Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g04750.t01
CDS Infomation

cds chromosome:12X:11:4046107:4052225:-1 gene:VIT_11s0016g04750 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTGGATGTGTGTATGAGCAGAGGTTTCGGGGTTTCTGTGTGTGGCCAACCTGAGATT
GAGCAGCTATCAAGAGATGGTAGCCACTACAGTCTCTCCACTGGGATTCTTCCATCTCTT
GGAGCCAGAAGTAACCGCAGAGTCAAGCTCAGGAACTTCATCTTATCACCTTATGATCGT
CGTTACAGGACATGGGAGACTTTTCTGGTTCTTCTGGTCTTCTATACTGCTTGGGTGTCC
CCGTTCGAATTTGGATTCCTTAAGAAACCAGAGGCACCGCTCTCCATTACTGATAATGTT
GTCAATGGTTTCTTTGCTGTGGATATCGTTCTTACCTTCTTTGTAGCTTATCTGGATAAA
ACTACCTACCTCCTTGTCGACAATCCAAAGCAAATTGCTTGGAAGTATACAAGTACCTGG
CTGGCCTTTGATGTCATATCCACAATCCCTTCTGAACTGGCTAGAAAAATTACCCCCTCT
CCTTTCCAGTCATATGGCTTTTTCAACATGCTTCGCCTCTGGCGCCTTCGGAGAGTTAGT
TCCCTGTTTGCTAGATTGGAGAAAGATAGGAACTTTAATTACTTTTGGGTTCGATGCGCA
AAACTTATTTGTGTCACCGTTTTTGCAGTTCATTGTGCTGCATGCTTTTATTATCTTCTT
GCCGCACGTTATCATGACCCACAAAAGACATGGATTGGAGCCTCCATGAATAACTTCCTT
GAACAAAGCCTGTGGATCCGTTATGTGACAGCGATTTACTGGTCTATCACTACTCTCACA
ACTGTTGGCTATGGTGATTTGCATCCTGAAAATACAAGGGAGATGATCTTTGACATCTTC
TACATGCTCTTCAACCTTGGGTTGACAGCATATCTGATTGGGAATATGACCAACTTGGTC
GTTCATGGGACAAGTCGAACTAGAAGATTTAGGGATACCATTCAAGCCGCCTCAAGTTTT
GCACAGAGGAACCAACTGCCCGTTCGGCTGCAAGATCAAATGCTTGCACACTTATGTTTG
AAGTTCAGAACAGACTCAGAGGGACTTCAGCAGCAAGAGACTCTTGATTCCCTTCCAAAG
GCCATTCGGTCAAGCATTTCACATTTTCTTTTCTACTCTCTCTTGGACAAGGTTTACTTA
TTTCGTGGGGTATCCAATGACTTGCTTTTTCAGCTGGTGTCGGAGATGAAAGCTGAGTAT
TTTCCTCCCAAGGAAGATCTGATCTTGCAAAATGAAGCACCCACAGATTTCTATATAGTC
GTTTCAGGCGCTTTGGATCTTCTGGTTCTCAAAAATGGCACTGAACAGGCAATTGGAGAG
GCAAAAACTGGAGACCTTTGTGGTGAGATTGGGGTTCTTTGTTATAGGCCACAGCTCTTT
ACGGTGCGGACGAAGCGATTGTGCCAGCTGCTTCGGCTGAACCGTACTACATTCTTGAAT
ATCGTTCAGGCCAATGTTGGAGACGGGACAATAATAATGAATAATCTCCTTCAGCATTTG
AAAGACCTAAAGGACCCAATCATGGAGGGAGTTTTGGTAGAGACAGAGAACATGCTAGCT
CGTGGTAGAATGGACCTACCTCTCAGTTTGTGCTTTGCAACACTAAGAGGAGATGACCTT
TTGTTGCATCAGTTGTTGAAACGTGGTCTGGATCCAAATGAATCCGACAGCAATGGGAGG
ACAGCTCTGCACATAGCAGCTTCTAAAGGAAGTGAAAGCTGTGTACTTCTTCTACTAGAT
TATGGGGCAGGGCCAAACAATAGAGACTCGGAGGGAGTGGTACCACTATGGGAAGCAATG
GTGGGTGGTCATGAATCTGTTATTCAACTGCTTGTGGACAATGGTGCAAACATAAATTCT
GGTGACGTCGGTCACTTTGCTTGCACCGCTGCTGAGCTGAAGAACTTGAACTTGCTCAAG
CAAATTGTTCACTATGGAGGGGATGTCACACAGCCTAACAACACTGGAAATACAGCTCTT
CATGCTGCAGTTTGTGAGGAAAACATTGAAATGGTCAAATTCCTTTTGGACCAAGGAGCT
GATATTGACAGAACAAACGACCATGGCTGGACCCCAAGAGATCTAGCTGATCAGCAAGGA
CACGAAGATATAAAAGCTCTGTTTGAATCTTGCAAAGAGCACAAAAGTCAATCTACCATT
GGTATTTCAGAAGAGCGGCATGGAATTCGCTTCCTTGGAAAATTTAAAAGTGATCCTTCC
ATCTTTCCACTCCCACAAGGAGGCTCCTCCCCAGCAGCAGATGGATCATGGGGGCATAAC
CGACCGAGACGTAGAACTAACAAGTTCCACAACTCACTATTTGGGATCATGTCAGCTGCC
CACACTGGGGAGAGAGACATGTTACTGTCCGTAAATGTTACTAAATCTGCCAGAAGTGGG
GAAGGTTACCCTGCTAGAGTGAGAATAAGCTGTCCAGAAAAGGGAGATAGAGCAGGGAAG
CTCATGCTACTTCCAGAGAGCTTTCAAGAGCTACTTGAGATTGGAGCCAAAAAATTCGGT
ATCTCCCATGCAAAAGTTCAGACCGAAGATGGAGCTGAAATTGATGCTATAGAGTTGATT
AGAGATGGAGACCATCTTGTTTTTGTTAGTGATGGTTGA

Peptide Sequence

PEP ID

VIT_11s0016g04750.t01
PEP Infomation

pep chromosome:12X:11:4046107:4052225:-1 gene:VIT_11s0016g04750 transcript:VIT_11s0016g04750.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVDVCMSRGFGVSVCGQPEIEQLSRDGSHYSLSTGILPSLGARSNRRVKLRNFILSPYDR
RYRTWETFLVLLVFYTAWVSPFEFGFLKKPEAPLSITDNVVNGFFAVDIVLTFFVAYLDK
TTYLLVDNPKQIAWKYTSTWLAFDVISTIPSELARKITPSPFQSYGFFNMLRLWRLRRVS
SLFARLEKDRNFNYFWVRCAKLICVTVFAVHCAACFYYLLAARYHDPQKTWIGASMNNFL
EQSLWIRYVTAIYWSITTLTTVGYGDLHPENTREMIFDIFYMLFNLGLTAYLIGNMTNLV
VHGTSRTRRFRDTIQAASSFAQRNQLPVRLQDQMLAHLCLKFRTDSEGLQQQETLDSLPK
AIRSSISHFLFYSLLDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDLILQNEAPTDFYIV
VSGALDLLVLKNGTEQAIGEAKTGDLCGEIGVLCYRPQLFTVRTKRLCQLLRLNRTTFLN
IVQANVGDGTIIMNNLLQHLKDLKDPIMEGVLVETENMLARGRMDLPLSLCFATLRGDDL
LLHQLLKRGLDPNESDSNGRTALHIAASKGSESCVLLLLDYGAGPNNRDSEGVVPLWEAM
VGGHESVIQLLVDNGANINSGDVGHFACTAAELKNLNLLKQIVHYGGDVTQPNNTGNTAL
HAAVCEENIEMVKFLLDQGADIDRTNDHGWTPRDLADQQGHEDIKALFESCKEHKSQSTI
GISEERHGIRFLGKFKSDPSIFPLPQGGSSPAADGSWGHNRPRRRTNKFHNSLFGIMSAA
HTGERDMLLSVNVTKSARSGEGYPARVRISCPEKGDRAGKLMLLPESFQELLEIGAKKFG
ISHAKVQTEDGAEIDAIELIRDGDHLVFVSDG

Transcript Sequence

Transcript ID

VIT_11s0016g04750.t01
Transcript Infomation

cdna chromosome:12X:11:4046107:4052225:-1 gene:VIT_11s0016g04750 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGCAACAATGGTGGATGTGTGTATGAGCAGAGGTTTCGGGGTTTCTGTGTGTGGCCAACC
TGAGATTGAGCAGCTATCAAGAGATGGTAGCCACTACAGTCTCTCCACTGGGATTCTTCC
ATCTCTTGGAGCCAGAAGTAACCGCAGAGTCAAGCTCAGGAACTTCATCTTATCACCTTA
TGATCGTCGTTACAGGACATGGGAGACTTTTCTGGTTCTTCTGGTCTTCTATACTGCTTG
GGTGTCCCCGTTCGAATTTGGATTCCTTAAGAAACCAGAGGCACCGCTCTCCATTACTGA
TAATGTTGTCAATGGTTTCTTTGCTGTGGATATCGTTCTTACCTTCTTTGTAGCTTATCT
GGATAAAACTACCTACCTCCTTGTCGACAATCCAAAGCAAATTGCTTGGAAGTATACAAG
TACCTGGCTGGCCTTTGATGTCATATCCACAATCCCTTCTGAACTGGCTAGAAAAATTAC
CCCCTCTCCTTTCCAGTCATATGGCTTTTTCAACATGCTTCGCCTCTGGCGCCTTCGGAG
AGTTAGTTCCCTGTTTGCTAGATTGGAGAAAGATAGGAACTTTAATTACTTTTGGGTTCG
ATGCGCAAAACTTATTTGTGTCACCGTTTTTGCAGTTCATTGTGCTGCATGCTTTTATTA
TCTTCTTGCCGCACGTTATCATGACCCACAAAAGACATGGATTGGAGCCTCCATGAATAA
CTTCCTTGAACAAAGCCTGTGGATCCGTTATGTGACAGCGATTTACTGGTCTATCACTAC
TCTCACAACTGTTGGCTATGGTGATTTGCATCCTGAAAATACAAGGGAGATGATCTTTGA
CATCTTCTACATGCTCTTCAACCTTGGGTTGACAGCATATCTGATTGGGAATATGACCAA
CTTGGTCGTTCATGGGACAAGTCGAACTAGAAGATTTAGGGATACCATTCAAGCCGCCTC
AAGTTTTGCACAGAGGAACCAACTGCCCGTTCGGCTGCAAGATCAAATGCTTGCACACTT
ATGTTTGAAGTTCAGAACAGACTCAGAGGGACTTCAGCAGCAAGAGACTCTTGATTCCCT
TCCAAAGGCCATTCGGTCAAGCATTTCACATTTTCTTTTCTACTCTCTCTTGGACAAGGT
TTACTTATTTCGTGGGGTATCCAATGACTTGCTTTTTCAGCTGGTGTCGGAGATGAAAGC
TGAGTATTTTCCTCCCAAGGAAGATCTGATCTTGCAAAATGAAGCACCCACAGATTTCTA
TATAGTCGTTTCAGGCGCTTTGGATCTTCTGGTTCTCAAAAATGGCACTGAACAGGCAAT
TGGAGAGGCAAAAACTGGAGACCTTTGTGGTGAGATTGGGGTTCTTTGTTATAGGCCACA
GCTCTTTACGGTGCGGACGAAGCGATTGTGCCAGCTGCTTCGGCTGAACCGTACTACATT
CTTGAATATCGTTCAGGCCAATGTTGGAGACGGGACAATAATAATGAATAATCTCCTTCA
GCATTTGAAAGACCTAAAGGACCCAATCATGGAGGGAGTTTTGGTAGAGACAGAGAACAT
GCTAGCTCGTGGTAGAATGGACCTACCTCTCAGTTTGTGCTTTGCAACACTAAGAGGAGA
TGACCTTTTGTTGCATCAGTTGTTGAAACGTGGTCTGGATCCAAATGAATCCGACAGCAA
TGGGAGGACAGCTCTGCACATAGCAGCTTCTAAAGGAAGTGAAAGCTGTGTACTTCTTCT
ACTAGATTATGGGGCAGGGCCAAACAATAGAGACTCGGAGGGAGTGGTACCACTATGGGA
AGCAATGGTGGGTGGTCATGAATCTGTTATTCAACTGCTTGTGGACAATGGTGCAAACAT
AAATTCTGGTGACGTCGGTCACTTTGCTTGCACCGCTGCTGAGCTGAAGAACTTGAACTT
GCTCAAGCAAATTGTTCACTATGGAGGGGATGTCACACAGCCTAACAACACTGGAAATAC
AGCTCTTCATGCTGCAGTTTGTGAGGAAAACATTGAAATGGTCAAATTCCTTTTGGACCA
AGGAGCTGATATTGACAGAACAAACGACCATGGCTGGACCCCAAGAGATCTAGCTGATCA
GCAAGGACACGAAGATATAAAAGCTCTGTTTGAATCTTGCAAAGAGCACAAAAGTCAATC
TACCATTGGTATTTCAGAAGAGCGGCATGGAATTCGCTTCCTTGGAAAATTTAAAAGTGA
TCCTTCCATCTTTCCACTCCCACAAGGAGGCTCCTCCCCAGCAGCAGATGGATCATGGGG
GCATAACCGACCGAGACGTAGAACTAACAAGTTCCACAACTCACTATTTGGGATCATGTC
AGCTGCCCACACTGGGGAGAGAGACATGTTACTGTCCGTAAATGTTACTAAATCTGCCAG
AAGTGGGGAAGGTTACCCTGCTAGAGTGAGAATAAGCTGTCCAGAAAAGGGAGATAGAGC
AGGGAAGCTCATGCTACTTCCAGAGAGCTTTCAAGAGCTACTTGAGATTGGAGCCAAAAA
ATTCGGTATCTCCCATGCAAAAGTTCAGACCGAAGATGGAGCTGAAATTGATGCTATAGA
GTTGATTAGAGATGGAGACCATCTTGTTTTTGTTAGTGATGGTTGAAGTAAAGACTTTTT
TTTTTCCTCCCTACTTTAACACAATGTCTTTTGTCATTTAAAGTAAATTCAAAATGTAAA
GATGGTGAAAGA