Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g04400.t01
CDS Infomation

cds chromosome:12X:11:3695730:3697125:1 gene:VIT_11s0016g04400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTCCATGGGTTGAAGAACTCCATTTCCCTCACTTGGAAATCCCTGTAACCATTTCT
CATGTTGGTCTTGTCATGCCATCCGGGATCGTTCCGACCGCACCTGGCCACACCCTCTAC
CTCTCTAACCTGGATGATATAATTGGTGCCCGTGTTTTCACTCCAACTGTATATTTTTAT
CCATCTCATGCTCTGAGTTCTGACCGGAAACTGGTCATGGAAATACTCCGCAATGCTCTT
GCCAGTGTTTTAGTCCCTTACTACGCCTTTGCCGGTAGGATCAGGGAGACCAAAAATGGG
AAGCTGGAAGTGTTTTTTGGGCAAGAACAAGGTGCACTCATGGTCGAGGCACGCACAGAA
ATGGCCTTAGCCACCCTAGGAGACCTTACAGTTCCAAACCCAGCATGGCTTCCATTGGTC
TACTTCTGCCCCAATGAAGAGCCATACAGACTCATTAACATGCCATTACTCATAGCTCAG
GTTACCTTTTTCAGCTGCGGTGGCTTCAGCCTCGGCCTGCGGCTCTGCCACTGCCTCTGC
GATGGCCTCGGTGCCATGCAATTCGTTCGTGCGTGGGCTGCCACAGCAAAAGCGGGCACC
TTAATAACAAATCCTAGGCCATGTTGGGATCGAGAATTCTTCAAGCCACGGAACCCACCC
ATCATAAAATATCCACACATCGAGTTCATGAGGATTGATGATGGCTCCAGCCTAACAATG
AGTCTATGGCAAAAGAAGCCAATTCAAAAGTGTTATCGAATTAGCCCAGAATTTCAAGCT
CAACTCAAAGCTTTAGGACAACCAGCTGATGGCAAGTTCACATGCACCACATTTGATGCC
ATGGCAGCTCATGTTTGGAGGTCCTGGGTGAAAGCCCTTGATGTGCAGCCATTAGACTAC
AATCTTCGCCTTACCTTTTCGGTCAATGCTCGGCAGAAGCTTCAAAACCCGCCATTAAAA
GAGGGGTTTTATGGCAATGTTGTGTGTGTGGCATGTGCCACCAGCACAGTATCCAATCTT
GTTAATGGCCGCCTCTCTGATACCGCCAGGTTGGTTCGAGAAGCAAGGCTCAGCATCTCA
GAGGAGTACCTGAAATCTACACTGGACTATGTTGAGGTGAACAGGCCAAGGAGGCTTGAA
TTTGGTGGGAAATTGACCATAACACAATGGACTAGATTCTCAATATATGAGTCTGCAGAT
TTTGGGTGGGGAAGGCCAGTTTATGCTGGAACCATAGACCTCACTCTCACACCACAGGTT
TGTGTTTTCCTTCCTGAAGGAGGGTCTGATTCAAGTGGTACAATGGTGGTGTGCATTTGC
TTGCCTGAGTCTGCTACCAACAAGTTTACAAAGCATTTAAGTATGATATTGGATTCAAGC
CATGAAAATTGTTGA

Peptide Sequence

PEP ID

VIT_11s0016g04400.t01
PEP Infomation

pep chromosome:12X:11:3695730:3697125:1 gene:VIT_11s0016g04400 transcript:VIT_11s0016g04400.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAPWVEELHFPHLEIPVTISHVGLVMPSGIVPTAPGHTLYLSNLDDIIGARVFTPTVYFY
PSHALSSDRKLVMEILRNALASVLVPYYAFAGRIRETKNGKLEVFFGQEQGALMVEARTE
MALATLGDLTVPNPAWLPLVYFCPNEEPYRLINMPLLIAQVTFFSCGGFSLGLRLCHCLC
DGLGAMQFVRAWAATAKAGTLITNPRPCWDREFFKPRNPPIIKYPHIEFMRIDDGSSLTM
SLWQKKPIQKCYRISPEFQAQLKALGQPADGKFTCTTFDAMAAHVWRSWVKALDVQPLDY
NLRLTFSVNARQKLQNPPLKEGFYGNVVCVACATSTVSNLVNGRLSDTARLVREARLSIS
EEYLKSTLDYVEVNRPRRLEFGGKLTITQWTRFSIYESADFGWGRPVYAGTIDLTLTPQV
CVFLPEGGSDSSGTMVVCICLPESATNKFTKHLSMILDSSHENC

Transcript Sequence

Transcript ID

VIT_11s0016g04400.t01
Transcript Infomation

cdna chromosome:12X:11:3695730:3697125:1 gene:VIT_11s0016g04400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AATGGCTCCATGGGTTGAAGAACTCCATTTCCCTCACTTGGAAATCCCTGTAACCATTTC
TCATGTTGGTCTTGTCATGCCATCCGGGATCGTTCCGACCGCACCTGGCCACACCCTCTA
CCTCTCTAACCTGGATGATATAATTGGTGCCCGTGTTTTCACTCCAACTGTATATTTTTA
TCCATCTCATGCTCTGAGTTCTGACCGGAAACTGGTCATGGAAATACTCCGCAATGCTCT
TGCCAGTGTTTTAGTCCCTTACTACGCCTTTGCCGGTAGGATCAGGGAGACCAAAAATGG
GAAGCTGGAAGTGTTTTTTGGGCAAGAACAAGGTGCACTCATGGTCGAGGCACGCACAGA
AATGGCCTTAGCCACCCTAGGAGACCTTACAGTTCCAAACCCAGCATGGCTTCCATTGGT
CTACTTCTGCCCCAATGAAGAGCCATACAGACTCATTAACATGCCATTACTCATAGCTCA
GGTTACCTTTTTCAGCTGCGGTGGCTTCAGCCTCGGCCTGCGGCTCTGCCACTGCCTCTG
CGATGGCCTCGGTGCCATGCAATTCGTTCGTGCGTGGGCTGCCACAGCAAAAGCGGGCAC
CTTAATAACAAATCCTAGGCCATGTTGGGATCGAGAATTCTTCAAGCCACGGAACCCACC
CATCATAAAATATCCACACATCGAGTTCATGAGGATTGATGATGGCTCCAGCCTAACAAT
GAGTCTATGGCAAAAGAAGCCAATTCAAAAGTGTTATCGAATTAGCCCAGAATTTCAAGC
TCAACTCAAAGCTTTAGGACAACCAGCTGATGGCAAGTTCACATGCACCACATTTGATGC
CATGGCAGCTCATGTTTGGAGGTCCTGGGTGAAAGCCCTTGATGTGCAGCCATTAGACTA
CAATCTTCGCCTTACCTTTTCGGTCAATGCTCGGCAGAAGCTTCAAAACCCGCCATTAAA
AGAGGGGTTTTATGGCAATGTTGTGTGTGTGGCATGTGCCACCAGCACAGTATCCAATCT
TGTTAATGGCCGCCTCTCTGATACCGCCAGGTTGGTTCGAGAAGCAAGGCTCAGCATCTC
AGAGGAGTACCTGAAATCTACACTGGACTATGTTGAGGTGAACAGGCCAAGGAGGCTTGA
ATTTGGTGGGAAATTGACCATAACACAATGGACTAGATTCTCAATATATGAGTCTGCAGA
TTTTGGGTGGGGAAGGCCAGTTTATGCTGGAACCATAGACCTCACTCTCACACCACAGGT
TTGTGTTTTCCTTCCTGAAGGAGGGTCTGATTCAAGTGGTACAATGGTGGTGTGCATTTG
CTTGCCTGAGTCTGCTACCAACAAGTTTACAAAGCATTTAAGTATGATATTGGATTCAAG
CCATGAAAATTGTTGA