCAACTAAGATGTCAGAA
CATGCTCGTGAACTGGTTAAGGCAAATAATCTTCAAGATATTGTTGAAGTGATTGAAGGC
TCTGTGGAGGATGTTACACTGCCAGAGAAAGTTGATGTCATTATATCAGAATGGATGGGA
TATTTTCTTCTGCGTGAATCTATGTTTGATTCAGTGATTTCTGCACGTGATCGCTGGTTG
AAGCCAACTGGAGTTATGTATCCTAGTCATGCTCGCATGTGGATGGCACCTATCAGGTCT
GGATTGGTAGATCAAAAAAAGAATGATTATGAAGGATCTATGAATGACTGGCTTTGCTTT
GTGAACGAGACTAAAAATGATTATGGTGTTGATATGAGCGTTCTAACAAAGCCTTTCTCT
GAAGAGCAGAGGAAATATTATCTACAGACATCATTGTGGAACAACCTTCATCCACATCAA
GTTGTAGGAACTGCTGCCATCATAAAGGAGATTGATTGTTTAACGGCAACTGTGGATGAC
ATCTGTGAAGTTAGATCAAACTTTTCATCATCAATTTTGATAGAGAACACTAGGCTCTGT
GGGTTTGGTGGATGGTTTGATGTCCATTTTCGAGGAAGGAGTGATAATCCAGCTCAACAG
GAGATTGAGTTGACAACTGCTCCCAGTCTAGATTCTAGCACCCATTGGGGACAGCAGGTT
TTCCTCTTGCATCCTCCTTTTCGCACCAGTGAAGGGGATGATGTGAATGTTTCTTTCTTA
ATGAATCGCTCTAAAGAAAACCATCGACTGATGGAGGTTGATCTCGGTTGCGAGATAAGG
CAGTCTTCGGGAAAACTTCTTCCACTTTTCAAAAACAAGTTCTATATAGAATGA

Peptide Sequence

PEP ID

VIT_11s0016g04830.t01
PEP Infomation

pep chromosome:12X:11:4124624:4146076:-1 gene:VIT_11s0016g04830 transcript:VIT_11s0016g04830.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLSDRVRMDAYYNAIFENKHHFRGKKAVLDVGTGSGILAIWSAQAGARKVYAVEATKMSE
HARELVKANNLQDIVEVIEGSVEDVTLPEKVDVIISEWMGYFLLRESMFDSVISARDRWL
KPTGVMYPSHARMWMAPIRSGLVDQKKNDYEGSMNDWLCFVNETKNDYGVDMSVLTKPFS
EEQRKYYLQTSLWNNLHPHQVVGTAAIIKEIDCLTATVDDICEVRSNFSSSILIENTRLC
GFGGWFDVHFRGRSDNPAQQEIELTTAPSLDSSTHWGQQVFLLHPPFRTSEGDDVNVSFL
MNRSKENHRLMEVDLGCEIRQSSGKLLPLFKNKFYIE

Transcript Sequence

Transcript ID

VIT_11s0016g04830.t01
Transcript Infomation

cdna chromosome:12X:11:4124624:4146076:-1 gene:VIT_11s0016g04830 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGTCGGTAGAGTGAGTAAAATGGGAAGCTCTGCGCCCGGCGTCGCCGGCGATCGAACGGC
CAGCATAAATGGCGGTGGCGCCACTGTCATTGACAAGGGCGTCGACTTCGCCAACTATTT
CTGCACTTACGCTTTTCTCTATCACCAGAAGGAGATGCTCTCCGATCGAGTTCGTATGGA
CGCTTACTACAACGCCATTTTCGAGAACAAGCACCACTTCCGCGGAAAGAAGGCTGTGTT
GGATGTAGGAACTGGGAGTGGCATTCTTGCAATCTGGTCAGCACAAGCAGGTGCAAGGAA
GGTCTATGCAGTGGAAGCAACTAAGATGTCAGAACATGCTCGTGAACTGGTTAAGGCAAA
TAATCTTCAAGATATTGTTGAAGTGATTGAAGGCTCTGTGGAGGATGTTACACTGCCAGA
GAAAGTTGATGTCATTATATCAGAATGGATGGGATATTTTCTTCTGCGTGAATCTATGTT
TGATTCAGTGATTTCTGCACGTGATCGCTGGTTGAAGCCAACTGGAGTTATGTATCCTAG
TCATGCTCGCATGTGGATGGCACCTATCAGGTCTGGATTGGTAGATCAAAAAAAGAATGA
TTATGAAGGATCTATGAATGACTGGCTTTGCTTTGTGAACGAGACTAAAAATGATTATGG
TGTTGATATGAGCGTTCTAACAAAGCCTTTCTCTGAAGAGCAGAGGAAATATTATCTACA
GACATCATTGTGGAACAACCTTCATCCACATCAAGTTGTAGGAACTGCTGCCATCATAAA
GGAGATTGATTGTTTAACGGCAACTGTGGATGACATCTGTGAAGTTAGATCAAACTTTTC
ATCATCAATTTTGATAGAGAACACTAGGCTCTGTGGGTTTGGTGGATGGTTTGATGTCCA
TTTTCGAGGAAGGAGTGATAATCCAGCTCAACAGGAGATTGAGTTGACAACTGCTCCCAG
TCTAGATTCTAGCACCCATTGGGGACAGCAGGTTTTCCTCTTGCATCCTCCTTTTCGCAC
CAGTGAAGGGGATGATGTGAATGTTTCTTTCTTAATGAATCGCTCTAAAGAAAACCATCG
ACTGATGGAGGTTGATCTCGGTTGCGAGATAAGGCAGTCTTCGGGAAAACTTCTTCCACT
TTTCAAAAACAAGTTCTATATAGAATGAAGGAAATAGAACAATTTGGATAACATTAAACC
AGTGTCTTCATCCGAGGGACATGTGGTTGCAAGTTCCAATGCTGATTGTATTAACAGATA
TGATCAGTTACACAAATCATATCTTCTTGTTTCCTTTGGAGATTTTGAGCTTTTCTGTCA
CTTTGAATGTTCAAGTTACGCAAAAGGAAAATTTTGTTGCAATAGTATACTGAAATGCGA
AGGAAAAAAAAGGAGGGGGAGCGGGTATGACAATGGGGGAGAGGAGAAAGAAAAGAATTG
TTTGCTTACATATGCATGAAGGTGTTATAACTGTTATTTAACATACAATTTATTATTATT
ATTTCATCCTTGATTCGTAACTTCAATAGA