Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g04380.t01
CDS Infomation

cds chromosome:12X:11:3684634:3688936:1 gene:VIT_11s0016g04380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCTCTCACTCCAGGTATCCTTCTAAAGCTCCTCCAATCCATGAACTCTAACACC
AAAGTCGCCGGCGAGCACCGTTCCGCCCTCCTCCAAGTCATCGGCATCGTTCCTGCCCTC
GCCGGCTCCGATCTCTGGCCCAACCACGGCTTTTACGTCCAGCTCTCCGACTCCCTCAAC
TCCACCTACGTCTCCCTCTCTGACCGCGACACCGACCTCATCCTCACCAATCGTCTCCAA
CTCGGCCAATTCGTCTATGTAGATCGCTTCGACTTCGACTCTCCCGTTCCCCGTGTTTGC
GGCATCCGCCCAATTGCCGGCCGCCACCCATTTGTTGGAAGTCCTGAACCACTCATTGCT
CGCATTTCCCCTTCGAAAAAGGATTTTGTCATTCAGCCCGTTTCAGATTGGGATCAGTCG
GTTGATCCAATTGCGGCCTATTTGTCGAACAAGAAAATTGACGATGTGAAAAATGATGGT
AAGGAATCGAAAATTGAGACCAAGGGGGAAAAGGGTAGAACAAGGCAGGTTCTTGGTACT
AGGGACAATAATGGGGATTTGGACGAAACTAAGGTTTCGGATAGGCCTCAGCGGTTCTCA
TCTCCGGCAGGTGCGAAAAGATCAGTCTCTGCTGGGAAGAAGAATGTGGCGGTTGCGGAG
AGAGATCCGTCTCCAGCAGGGAAAGGGAAGAGGTCAGCGTCACCAGTACCATCTAAGTGT
ATGGTTCCTAGTTTGGTTGTGGCACGAGAAGAGAATAGGAAGACATCGAGGGAACCTGCA
ATTATAGTGCCTTCGAGGTATAGGCAGCCATCTCCAAATGGGCGGAAACAGGCCTCACCC
AATGCAAGGAGAGCTTCAATTTCTCCAGGGAGAAGGTTGTCAGGCGGTTTGAAGTTTTCG
CCTGCTGTTGGGGGTGCCCCAGATTCTACTAGCAAGAAGAAGATGGCAACTATAGTTGCT
GGGATTTCAAAGGTTTCTGAAGCTCTGGTTGGGTCTGCAAAGGCAGGTAGGAAGAGTTGG
GACGAACCACCAGCGGCGGTGGGCTCTGGGGAGCTGAAAGAGAAAAGCCTTGCAAAAATT
AAACCAGATGTGCAAGCTATTTTGCGAACTCAGGCTGCTATTTCTAGGCGTCTAAGTGAT
GTGCATGGTCGACAAGCAAACCAGGATGATTCTTCTACCAATGAGAAAACAAAACCTAAC
TCAGCAGAAGGATGTCTGGTACCAGAGAAGCCGACCTGTGAGGCTCCAGCAATTACAGTT
CATGAGAAGAAATGGACTGATGGCAGTGTTCCATTGGATACAGTCTCTTCCAGCCTTGCA
AAACTAGGAAAGGAGGCTATGCAAAGGAGAGTTCTTGCTTCTAAAGCCGCAGCTGAAGCT
TTGGAAGAGGCCACTGCTACGGAGTCTATTATAAGGAGTTTAAGCATGTTTTCGGAGCTT
TGTTCAAAATGCAAGGTTGGAAATCCTTTACCCACTATAGATCGATTTTTGTCAATCTAT
GATGAAGTCATGAGATCAACCGCATTCGCTGAATCAGTTAGCACTTGTCACCGCTCTGAC
ATACCTCATGACAGTTCAAATTCTACTTCTCTTTGGGTTGAAGCTGCTTTAGCCACTGAT
CTTGGCATAGTCTCACTCCTAACGGGACTGAATATCGACTCTCAGCCAACATTGCAGAAG
AGTACATCAAAACGACAGGCTCTCACTGCACCTGCCAAAAACCATCTGAAGGTTTCCTCA
TTGCCAGCTTCAGATCCTACTATCGGTTCATGGACGAGGGGTAATGGGATGAAAGAGACC
ATAGAACTTGCAATGAATTTGCAGTCTGAGATGCAAATGTGGTTTGTGAAGTTTGTTGAG
GAGTCCCTAGATGCAGGTTTCCGGGTGTTTAGGGAGTCCAAGGCTGATGTCTGCAGCATG
CTGCCTCCAGAATGTGGCCCAATTGCAGCAATCTTATCACAGTTGAAGAGAGTAAACGAT
TGGTTAGATCGCGTGGCTTCAAAACAAGATGAGTTGCTGACAGAAAAGATCGAACGATTA
AAGAGAAAGATCTATGGATTTGTTATTCATCATGTGGGAACAAGTCTGGATAACTCCTCC
TCCATTCCTTCCTCTTGCATCTCCATGTCCTAG

Peptide Sequence

PEP ID

VIT_11s0016g04380.t01
PEP Infomation

pep chromosome:12X:11:3684634:3688936:1 gene:VIT_11s0016g04380 transcript:VIT_11s0016g04380.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASLTPGILLKLLQSMNSNTKVAGEHRSALLQVIGIVPALAGSDLWPNHGFYVQLSDSLN
STYVSLSDRDTDLILTNRLQLGQFVYVDRFDFDSPVPRVCGIRPIAGRHPFVGSPEPLIA
RISPSKKDFVIQPVSDWDQSVDPIAAYLSNKKIDDVKNDGKESKIETKGEKGRTRQVLGT
RDNNGDLDETKVSDRPQRFSSPAGAKRSVSAGKKNVAVAERDPSPAGKGKRSASPVPSKC
MVPSLVVAREENRKTSREPAIIVPSRYRQPSPNGRKQASPNARRASISPGRRLSGGLKFS
PAVGGAPDSTSKKKMATIVAGISKVSEALVGSAKAGRKSWDEPPAAVGSGELKEKSLAKI
KPDVQAILRTQAAISRRLSDVHGRQANQDDSSTNEKTKPNSAEGCLVPEKPTCEAPAITV
HEKKWTDGSVPLDTVSSSLAKLGKEAMQRRVLASKAAAEALEEATATESIIRSLSMFSEL
CSKCKVGNPLPTIDRFLSIYDEVMRSTAFAESVSTCHRSDIPHDSSNSTSLWVEAALATD
LGIVSLLTGLNIDSQPTLQKSTSKRQALTAPAKNHLKVSSLPASDPTIGSWTRGNGMKET
IELAMNLQSEMQMWFVKFVEESLDAGFRVFRESKADVCSMLPPECGPIAAILSQLKRVND
WLDRVASKQDELLTEKIERLKRKIYGFVIHHVGTSLDNSSSIPSSCISMS

Transcript Sequence

Transcript ID

VIT_11s0016g04380.t01
Transcript Infomation

cdna chromosome:12X:11:3684634:3688936:1 gene:VIT_11s0016g04380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACAATGGCTTCTCTCACTCCAGGTATCCTTCTAAAGCTCCTCCAATCCATGAACTCTAAC
ACCAAAGTCGCCGGCGAGCACCGTTCCGCCCTCCTCCAAGTCATCGGCATCGTTCCTGCC
CTCGCCGGCTCCGATCTCTGGCCCAACCACGGCTTTTACGTCCAGCTCTCCGACTCCCTC
AACTCCACCTACGTCTCCCTCTCTGACCGCGACACCGACCTCATCCTCACCAATCGTCTC
CAACTCGGCCAATTCGTCTATGTAGATCGCTTCGACTTCGACTCTCCCGTTCCCCGTGTT
TGCGGCATCCGCCCAATTGCCGGCCGCCACCCATTTGTTGGAAGTCCTGAACCACTCATT
GCTCGCATTTCCCCTTCGAAAAAGGATTTTGTCATTCAGCCCGTTTCAGATTGGGATCAG
TCGGTTGATCCAATTGCGGCCTATTTGTCGAACAAGAAAATTGACGATGTGAAAAATGAT
GGTAAGGAATCGAAAATTGAGACCAAGGGGGAAAAGGGTAGAACAAGGCAGGTTCTTGGT
ACTAGGGACAATAATGGGGATTTGGACGAAACTAAGGTTTCGGATAGGCCTCAGCGGTTC
TCATCTCCGGCAGGTGCGAAAAGATCAGTCTCTGCTGGGAAGAAGAATGTGGCGGTTGCG
GAGAGAGATCCGTCTCCAGCAGGGAAAGGGAAGAGGTCAGCGTCACCAGTACCATCTAAG
TGTATGGTTCCTAGTTTGGTTGTGGCACGAGAAGAGAATAGGAAGACATCGAGGGAACCT
GCAATTATAGTGCCTTCGAGGTATAGGCAGCCATCTCCAAATGGGCGGAAACAGGCCTCA
CCCAATGCAAGGAGAGCTTCAATTTCTCCAGGGAGAAGGTTGTCAGGCGGTTTGAAGTTT
TCGCCTGCTGTTGGGGGTGCCCCAGATTCTACTAGCAAGAAGAAGATGGCAACTATAGTT
GCTGGGATTTCAAAGGTTTCTGAAGCTCTGGTTGGGTCTGCAAAGGCAGGTAGGAAGAGT
TGGGACGAACCACCAGCGGCGGTGGGCTCTGGGGAGCTGAAAGAGAAAAGCCTTGCAAAA
ATTAAACCAGATGTGCAAGCTATTTTGCGAACTCAGGCTGCTATTTCTAGGCGTCTAAGT
GATGTGCATGGTCGACAAGCAAACCAGGATGATTCTTCTACCAATGAGAAAACAAAACCT
AACTCAGCAGAAGGATGTCTGGTACCAGAGAAGCCGACCTGTGAGGCTCCAGCAATTACA
GTTCATGAGAAGAAATGGACTGATGGCAGTGTTCCATTGGATACAGTCTCTTCCAGCCTT
GCAAAACTAGGAAAGGAGGCTATGCAAAGGAGAGTTCTTGCTTCTAAAGCCGCAGCTGAA
GCTTTGGAAGAGGCCACTGCTACGGAGTCTATTATAAGGAGTTTAAGCATGTTTTCGGAG
CTTTGTTCAAAATGCAAGGTTGGAAATCCTTTACCCACTATAGATCGATTTTTGTCAATC
TATGATGAAGTCATGAGATCAACCGCATTCGCTGAATCAGTTAGCACTTGTCACCGCTCT
GACATACCTCATGACAGTTCAAATTCTACTTCTCTTTGGGTTGAAGCTGCTTTAGCCACT
GATCTTGGCATAGTCTCACTCCTAACGGGACTGAATATCGACTCTCAGCCAACATTGCAG
AAGAGTACATCAAAACGACAGGCTCTCACTGCACCTGCCAAAAACCATCTGAAGGTTTCC
TCATTGCCAGCTTCAGATCCTACTATCGGTTCATGGACGAGGGGTAATGGGATGAAAGAG
ACCATAGAACTTGCAATGAATTTGCAGTCTGAGATGCAAATGTGGTTTGTGAAGTTTGTT
GAGGAGTCCCTAGATGCAGGTTTCCGGGTGTTTAGGGAGTCCAAGGCTGATGTCTGCAGC
ATGCTGCCTCCAGAATGTGGCCCAATTGCAGCAATCTTATCACAGTTGAAGAGAGTAAAC
GATTGGTTAGATCGCGTGGCTTCAAAACAAGATGAGTTGCTGACAGAAAAGATCGAACGA
TTAAAGAGAAAGATCTATGGATTTGTTATTCATCATGTGGGAACAAGTCTGGATAACTCC
TCCTCCATTCCTTCCTCTTGCATCTCCATGTCCTAG