Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g04650.t01
CDS Infomation

cds chromosome:12X:11:3969838:3971761:-1 gene:VIT_11s0016g04650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTTCGACTAGATTTGATTCGTCGAAGCAGTACTATGCCACGAGCAGTCTCGTAGTG
GGTTACGCGCTGTGTTCAAGCTTGCTTGCTGTGATAAACAAGATTGCCATTACTCAATTC
AACTATCCTGGCCTTCTGACTGCATTACAGTATCTGACTTCAGCGTTAGGTGTTTGGGTT
TTGGGAAAATTGGGGTTTTTGCATCATGATCCGTTCACATTGGAGATCGCAAAGAAATTC
TTACCGGCTGCAATTGTTTTCTACCTTGCGATCTTTACGAACACAAATTTGCTTCGCCAT
GCCAATGTTGATACTTTTATTGTATTTCGGTCTTTGACGCCCCTTCTGGTTGCTATAGCA
GATACGACATTTAGGAAACAGCCATGTCCGTCAAAGTTAACTTTCATGTCGCTATTGATC
ATTTTGGGTGGTGCTGTTGGGTATGTAGCCACGGATTCAGGTTTTACTTTAACCGCGTAT
TCATGGGCATTTGCATATTTGGTGACAATTACATCGGAGATGGTCTATATCAAGCATATG
GTCACAAATCTTGGTTTGAACACTTGGGGTTTTGTGTTTTACAACAATTTGCTGTCTTTG
ATGATGGCACCGGTGTTCTGGGTTCTTACGGGAGAGTATGCTGATGTGTTTGCTGCTATG
AGATCGGCTTCTGGGAACTGGATGGATTCCAGTGCACTTTTTGCAGTTTCATTGTCTTGT
GTGTTTGGATTGCTTATAAGCTTCTTCGGGTTTGCAGCTAGGAAGGCAATCTCTGCCACA
GCATTTACAGTGACTGGTGTGGTTAATAAGTTTCTTACAGTTGCTATCAATGTGTTGATT
TGGGATAAGCATGCTAGTCCATTTGGGTTGGTTTGCCTCCTCCTCACAATTGTGGGGGGT
GTTCTTTATCAGCAGTCAGTTACTGGAGCTGGCAGTGCTCCTTCACAGCGTGATCCCGCT
GTGTCTAAACAAACTGACGGTGAGAATGATGGTGATTTTGATGATGAGAATCAAGCAAAA
GGAATATCGGTTTGTATGCTTGGCTACAGCTTCACTAAAATTGAGGAATATGATCACAGG
TGGCCAGAATCTAGGATTAAGACTATGGGACAGTATTTGATAGTGTAA

Peptide Sequence

PEP ID

VIT_11s0016g04650.t01
PEP Infomation

pep chromosome:12X:11:3969838:3971761:-1 gene:VIT_11s0016g04650 transcript:VIT_11s0016g04650.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSSTRFDSSKQYYATSSLVVGYALCSSLLAVINKIAITQFNYPGLLTALQYLTSALGVWV
LGKLGFLHHDPFTLEIAKKFLPAAIVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVAIA
DTTFRKQPCPSKLTFMSLLIILGGAVGYVATDSGFTLTAYSWAFAYLVTITSEMVYIKHM
VTNLGLNTWGFVFYNNLLSLMMAPVFWVLTGEYADVFAAMRSASGNWMDSSALFAVSLSC
VFGLLISFFGFAARKAISATAFTVTGVVNKFLTVAINVLIWDKHASPFGLVCLLLTIVGG
VLYQQSVTGAGSAPSQRDPAVSKQTDGENDGDFDDENQAKGISVCMLGYSFTKIEEYDHR
WPESRIKTMGQYLIV

Transcript Sequence

Transcript ID

VIT_11s0016g04650.t01
Transcript Infomation

cdna chromosome:12X:11:3969838:3971761:-1 gene:VIT_11s0016g04650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAAATCCACAGCGTCCATTCCAAAATGCATATCGTCTCTGACTCTCATAATCCAAGCCCA
TTTCACCTGTGAAGCTGTTTTCATCTCTCACTCTGCCAGAGGTCTCTTCCAATCCCAATC
TCTTTGTACTTTCTTTAAGATCCCAAACTTCTCTGCATCCCATTGATCGGTCTATCCATT
TCTTCTAGGGTTTTGAATCCGTCGCTATAATTTCTATTGTATCAGTAATTTGTTTCCATT
TCTGCTAAATCTAGCCAAATTAAGTGGATCAACAGAATCTTGAGGACCCACGTTTTAGTT
TTTGCAATGACTGGTTTTGATGCTTCGTTTCCTTTCTATTTCGCTGCATTTGTCAATGCT
CTCCATATGGTTCTTTGAATTGGTGAGTGTCCACTCAATTTAGCATTGAATTTGAAAAAA
AAAAAAACAAAACAGAAAAAAAAAAAACCTAGAAAACGATGTCTTCGACTAGATTTGATT
CGTCGAAGCAGTACTATGCCACGAGCAGTCTCGTAGTGGGTTACGCGCTGTGTTCAAGCT
TGCTTGCTGTGATAAACAAGATTGCCATTACTCAATTCAACTATCCTGGCCTTCTGACTG
CATTACAGTATCTGACTTCAGCGTTAGGTGTTTGGGTTTTGGGAAAATTGGGGTTTTTGC
ATCATGATCCGTTCACATTGGAGATCGCAAAGAAATTCTTACCGGCTGCAATTGTTTTCT
ACCTTGCGATCTTTACGAACACAAATTTGCTTCGCCATGCCAATGTTGATACTTTTATTG
TATTTCGGTCTTTGACGCCCCTTCTGGTTGCTATAGCAGATACGACATTTAGGAAACAGC
CATGTCCGTCAAAGTTAACTTTCATGTCGCTATTGATCATTTTGGGTGGTGCTGTTGGGT
ATGTAGCCACGGATTCAGGTTTTACTTTAACCGCGTATTCATGGGCATTTGCATATTTGG
TGACAATTACATCGGAGATGGTCTATATCAAGCATATGGTCACAAATCTTGGTTTGAACA
CTTGGGGTTTTGTGTTTTACAACAATTTGCTGTCTTTGATGATGGCACCGGTGTTCTGGG
TTCTTACGGGAGAGTATGCTGATGTGTTTGCTGCTATGAGATCGGCTTCTGGGAACTGGA
TGGATTCCAGTGCACTTTTTGCAGTTTCATTGTCTTGTGTGTTTGGATTGCTTATAAGCT
TCTTCGGGTTTGCAGCTAGGAAGGCAATCTCTGCCACAGCATTTACAGTGACTGGTGTGG
TTAATAAGTTTCTTACAGTTGCTATCAATGTGTTGATTTGGGATAAGCATGCTAGTCCAT
TTGGGTTGGTTTGCCTCCTCCTCACAATTGTGGGGGGTGTTCTTTATCAGCAGTCAGTTA
CTGGAGCTGGCAGTGCTCCTTCACAGCGTGATCCCGCTGTGTCTAAACAAACTGACGGTG
AGAATGATGGTGATTTTGATGATGAGAATCAAGCAAAAGGAATATCGGTTTGTATGCTTG
GCTACAGCTTCACTAAAATTGAGGAATATGATCACAGGTGGCCAGAATCTAGGATTAAGA
CTATGGGACAGTATTTGATAGTGTAATGTGCTTAATAAATTCTGAATTCCAATACTGATA
ATAAAATATATCTATTCATGTTGTTTTCTTTCCTTGGATGAATCTA