Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g04190.t01
CDS Infomation

cds chromosome:12X:11:3457655:3460515:1 gene:VIT_11s0016g04190 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGAAGAAGACCCATCTCCTCCATTTTGTTCTTCTTCACTCTCTCCTCTTCTTGGGC
TGCCTCGCTCTCTGTTCTGCGGAGCAGATCTCTATTTCCAGCCATGGCCACCTCACTGAC
GCGGAAGTTATGTACATTAAGCGGCGTCAACTTCTGTACTACAGAGACGAGTTTGGTGAC
AGAGGGGAGGATGTGACTGTGGATCCTTCTCTGGTGTTTGAGAACCCTAGGCAGAGGAAC
GCCTACATTGCGTTGCAAGCTTGGAAACAGGCCATTCTATCTGATCCTCTTAATCTTACG
CTCAACTGGGTTGGATCTAATGTGTGTAACTACACCGGGGTTTACTGCGCACAAGCTCCG
GACAATTCGTCCATCCGTACCGTCGCCGGCATTGATCTCAACCATGGAGACATCGCCGGG
TACTTGCCGGAGGAGCTAGGTCTGCTAACTGATCTTGCATTGTTCCACATCAACTCCAAC
CGCTTCTGTGGGACTGTTCCGCATAAGTTTGCGAAGCTCAAGATACTGTTTGAATTGGAT
CTCAGCAACAATAGGTTCGCCGGGAAGTTCCCGGAAGTGGTGCTTCACTTGCCAACGCTG
AAATTCTTAGATCTGCGATTCAATGAGTTTGAAGGAACCGTGCCGAAGGAGCTGTTTGAT
AAGGATTTGGACGCCATTTTCATCAACCACAACAGGTTCGCCTTCGATCTGCCTGACAAC
TTCGGTAACTCGCCGGTGTCGGTGATAGTTGTAGCGAACAACAAGCTCCACGGCTGCGTG
CCGGCGAGTCTGGGCAACATGGCGGACACGCTGAATGAGATAATTCTGATGAATAATCAG
TTCCGATCGTGCTTGCCTGTTGAGATCGGATTGTTGAAGAATTTAACTGTGTTGGATGTC
AGTTACAATGGATTGTTGGGACCGTTGCCGAAAGAGATTGGTGGAATGGTGGAGCTTGAG
CAGCTCAATGTGGCTCACAATATGCTCTCTGGGAGTATTCCTGCCAGTATTTGTAAGCTT
CCAAATCTTGAAAATTTTACATTTTCATATAATTTCTTCACCGGCGAGCCACCGGCATGT
TTGGGTTTGGCGGATTTCGAAGATAGGAGGAATTGCTTGCCAGGGAGGCCGGAGCAGAGG
TCCGCCGGGCAATGTAACTCGTTTTTGTCCCGACCTGTTGATTGTAGCTCTTTCAGGTGT
TCTCCTTTTGTTCCTTCTTTACCTACTCCCCCACCACCCTCACCACCGGTGTTCCCCTCT
CCACCCCCGACACCGGTTTACTCACCTCCACCGGTGTTCTCGCCTCCGCCACCGGTGCTC
TCTTCCCCACCACCACCATCACCGCCACCGCCATCTCCTTCGCCTCCACCACCTCCAGTT
TACTCCCCTCCTCCACCTCCACCAGTTTACTCACCTCCACCACCCCCTCCTCCCCCACCG
CCACCACCACCTGTTTATTTTCCGCCACCACCTCCACCTTCACCACCACCACCGTCTCCC
CCTCCACCCTCACCCCCACCACCTTCTCCATCACCGCCTCCCCCTCCCTCGCCACCACCA
CCGGTATTATCGCCCCCGCCTCCAGTTTATTGCGTCCGTTCCCCACCACCGCCACCGCCA
AATTCTCCCCCGCCTCCCATTTATTCTCCACCACCACCTCCAGTTCATTCACCGCCCCCA
CCAAGTCCTTACTATAGTTCACCACCGCCCCCGCCGCCACATCATTCACCTCCACCACCT
CCCCACTCGCCACCCCCGCCTCCACCTATCTATCCATACGCATCACCGCCACCGCCACCC
GTGCATTCCCCACCACCACCTGTCCATTCTCCACCACCTCCATGCATAGAACCGCCTCCT
CCTTCTCCACCACCCCCATCACCACCTCCATGCATAGAACCGCCTCCTCCTCCTTCTCCA
CCACCATGTGTAGAATATTCGCCACCTCCACCATCACCACACTCACCACCGCCACCACCA
GTTCATTACTTGCCTCCACCATCACCATCACCCCCACCACCACCTGTGTATGCTTCTCCG
CCACCTCCACCATCTCTGCCTCCCCCAGTTTACTACCATTCTCCGCCCCCACCCTCACCA
CCTCCTCCAACCCCATGTGAAAATCCTCCACCTACTCCATCACCACCGCCCCCAATCATT
TATGAGAGCCCACCACCTCCAACCCCTGTATATGAGGGGCCATTGCCACCAATCTTTGGA
GTTTCATACGCTTCTCCACCGCCACCACCCTTCTATTGA

Peptide Sequence

PEP ID

VIT_11s0016g04190.t01
PEP Infomation

pep chromosome:12X:11:3457655:3460515:1 gene:VIT_11s0016g04190 transcript:VIT_11s0016g04190.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKKKTHLLHFVLLHSLLFLGCLALCSAEQISISSHGHLTDAEVMYIKRRQLLYYRDEFGD
RGEDVTVDPSLVFENPRQRNAYIALQAWKQAILSDPLNLTLNWVGSNVCNYTGVYCAQAP
DNSSIRTVAGIDLNHGDIAGYLPEELGLLTDLALFHINSNRFCGTVPHKFAKLKILFELD
LSNNRFAGKFPEVVLHLPTLKFLDLRFNEFEGTVPKELFDKDLDAIFINHNRFAFDLPDN
FGNSPVSVIVVANNKLHGCVPASLGNMADTLNEIILMNNQFRSCLPVEIGLLKNLTVLDV
SYNGLLGPLPKEIGGMVELEQLNVAHNMLSGSIPASICKLPNLENFTFSYNFFTGEPPAC
LGLADFEDRRNCLPGRPEQRSAGQCNSFLSRPVDCSSFRCSPFVPSLPTPPPPSPPVFPS
PPPTPVYSPPPVFSPPPPVLSSPPPPSPPPPSPSPPPPPVYSPPPPPPVYSPPPPPPPPP
PPPPVYFPPPPPPSPPPPSPPPPSPPPPSPSPPPPPSPPPPVLSPPPPVYCVRSPPPPPP
NSPPPPIYSPPPPPVHSPPPPSPYYSSPPPPPPHHSPPPPPHSPPPPPPIYPYASPPPPP
VHSPPPPVHSPPPPCIEPPPPSPPPPSPPPCIEPPPPPSPPPCVEYSPPPPSPHSPPPPP
VHYLPPPSPSPPPPPVYASPPPPPSLPPPVYYHSPPPPSPPPPTPCENPPPTPSPPPPII
YESPPPPTPVYEGPLPPIFGVSYASPPPPPFY

Transcript Sequence

Transcript ID

VIT_11s0016g04190.t01
Transcript Infomation

cdna chromosome:12X:11:3457655:3460515:1 gene:VIT_11s0016g04190 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TAAGGGAGGTTTTGCAGGAACTCAGTCGGGGTTGTTTGTGAGTCAGATGTCTGGTGTGAG
ATGAAGAAGAAGACCCATCTCCTCCATTTTGTTCTTCTTCACTCTCTCCTCTTCTTGGGC
TGCCTCGCTCTCTGTTCTGCGGAGCAGATCTCTATTTCCAGCCATGGCCACCTCACTGAC
GCGGAAGTTATGTACATTAAGCGGCGTCAACTTCTGTACTACAGAGACGAGTTTGGTGAC
AGAGGGGAGGATGTGACTGTGGATCCTTCTCTGGTGTTTGAGAACCCTAGGCAGAGGAAC
GCCTACATTGCGTTGCAAGCTTGGAAACAGGCCATTCTATCTGATCCTCTTAATCTTACG
CTCAACTGGGTTGGATCTAATGTGTGTAACTACACCGGGGTTTACTGCGCACAAGCTCCG
GACAATTCGTCCATCCGTACCGTCGCCGGCATTGATCTCAACCATGGAGACATCGCCGGG
TACTTGCCGGAGGAGCTAGGTCTGCTAACTGATCTTGCATTGTTCCACATCAACTCCAAC
CGCTTCTGTGGGACTGTTCCGCATAAGTTTGCGAAGCTCAAGATACTGTTTGAATTGGAT
CTCAGCAACAATAGGTTCGCCGGGAAGTTCCCGGAAGTGGTGCTTCACTTGCCAACGCTG
AAATTCTTAGATCTGCGATTCAATGAGTTTGAAGGAACCGTGCCGAAGGAGCTGTTTGAT
AAGGATTTGGACGCCATTTTCATCAACCACAACAGGTTCGCCTTCGATCTGCCTGACAAC
TTCGGTAACTCGCCGGTGTCGGTGATAGTTGTAGCGAACAACAAGCTCCACGGCTGCGTG
CCGGCGAGTCTGGGCAACATGGCGGACACGCTGAATGAGATAATTCTGATGAATAATCAG
TTCCGATCGTGCTTGCCTGTTGAGATCGGATTGTTGAAGAATTTAACTGTGTTGGATGTC
AGTTACAATGGATTGTTGGGACCGTTGCCGAAAGAGATTGGTGGAATGGTGGAGCTTGAG
CAGCTCAATGTGGCTCACAATATGCTCTCTGGGAGTATTCCTGCCAGTATTTGTAAGCTT
CCAAATCTTGAAAATTTTACATTTTCATATAATTTCTTCACCGGCGAGCCACCGGCATGT
TTGGGTTTGGCGGATTTCGAAGATAGGAGGAATTGCTTGCCAGGGAGGCCGGAGCAGAGG
TCCGCCGGGCAATGTAACTCGTTTTTGTCCCGACCTGTTGATTGTAGCTCTTTCAGGTGT
TCTCCTTTTGTTCCTTCTTTACCTACTCCCCCACCACCCTCACCACCGGTGTTCCCCTCT
CCACCCCCGACACCGGTTTACTCACCTCCACCGGTGTTCTCGCCTCCGCCACCGGTGCTC
TCTTCCCCACCACCACCATCACCGCCACCGCCATCTCCTTCGCCTCCACCACCTCCAGTT
TACTCCCCTCCTCCACCTCCACCAGTTTACTCACCTCCACCACCCCCTCCTCCCCCACCG
CCACCACCACCTGTTTATTTTCCGCCACCACCTCCACCTTCACCACCACCACCGTCTCCC
CCTCCACCCTCACCCCCACCACCTTCTCCATCACCGCCTCCCCCTCCCTCGCCACCACCA
CCGGTATTATCGCCCCCGCCTCCAGTTTATTGCGTCCGTTCCCCACCACCGCCACCGCCA
AATTCTCCCCCGCCTCCCATTTATTCTCCACCACCACCTCCAGTTCATTCACCGCCCCCA
CCAAGTCCTTACTATAGTTCACCACCGCCCCCGCCGCCACATCATTCACCTCCACCACCT
CCCCACTCGCCACCCCCGCCTCCACCTATCTATCCATACGCATCACCGCCACCGCCACCC
GTGCATTCCCCACCACCACCTGTCCATTCTCCACCACCTCCATGCATAGAACCGCCTCCT
CCTTCTCCACCACCCCCATCACCACCTCCATGCATAGAACCGCCTCCTCCTCCTTCTCCA
CCACCATGTGTAGAATATTCGCCACCTCCACCATCACCACACTCACCACCGCCACCACCA
GTTCATTACTTGCCTCCACCATCACCATCACCCCCACCACCACCTGTGTATGCTTCTCCG
CCACCTCCACCATCTCTGCCTCCCCCAGTTTACTACCATTCTCCGCCCCCACCCTCACCA
CCTCCTCCAACCCCATGTGAAAATCCTCCACCTACTCCATCACCACCGCCCCCAATCATT
TATGAGAGCCCACCACCTCCAACCCCTGTATATGAGGGGCCATTGCCACCAATCTTTGGA
GTTTCATACGCTTCTCCACCGCCACCACCCTTCTATTGATTCTTTTGAGAATTTTCCTCC
TCTTGACATTTCCTCAAAGAAACAAAATTTACAATTATATTAGTGGTCATGGCCTCTTTT
CCCTGTTCTCCATCAAAACTTCTTCCTCTTTGGGCAATTCTCGTCGCCGGGTGAGGACTA
ATAAGAAGATTCAAAATGTCATAGAGCTTAATGAATTATTGCGGCAAAGGTGCTTCACCA
TGGTGGGTATTAGTTGTTGAAGAAGAAACAGAGAAGAGGCTAAAGAAAGAGGAGGTAAGA
GGAGAAAGTCTCTCCATATTTATTTGAATTGTTATGGATATTTGAGTTGTGAAATAAAAT
GGCAGAGAAAGATTAGGTTGCAGGAAAGTGTATGTATAGGGATGAATGGAGACCATAAGA
AGAGTTAGAAGGCAGCAGCACTTCTGCTGCTGCTGGTTTGTTGGTTTATTGTTATTATCT
CTGTTATATCATACTTTTATTTCTTTTGCTTTCCAATTTATAGTATAATCATGAACATTT
ACTTGTATTGATTTTCAGAATTCAGATCATTCCTTCTTCTC