Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g04170.t01
CDS Infomation

cds chromosome:12X:11:3413268:3417781:1 gene:VIT_11s0016g04170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAAACTCTCGTGAATCTGAAGTCACCGTGAATTTCTCCGACCGTCGGAACTTTGCC
ACCGTCCTCAGATCTGATCTCAAGGAGACCTTCTTTGCCGATGATCCTTTCCAGGAGTTC
CGGAATGAACCGCCGAAGCGTCGAACCATAAAAATCTTCCAATATTGTGTTCCCATGTTA
GAATGGCTACCCAAATATAATTTCCAATTCTTTAGATATGATTTTCTGGCGGGGATCACC
ATCGCCAGCCTCGCCATACCTCAGGGGATCAGTTACGCTAAGCTCGCTGAGATTCCTCCC
ATCATTGGCCTGTATTCGAGTTTTATCCCGCCTTTTGTGTACGCTGTGTTTGGGACCTCC
AAGTATCTTGCAGTGGGAACCATAGCTGCGTCGTCCTTGCTTATAGCTTCTACCATTAAA
GAAAAAGTGTCCCCGGATGAGGATCCAACATTGTATCTTAATTTGGTCTTCACGACTGCG
TTCTGCACTGGGATCTTACAGACAATCTTAGGTGTTCTAAGACTGGGGATTTTGGTGGAT
TTCTTATCGCATTCCACCATCACCGGCTTCATGGGAGGCACAGCAACCATCATCAGTCTC
CAACAGCTCAAGGGTTTTCTTGGATTGAAGCAATTCACTACTAAAACTAATGTCGTCTCC
GTTCTGAAAGCCGTCTTCAAGTTTAGACACCAGTGGAGATGGGAGAGTGCGCTATTAGGC
ATAATCTTCCTTTCTTTCCTCCTCTTCACAGTACAACTGAGGAAGAAGAAACCACAGCTA
TTTTGGGTGTCAGCAGTGGCTCCAATGGTGACAGTGGTAATCGGGTGCATCATTGCCTAT
TTCGCTGACGGGGATAAACATGGAATCCACACTGTTGGTCCTTTGAAGAAAGGATTGAAT
CCCATTTCCATCTACGATTTGAACTTCAACTCTGCCTATATAATGGCGCCCATAAAAGCG
GGCTTGCTTACAGGCATCTTGGCTACAACCGAAGGGATAGCAATAGGAAGGAGCTTTGCC
ATGAAGAGAAATGAGCAAACTGATGGAAACAAAGAGATGATAGCCTTTGGTCTGATGAAC
CTTGTTGGATCTTTCACTTCTTGTTATTTGACTACTGGCCCATTTTCAAAAACTGCTGTC
AATTTCAATGCCGGGGCTAGGACACCAATGGCCAATGTAGTGATGGCACTCTGTATGATG
CTGATTCTCCTCTTCTTGGCTCCTGTCTTTCGTTACACCCCTCAGGTAGCTCTCTCTGCC
ATTATCACCGTAGCCATGCTTGGACTCATCAAGTACGACGAGGTTTATCATCTCTACAAG
GTCGACAAGTTTGATTTCTGTATTTGCATGGCTGCATTTTTGGGAGTCATCTTCATTACC
ATGGATATGGGACTAATGATCTCAGTATGCCTTTCAATCGTCCGAGCACTTCTCTATGTG
GCTAGGCCTGCTACTTGCAAGCTCGGGAACATTCCAAACTCAGCACTCTACCGCGACGTA
GAGCAATATCCTGCTGCAAGCGGGGTCCCGGGCATCATAGTTCTTCAACTGGGTTCCCCA
ATTTACTTTGCAAATTGCATTTACCTTAAAGAAAGGATTATGAGGTGGGTTAGGGATGAA
CAAGGCAATCCGAACTCCAAAACAGCAGATATTGAGCATGTTTTACTAGATTTGGGAGGA
GTTACCACTATTGACATGACAGGCATCGAAACCCTGGTTGAAATCCGAAGAAACATTTTA
GCAAAAGGAATTAAGATGGGAATAATAAACCCCAGAATCAATGTGTTGGAGAAGATGATG
CTTTCCAAATTCGTGGACCTCATAGGCAAGGAATCTATCTTCTTATCAGTTGAAGATGCA
GTCAAGACATGTCAATTTTCACTCAATCAATCGCCTCAGAAGGGTGACTCTTAG

Peptide Sequence

PEP ID

VIT_11s0016g04170.t01
PEP Infomation

pep chromosome:12X:11:3413268:3417781:1 gene:VIT_11s0016g04170 transcript:VIT_11s0016g04170.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MENSRESEVTVNFSDRRNFATVLRSDLKETFFADDPFQEFRNEPPKRRTIKIFQYCVPML
EWLPKYNFQFFRYDFLAGITIASLAIPQGISYAKLAEIPPIIGLYSSFIPPFVYAVFGTS
KYLAVGTIAASSLLIASTIKEKVSPDEDPTLYLNLVFTTAFCTGILQTILGVLRLGILVD
FLSHSTITGFMGGTATIISLQQLKGFLGLKQFTTKTNVVSVLKAVFKFRHQWRWESALLG
IIFLSFLLFTVQLRKKKPQLFWVSAVAPMVTVVIGCIIAYFADGDKHGIHTVGPLKKGLN
PISIYDLNFNSAYIMAPIKAGLLTGILATTEGIAIGRSFAMKRNEQTDGNKEMIAFGLMN
LVGSFTSCYLTTGPFSKTAVNFNAGARTPMANVVMALCMMLILLFLAPVFRYTPQVALSA
IITVAMLGLIKYDEVYHLYKVDKFDFCICMAAFLGVIFITMDMGLMISVCLSIVRALLYV
ARPATCKLGNIPNSALYRDVEQYPAASGVPGIIVLQLGSPIYFANCIYLKERIMRWVRDE
QGNPNSKTADIEHVLLDLGGVTTIDMTGIETLVEIRRNILAKGIKMGIINPRINVLEKMM
LSKFVDLIGKESIFLSVEDAVKTCQFSLNQSPQKGDS

Transcript Sequence

Transcript ID

VIT_11s0016g04170.t01
Transcript Infomation

cdna chromosome:12X:11:3413268:3417781:1 gene:VIT_11s0016g04170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAAACTCTCGTGAATCTGAAGTCACCGTGAATTTCTCCGACCGTCGGAACTTTGCC
ACCGTCCTCAGATCTGATCTCAAGGAGACCTTCTTTGCCGATGATCCTTTCCAGGAGTTC
CGGAATGAACCGCCGAAGCGTCGAACCATAAAAATCTTCCAATATTGTGTTCCCATGTTA
GAATGGCTACCCAAATATAATTTCCAATTCTTTAGATATGATTTTCTGGCGGGGATCACC
ATCGCCAGCCTCGCCATACCTCAGGGGATCAGTTACGCTAAGCTCGCTGAGATTCCTCCC
ATCATTGGCCTGTATTCGAGTTTTATCCCGCCTTTTGTGTACGCTGTGTTTGGGACCTCC
AAGTATCTTGCAGTGGGAACCATAGCTGCGTCGTCCTTGCTTATAGCTTCTACCATTAAA
GAAAAAGTGTCCCCGGATGAGGATCCAACATTGTATCTTAATTTGGTCTTCACGACTGCG
TTCTGCACTGGGATCTTACAGACAATCTTAGGTGTTCTAAGACTGGGGATTTTGGTGGAT
TTCTTATCGCATTCCACCATCACCGGCTTCATGGGAGGCACAGCAACCATCATCAGTCTC
CAACAGCTCAAGGGTTTTCTTGGATTGAAGCAATTCACTACTAAAACTAATGTCGTCTCC
GTTCTGAAAGCCGTCTTCAAGTTTAGACACCAGTGGAGATGGGAGAGTGCGCTATTAGGC
ATAATCTTCCTTTCTTTCCTCCTCTTCACAGTACAACTGAGGAAGAAGAAACCACAGCTA
TTTTGGGTGTCAGCAGTGGCTCCAATGGTGACAGTGGTAATCGGGTGCATCATTGCCTAT
TTCGCTGACGGGGATAAACATGGAATCCACACTGTTGGTCCTTTGAAGAAAGGATTGAAT
CCCATTTCCATCTACGATTTGAACTTCAACTCTGCCTATATAATGGCGCCCATAAAAGCG
GGCTTGCTTACAGGCATCTTGGCTACAACCGAAGGGATAGCAATAGGAAGGAGCTTTGCC
ATGAAGAGAAATGAGCAAACTGATGGAAACAAAGAGATGATAGCCTTTGGTCTGATGAAC
CTTGTTGGATCTTTCACTTCTTGTTATTTGACTACTGGCCCATTTTCAAAAACTGCTGTC
AATTTCAATGCCGGGGCTAGGACACCAATGGCCAATGTAGTGATGGCACTCTGTATGATG
CTGATTCTCCTCTTCTTGGCTCCTGTCTTTCGTTACACCCCTCAGGTAGCTCTCTCTGCC
ATTATCACCGTAGCCATGCTTGGACTCATCAAGTACGACGAGGTTTATCATCTCTACAAG
GTCGACAAGTTTGATTTCTGTATTTGCATGGCTGCATTTTTGGGAGTCATCTTCATTACC
ATGGATATGGGACTAATGATCTCAGTATGCCTTTCAATCGTCCGAGCACTTCTCTATGTG
GCTAGGCCTGCTACTTGCAAGCTCGGGAACATTCCAAACTCAGCACTCTACCGCGACGTA
GAGCAATATCCTGCTGCAAGCGGGGTCCCGGGCATCATAGTTCTTCAACTGGGTTCCCCA
ATTTACTTTGCAAATTGCATTTACCTTAAAGAAAGGATTATGAGGTGGGTTAGGGATGAA
CAAGGCAATCCGAACTCCAAAACAGCAGATATTGAGCATGTTTTACTAGATTTGGGAGGA
GTTACCACTATTGACATGACAGGCATCGAAACCCTGGTTGAAATCCGAAGAAACATTTTA
GCAAAAGGAATTAAGATGGGAATAATAAACCCCAGAATCAATGTGTTGGAGAAGATGATG
CTTTCCAAATTCGTGGACCTCATAGGCAAGGAATCTATCTTCTTATCAGTTGAAGATGCA
GTCAAGACATGTCAATTTTCACTCAATCAATCGCCTCAGAAGGGTGACTCTTAGGATGAC
TGTGTTGCTGCATT