Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g04810.t01
CDS Infomation

cds chromosome:12X:11:4101704:4104591:1 gene:VIT_11s0016g04810 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGAGGTGTGGTACTGGTTCAAGCTACTCGTGATATGCTTCATGGCGTTAGTGTTC
GTGTTGAAGGTGGTAGTGTTGCTTTGGTGGAGACCCAGAAAGATCGAACACCATTTTTCC
AAGCAAGGGATTAGAGGTCCCCCTTATCGTTTCTTCATAGGCAATGTCAAAGAGCTTGTG
GGTCTCATGTTGAAGGCTTCTTCTCAACCCATGCCTTTCTCTCACAACATACTCCCCAGA
GTTCTCTCCTTCTACCATCACTGGAAGAAAATCTATGGTGCAACATTTCTCGTGTGGTTC
GGCCCGACCGTTCGTCTCACCATCTCCGATCCGGACCTTATTCGGGAGATTTTCGCCTCC
AAGTCGGAATTCTATGAGAAGAACGAGGCACACCCGCTTGTTAAACAGCTTGAAGGTGAT
GGGCTGCTGAGCCTCAAAGGCGAAAAATGGGCTCATCATAGGAAAATCATAACACCTACC
TTGCACATGGAGAATCTCAAACTGATGGTACCGGTGATGGCGAAGAGCGTGACCGAAATG
TTGGAGAAATGGATGGCAATGTCAAAATCAGGTGAGGTAGAGATTGAAGTTTCTGAGTGG
TACCAAACATTGACCGAAGATGTCATCACCCGAATGGCATTCGGCAGCAGCTATGAAGAT
GGTAAGGCCATTTTCCAACTCCAAGCTCAGCAAATGGTCATGGCTGCCGAGGCATTTCAG
AAAGTTTTCATCCCCGGCTATAGATTCCTTCCAACCAAAAGAAACATGAATTCTTGGAAA
TTGGACAAGGAGATAAAGAAATCGCTGGTGAAGCTGATTGATCGGCGAAAGGAGAATAGG
TGGAAGGAAAATCCGGAGAAATGTCCAAAAGATTTATTGGGGCTAATGATAGAAGAAACG
GTTAAAAAGGGAGAAATGAGTTGGTGCCCATCATCCAAGATTACGGTACAGGACATTGTT
GAGGAGTGCAAGAGTTTCTTCTTCGCCGGAAAGCAGACAACCTCCAATCTGCTGACCTGG
ACTACGGTTCTCCTTGCAATGCACCCACAGTGGCAGGTTCGAGCACGTGACGAGGTTTTC
CGTGTGTGCGGAGCACGTGATACACCAACCAAAGATGATGTTGTCAAACTTAAGACGCTA
AGCATGATCCTCAATGAGTCCCTGCGCCTCTATCCGCCCATCATCGCAGCCATCAGACGG
GCCAAAACGGATGTAGAGCTGGGAGGCTACAAGATCCCCCGTGGGATGGAGCTCCTAATC
CCAATCCTAGCCGTTCATCATGATCCCTTGATATGGGGCAATGATGCAAATGAATTCAAC
CCGGCCCGATTCGCGGAAGGAGTGGCCCGAGCCGCCAAGCATCCGGTGGCGTTCATTCCA
TTCGGCCTGGGCGTCCGTACATGCATTGGCCAAAATTTAGCCATCTTGCAGGCCAAACTG
GCCCTTGCCATAATCCTCCAACGCTTCTCCTTCACTCTTGCCCCCTCCTACCAGCATGCA
CCAACGGTTTTGATGCTCTTGTACCCTCAGTACGGGGCCCCCATCACCTTTCGAACTTTA
TCCACACCTGATCAAGGGTCCTAA

Peptide Sequence

PEP ID

VIT_11s0016g04810.t01
PEP Infomation

pep chromosome:12X:11:4101704:4104591:1 gene:VIT_11s0016g04810 transcript:VIT_11s0016g04810.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEEVWYWFKLLVICFMALVFVLKVVVLLWWRPRKIEHHFSKQGIRGPPYRFFIGNVKELV
GLMLKASSQPMPFSHNILPRVLSFYHHWKKIYGATFLVWFGPTVRLTISDPDLIREIFAS
KSEFYEKNEAHPLVKQLEGDGLLSLKGEKWAHHRKIITPTLHMENLKLMVPVMAKSVTEM
LEKWMAMSKSGEVEIEVSEWYQTLTEDVITRMAFGSSYEDGKAIFQLQAQQMVMAAEAFQ
KVFIPGYRFLPTKRNMNSWKLDKEIKKSLVKLIDRRKENRWKENPEKCPKDLLGLMIEET
VKKGEMSWCPSSKITVQDIVEECKSFFFAGKQTTSNLLTWTTVLLAMHPQWQVRARDEVF
RVCGARDTPTKDDVVKLKTLSMILNESLRLYPPIIAAIRRAKTDVELGGYKIPRGMELLI
PILAVHHDPLIWGNDANEFNPARFAEGVARAAKHPVAFIPFGLGVRTCIGQNLAILQAKL
ALAIILQRFSFTLAPSYQHAPTVLMLLYPQYGAPITFRTLSTPDQGS

Transcript Sequence

Transcript ID

VIT_11s0016g04810.t01
Transcript Infomation

cdna chromosome:12X:11:4101704:4104591:1 gene:VIT_11s0016g04810 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGTTGTGTTGTTTTTGTGTCTATGTTTTCAGCCATGGAGGAGGTGTGGTACTGGTTCAAG
CTACTCGTGATATGCTTCATGGCGTTAGTGTTCGTGTTGAAGGTGGTAGTGTTGCTTTGG
TGGAGACCCAGAAAGATCGAACACCATTTTTCCAAGCAAGGGATTAGAGGTCCCCCTTAT
CGTTTCTTCATAGGCAATGTCAAAGAGCTTGTGGGTCTCATGTTGAAGGCTTCTTCTCAA
CCCATGCCTTTCTCTCACAACATACTCCCCAGAGTTCTCTCCTTCTACCATCACTGGAAG
AAAATCTATGGTGCAACATTTCTCGTGTGGTTCGGCCCGACCGTTCGTCTCACCATCTCC
GATCCGGACCTTATTCGGGAGATTTTCGCCTCCAAGTCGGAATTCTATGAGAAGAACGAG
GCACACCCGCTTGTTAAACAGCTTGAAGGTGATGGGCTGCTGAGCCTCAAAGGCGAAAAA
TGGGCTCATCATAGGAAAATCATAACACCTACCTTGCACATGGAGAATCTCAAACTGATG
GTACCGGTGATGGCGAAGAGCGTGACCGAAATGTTGGAGAAATGGATGGCAATGTCAAAA
TCAGGTGAGGTAGAGATTGAAGTTTCTGAGTGGTACCAAACATTGACCGAAGATGTCATC
ACCCGAATGGCATTCGGCAGCAGCTATGAAGATGGTAAGGCCATTTTCCAACTCCAAGCT
CAGCAAATGGTCATGGCTGCCGAGGCATTTCAGAAAGTTTTCATCCCCGGCTATAGATTC
CTTCCAACCAAAAGAAACATGAATTCTTGGAAATTGGACAAGGAGATAAAGAAATCGCTG
GTGAAGCTGATTGATCGGCGAAAGGAGAATAGGTGGAAGGAAAATCCGGAGAAATGTCCA
AAAGATTTATTGGGGCTAATGATAGAAGAAACGGTTAAAAAGGGAGAAATGAGTTGGTGC
CCATCATCCAAGATTACGGTACAGGACATTGTTGAGGAGTGCAAGAGTTTCTTCTTCGCC
GGAAAGCAGACAACCTCCAATCTGCTGACCTGGACTACGGTTCTCCTTGCAATGCACCCA
CAGTGGCAGGTTCGAGCACGTGACGAGGTTTTCCGTGTGTGCGGAGCACGTGATACACCA
ACCAAAGATGATGTTGTCAAACTTAAGACGCTAAGCATGATCCTCAATGAGTCCCTGCGC
CTCTATCCGCCCATCATCGCAGCCATCAGACGGGCCAAAACGGATGTAGAGCTGGGAGGC
TACAAGATCCCCCGTGGGATGGAGCTCCTAATCCCAATCCTAGCCGTTCATCATGATCCC
TTGATATGGGGCAATGATGCAAATGAATTCAACCCGGCCCGATTCGCGGAAGGAGTGGCC
CGAGCCGCCAAGCATCCGGTGGCGTTCATTCCATTCGGCCTGGGCGTCCGTACATGCATT
GGCCAAAATTTAGCCATCTTGCAGGCCAAACTGGCCCTTGCCATAATCCTCCAACGCTTC
TCCTTCACTCTTGCCCCCTCCTACCAGCATGCACCAACGGTTTTGATGCTCTTGTACCCT
CAGTACGGGGCCCCCATCACCTTTCGAACTTTATCCACACCTGATCAAGGGTCCTAA