Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g04250.t01
CDS Infomation

cds chromosome:12X:11:3539907:3550311:1 gene:VIT_11s0016g04250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGGCTAACAAACACTCTTCCCTCCCACCCATTCACTCACTGCAACTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAGATGCAGCTTCTTCATGCTCCATCTTCA
CTACACCTCTCCTTCAATAACTCAAGACCACAGTCAGAGAAATCTTTTCTTTTATCCTCC
GTTTGTTGTTCTTCTCATCCTCAAAGACACCACAAGCCTACATGGATTTCATACAAACGC
TCCGTTTTGAGCTCAATCACTCCCAAATCTGCTTCAGCTAGTACTTCTGCCATATCAAGT
GGAACAGCTGAGGCCGATGTATTGAAAGCCTTGTCACAAATTATTGATCCAGATTTTGGG
ACAGACATTGTCTCATGTGGGTTTGTGAAAGATCTACAGATCAATGAAGCATTGGGAGAG
GTTTCATTTCGGTTAGAGCTCACTACACCAGCATGTCCAATCAAGGACATGTTTGAGCAG
AAAGCAAATGAGGTGGTGGCAATGCTTCCTTGGGTAAAAAATGTCAATGTAACAATGTCA
GCACAACCTGCAAGGCCTGTTTTTGCAGGGCAGCTTCCAGCAGGGTTGCAAACAATTTCA
AATATCATAGCAGTTTCAAGTTGCAAGGGTGGGGTTGGAAAATCAACTGTAGCTGTAAAC
CTTGCATACACTCTGGCCGGTATGGGCGCTAGAGTTGGAATCTTTGATGCTGATGTCTAT
GGTCCAAGTTTACCAACAATGGTCTCCCCTGAAAATAGGCTGCTAGAAATGAACCCAGAG
AAGAGAAGCATAATTCCAACTGAGTACTTGGGAGTCAAGCTGGTATCTTTTGGTTTTGCC
GGACAAGGTCGTGCAATAATGCGAGGTCCAATGGTTTCCGGTGTCATCAATCAACTTTTG
ACTACTACTGAGTGGGGAGAGCTGGACTACCTTGTTATTGACATGCCCCCTGGAACTGGT
GATATTCAACTTACTTTGTGCCAGGTTGTTCCACTAACAGCTGCGGTTATTGTTACCACC
CCACAGAAGCTAGCCTTCATTGATGTTGCAAAAGGAGTCCGTATGTTTTCAAAACTTAAG
GTCCCCTGTGTTGCTGTTGTTGAGAATATGTGTCACTTTGATGCTGATGGCAAGCGATAT
TACCCATTTGGCAGGGGTTCAGGCTCTCAGGTTGTCCAGCAGTTCGGAATTCCCCATCTG
TTTGATCTTCCCATTAGACCAACCCTATCTGCTTCTGGAGATAGTGGAATGCCTGAAGTG
GTTGCTGACCCTCTAGGTGAAATTGCGCAGACATTCCAGAACCTTGGAGTCTGTGTTGTC
CAACAGTGTGCCAAGATTCGCCAACAAGTGTCAACAGCTGTCACCTATGATAAATTTATC
AAAGCAATCAGAGTGAAAGTACCAGATTCAGAAGAAGAGTTCCTTCTGCATCCTGCTACT
GTAAGACGGAATGATCGATCTGCCCAAAGTGTGGATGAATGGACTGGAGAGCAAAAACTA
CAGTATGCTGATGTTCCGGAAGATATTGAGCCTGAAGAAATTCGGCCAATGGGAAATTAT
GCTGTATCAATAACATGGCCAGATGGATTTAGCCAGATTGCTCCCTATGATCAGCTGCAG
ACAATAGAGCGGTTGGTCGATGTTCCTCAACTAACTCCTGCACAGGCATGA

Peptide Sequence

PEP ID

VIT_11s0016g04250.t01
PEP Infomation

pep chromosome:12X:11:3539907:3550311:1 gene:VIT_11s0016g04250 transcript:VIT_11s0016g04250.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRLTNTLPSHPFTHCNSLSLSLSLSLSLSLKMQLLHAPSSLHLSFNNSRPQSEKSFLLSS
VCCSSHPQRHHKPTWISYKRSVLSSITPKSASASTSAISSGTAEADVLKALSQIIDPDFG
TDIVSCGFVKDLQINEALGEVSFRLELTTPACPIKDMFEQKANEVVAMLPWVKNVNVTMS
AQPARPVFAGQLPAGLQTISNIIAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVY
GPSLPTMVSPENRLLEMNPEKRSIIPTEYLGVKLVSFGFAGQGRAIMRGPMVSGVINQLL
TTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLK
VPCVAVVENMCHFDADGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEV
VADPLGEIAQTFQNLGVCVVQQCAKIRQQVSTAVTYDKFIKAIRVKVPDSEEEFLLHPAT
VRRNDRSAQSVDEWTGEQKLQYADVPEDIEPEEIRPMGNYAVSITWPDGFSQIAPYDQLQ
TIERLVDVPQLTPAQA

Transcript Sequence

Transcript ID

VIT_11s0016g04250.t01
Transcript Infomation

cdna chromosome:12X:11:3539907:3550311:1 gene:VIT_11s0016g04250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGGCTAACAAACACTCTTCCCTCCCACCCATTCACTCACTGCAACTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAGATGCAGCTTCTTCATGCTCCATCTTCA
CTACACCTCTCCTTCAATAACTCAAGACCACAGTCAGAGAAATCTTTTCTTTTATCCTCC
GTTTGTTGTTCTTCTCATCCTCAAAGACACCACAAGCCTACATGGATTTCATACAAACGC
TCCGTTTTGAGCTCAATCACTCCCAAATCTGCTTCAGCTAGTACTTCTGCCATATCAAGT
GGAACAGCTGAGGCCGATGTATTGAAAGCCTTGTCACAAATTATTGATCCAGATTTTGGG
ACAGACATTGTCTCATGTGGGTTTGTGAAAGATCTACAGATCAATGAAGCATTGGGAGAG
GTTTCATTTCGGTTAGAGCTCACTACACCAGCATGTCCAATCAAGGACATGTTTGAGCAG
AAAGCAAATGAGGTGGTGGCAATGCTTCCTTGGGTAAAAAATGTCAATGTAACAATGTCA
GCACAACCTGCAAGGCCTGTTTTTGCAGGGCAGCTTCCAGCAGGGTTGCAAACAATTTCA
AATATCATAGCAGTTTCAAGTTGCAAGGGTGGGGTTGGAAAATCAACTGTAGCTGTAAAC
CTTGCATACACTCTGGCCGGTATGGGCGCTAGAGTTGGAATCTTTGATGCTGATGTCTAT
GGTCCAAGTTTACCAACAATGGTCTCCCCTGAAAATAGGCTGCTAGAAATGAACCCAGAG
AAGAGAAGCATAATTCCAACTGAGTACTTGGGAGTCAAGCTGGTATCTTTTGGTTTTGCC
GGACAAGGTCGTGCAATAATGCGAGGTCCAATGGTTTCCGGTGTCATCAATCAACTTTTG
ACTACTACTGAGTGGGGAGAGCTGGACTACCTTGTTATTGACATGCCCCCTGGAACTGGT
GATATTCAACTTACTTTGTGCCAGGTTGTTCCACTAACAGCTGCGGTTATTGTTACCACC
CCACAGAAGCTAGCCTTCATTGATGTTGCAAAAGGAGTCCGTATGTTTTCAAAACTTAAG
GTCCCCTGTGTTGCTGTTGTTGAGAATATGTGTCACTTTGATGCTGATGGCAAGCGATAT
TACCCATTTGGCAGGGGTTCAGGCTCTCAGGTTGTCCAGCAGTTCGGAATTCCCCATCTG
TTTGATCTTCCCATTAGACCAACCCTATCTGCTTCTGGAGATAGTGGAATGCCTGAAGTG
GTTGCTGACCCTCTAGGTGAAATTGCGCAGACATTCCAGAACCTTGGAGTCTGTGTTGTC
CAACAGTGTGCCAAGATTCGCCAACAAGTGTCAACAGCTGTCACCTATGATAAATTTATC
AAAGCAATCAGAGTGAAAGTACCAGATTCAGAAGAAGAGTTCCTTCTGCATCCTGCTACT
GTAAGACGGAATGATCGATCTGCCCAAAGTGTGGATGAATGGACTGGAGAGCAAAAACTA
CAGTATGCTGATGTTCCGGAAGATATTGAGCCTGAAGAAATTCGGCCAATGGGAAATTAT
GCTGTATCAATAACATGGCCAGATGGATTTAGCCAGATTGCTCCCTATGATCAGCTGCAG
ACAATAGAGCGGTTGGTCGATGTTCCTCAACTAACTCCTGCACAGGCATGATAGCTTCAA
GTGAAAACTGGGTACAGACAAGGTTGTGACAAATCCTAAACAACGCGGTTATCTGAAACG
GAAGACGTCAGAGCTCCAGCTGTTAGAGATTCTGAAGTTATATATCTATTTTTTTTTCCT
TTTTTTATTTATTTAATTTCCTATTGATATTTTGATTTTGGGCATTCTTGTGACATTTCA
ATAGCAAAAAAATGAAATATATGAGGAGCAGTTGGTTTATATTTCAAATTTTCACATTTA
AGCAGTGTCAGAAAATTTTGTACTCGTACCCTAAAGAGTAGGACCCTTGGGCTAATGAGA
AGTAACAGATTATGAACTTTCTGGATTTATAAT