Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g04700.t01
CDS Infomation

cds chromosome:12X:11:3988735:3992060:1 gene:VIT_11s0016g04700 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTTTCACTTCACTACTCAGGATACCCAGCTGGTTGGCACAGAACCTTCTTTCAAAA
AAGGAAAGGGGACCCTCAAAAAATTCCCTGAAAGAAGCCAAAAGGAGGAGGAATACAATC
AGGACCGTTTATAATGGCAAAACAGAAAGCCGCCACGCAGAAAAGGACACGCTGTACAGT
CCACACAGTCAACCTCCAATGAAGTTTCAAAGCCAATATATTTATAGTGCTCTCTGCGTC
TCGTTCCTTCTCTTTGGCTCCTCCGGCGCGATTGAACTTTGGAACGATCGGTGGAGGGTT
GTGGCGTTAGAGGGGAAAATGTCAGAAGCGAAGGTAGACACGCCATTGATCTCACCATCA
TCATCACGAAATCTCCCTGATTTCAAAAAGTCTGTTAAATTGAAGTACGTAAAGCTTGGT
TACCATTACTTGATCACCCATGGAATGTACCTCTTTCTTTCCCCTCTTGTCGTTGTAATT
GCCGCTCAGCTCTCGACATTTTCTCTCCAAGATCTACATGATCTTTGGGACCATCTTCGA
TTCAACCTCATCTCCGTGATTCTTTGTTCAACTCTTCTTGTTTTCCTCTCGACCCTTTAC
TTTCTCACGCGTCCTCGCCCAGTGTATCTTGTGGATTTTGCCTGCTACAAGCCTGAAGAA
TCTCGGAAATGCACGAGGAAGATTTTTATGGATCAGTCTCAGATGACTGGTTCATTTACA
GAATCGAGCCTTGAGTTCCAGCGGAAGATCCTTGAGAAATCTGGCCTTGGGGAGTCAACT
TACCTTCCTGAGGCTGTTCTCAATATCCCTCCAAACCCATCAATGCAAGAAGCTAGAAAA
GAAGCCGCGACTGTAATGTTTGGTGCCCTCGATCAGCTTTTTGCAAAGACATCTTTGAAG
CCTAAAGACATTGGAATTCTGGTCGTGAATTGTAGCTTGTTCAATCCAACTCCATCCCTT
TCTGCTATGGTCATCAACCATTACAAGCTTAGAGGTAATATAATTAGCTATAATTTGGGT
GGGATGGGTTGCAGTGCTGGTTTAATCTCAATCGATCTCGCTAAAGACCTTCTTCAGGTC
CATCCCAACTCTTATGCATTGGTTATCAGCATGGAGAACATCACTTTGAACTGGTATTTT
GGGAACCAGAGGTCCATGCTTGTTTCCAATTGTTTATTCAGGATGGGAGGAGCTGCTGTG
CTGCTTTCAAATAAAAGCTCTGACAGAAGAAGGTCTAAATACCGATTGGTGCATACTGTC
CGAACCCACAAGGGTGCTGATGATAAGTGCTTTGCCTGTGTTACCCAAGAAGAAGATGCC
GAAGGAAAGGTTGGTGTTTCTTTGTCTAAGGATCTTATGGGAGTTGCAGGCGATGCTTTA
AAGACCAACATCACTACCTTAGGCCCTCTTGTTCTGCCAATGTCTGAACAGTTGCTCTTC
TTTGCTACATTAATTGGGAGGAAACTTTTCAAGATGAAACTCAAGCCTTATATTCCAGAT
TTCAAACTAGCTTTTGAGCACTTCTGCATTCATGCTGGGGGAAGAGCTGTTCTGGATGAA
TTAGAGAAGAACTTGCACCTCTCTGACTGGCATATGGAGCCATCAAGGATGACACTTTAT
CGATTTGGCAACACCTCGAGCAGTTCTCTTTGGTACGAATTAGCCTATACTGAAGCCAAG
GGCAGAATTAAGAAGGGGGATAGAACATGGCAGATAGCATTTGGATCTGGGTTCAAGTGC
AATAGTGCAGTGTGGAAGGCTTTAAGGACCATAAACCCAGCACAGGAGAAGAACCCATGG
ATGGATGAAATTGACATGTTTCCAGTGAATGTTCCAAAGGTATCAGCCCTCTAA

Peptide Sequence

PEP ID

VIT_11s0016g04700.t01
PEP Infomation

pep chromosome:12X:11:3988735:3992060:1 gene:VIT_11s0016g04700 transcript:VIT_11s0016g04700.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSFTSLLRIPSWLAQNLLSKKERGPSKNSLKEAKRRRNTIRTVYNGKTESRHAEKDTLYS
PHSQPPMKFQSQYIYSALCVSFLLFGSSGAIELWNDRWRVVALEGKMSEAKVDTPLISPS
SSRNLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLVVVIAAQLSTFSLQDLHDLWDHLR
FNLISVILCSTLLVFLSTLYFLTRPRPVYLVDFACYKPEESRKCTRKIFMDQSQMTGSFT
ESSLEFQRKILEKSGLGESTYLPEAVLNIPPNPSMQEARKEAATVMFGALDQLFAKTSLK
PKDIGILVVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLAKDLLQV
HPNSYALVISMENITLNWYFGNQRSMLVSNCLFRMGGAAVLLSNKSSDRRRSKYRLVHTV
RTHKGADDKCFACVTQEEDAEGKVGVSLSKDLMGVAGDALKTNITTLGPLVLPMSEQLLF
FATLIGRKLFKMKLKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLHLSDWHMEPSRMTLY
RFGNTSSSSLWYELAYTEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRTINPAQEKNPW
MDEIDMFPVNVPKVSAL

Transcript Sequence

Transcript ID

VIT_11s0016g04700.t01
Transcript Infomation

cdna chromosome:12X:11:3988735:3992060:1 gene:VIT_11s0016g04700 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTTTCACTTCACTACTCAGGATACCCAGCTGGTTGGCACAGAACCTTCTTTCAAAA
AAGGAAAGGGGACCCTCAAAAAATTCCCTGAAAGAAGCCAAAAGGAGGAGGAATACAATC
AGGACCGTTTATAATGGCAAAACAGAAAGCCGCCACGCAGAAAAGGACACGCTGTACAGT
CCACACAGTCAACCTCCAATGAAGTTTCAAAGCCAATATATTTATAGTGCTCTCTGCGTC
TCGTTCCTTCTCTTTGGCTCCTCCGGCGCGATTGAACTTTGGAACGATCGGTGGAGGGTT
GTGGCGTTAGAGGGGAAAATGTCAGAAGCGAAGGTAGACACGCCATTGATCTCACCATCA
TCATCACGAAATCTCCCTGATTTCAAAAAGTCTGTTAAATTGAAGTACGTAAAGCTTGGT
TACCATTACTTGATCACCCATGGAATGTACCTCTTTCTTTCCCCTCTTGTCGTTGTAATT
GCCGCTCAGCTCTCGACATTTTCTCTCCAAGATCTACATGATCTTTGGGACCATCTTCGA
TTCAACCTCATCTCCGTGATTCTTTGTTCAACTCTTCTTGTTTTCCTCTCGACCCTTTAC
TTTCTCACGCGTCCTCGCCCAGTGTATCTTGTGGATTTTGCCTGCTACAAGCCTGAAGAA
TCTCGGAAATGCACGAGGAAGATTTTTATGGATCAGTCTCAGATGACTGGTTCATTTACA
GAATCGAGCCTTGAGTTCCAGCGGAAGATCCTTGAGAAATCTGGCCTTGGGGAGTCAACT
TACCTTCCTGAGGCTGTTCTCAATATCCCTCCAAACCCATCAATGCAAGAAGCTAGAAAA
GAAGCCGCGACTGTAATGTTTGGTGCCCTCGATCAGCTTTTTGCAAAGACATCTTTGAAG
CCTAAAGACATTGGAATTCTGGTCGTGAATTGTAGCTTGTTCAATCCAACTCCATCCCTT
TCTGCTATGGTCATCAACCATTACAAGCTTAGAGGTAATATAATTAGCTATAATTTGGGT
GGGATGGGTTGCAGTGCTGGTTTAATCTCAATCGATCTCGCTAAAGACCTTCTTCAGGTC
CATCCCAACTCTTATGCATTGGTTATCAGCATGGAGAACATCACTTTGAACTGGTATTTT
GGGAACCAGAGGTCCATGCTTGTTTCCAATTGTTTATTCAGGATGGGAGGAGCTGCTGTG
CTGCTTTCAAATAAAAGCTCTGACAGAAGAAGGTCTAAATACCGATTGGTGCATACTGTC
CGAACCCACAAGGGTGCTGATGATAAGTGCTTTGCCTGTGTTACCCAAGAAGAAGATGCC
GAAGGAAAGGTTGGTGTTTCTTTGTCTAAGGATCTTATGGGAGTTGCAGGCGATGCTTTA
AAGACCAACATCACTACCTTAGGCCCTCTTGTTCTGCCAATGTCTGAACAGTTGCTCTTC
TTTGCTACATTAATTGGGAGGAAACTTTTCAAGATGAAACTCAAGCCTTATATTCCAGAT
TTCAAACTAGCTTTTGAGCACTTCTGCATTCATGCTGGGGGAAGAGCTGTTCTGGATGAA
TTAGAGAAGAACTTGCACCTCTCTGACTGGCATATGGAGCCATCAAGGATGACACTTTAT
CGATTTGGCAACACCTCGAGCAGTTCTCTTTGGTACGAATTAGCCTATACTGAAGCCAAG
GGCAGAATTAAGAAGGGGGATAGAACATGGCAGATAGCATTTGGATCTGGGTTCAAGTGC
AATAGTGCAGTGTGGAAGGCTTTAAGGACCATAAACCCAGCACAGGAGAAGAACCCATGG
ATGGATGAAATTGACATGTTTCCAGTGAATGTTCCAAAGGTATCAGCCCTCTAAAGCCAG
AAATGGTATTTTTGTTCCCCATTCTTTTGCAGCTGTAATTCGAGATGTGGGCAAGACATT
TGAATGGTAAAATCTTTGATTCTTTCTATTTTTCGGATTGGACTGTGTTTTGGCCACCAT
GAGGAGGGTGGTTGTTAGCCTTTTGCTTTTCTTTCAATTGTGGTCTTGAAGCAGATGGAA
GATAGCTTCTTGTTGGGGAGATGGATTATTTGCATCGAAGAGTTTTAGTAATTGCTGTGA
GGTTCTGTCTTCGTTACTAGGGATTAATGTGATTCAATTTGGAATTTGAACTATTTGTCT
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