Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g04150.t01
CDS Infomation

cds chromosome:12X:11:3381620:3385693:-1 gene:VIT_11s0016g04150 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTGTAGACTCAAAGAGAGTAGAAGCAGATTCTTCAGCTGTTTCAACCCCTGAAACT
CCTTTCAATCTTACGCTCTCAATAGGCCCAGTGTTGTTGCAGCCTCTGGAGATACATAGA
GTTTGTTTGCCACCCCAGAAAACTACATTTCAGAAACTCAAGCACAGACTGTCTGAGATT
TTCTTCCCTGATGATCCTTTCCACAGATTCAAGAACCAGACTTTTCTCAGGAAAGTGGTT
CTGGGTCTCCATTGTCTTTTCCCTATACTGCAGTGGGTGCCTAGTTACAGTCTCAGTACT
TTTAGATCTGATCTCGTCTCTGGACTCACCATTGCTAGCCTGGCCATTCCTCAGGGAATC
AGTTATGCCAAGCTTGCAAACTTGCCTCCTATAATTGGACTTTATTCAAGTTTTGTGCCA
CCATTAATATATTCTCTTCTTGGGAGCTCTAAACATCTTGGTGTGGGTCCAGTTTCAATA
GCATCCTTGGTCATGGGCACAATGCTAAGTGAAACAGTCTCTTCTACTCATGAATCAGAT
CTCTATCTTAGACTTGCTTTCACTGCTACCTTCTTTGCTGGTTTGTTTCAAGCTTCTTTA
GGTTTGTTCAGGTTAGGCTTCATAATTGATTTTCTTTCTAAAGCGACACTGGTTGGTTTC
ATGGCTGGAGCAGCAGTTATTGTGTCCTTGCAGCAGCTAAAAGGATTGCTTGGGATTGTT
CACTTCACTAAAAAAATGCAGATCATCCCTGTAATGTCCTCTGTTTTCGGCCACACAAAA
GAGTGGTCCTGGAAAACCATTGTGTTAGGTTTCGGTTTCCTAATATTTCTACTAACAGCA
AGGTTGACTAGCTTGAAGAGACCAAAGCTTTTCTGGATTTCAGCAGCAGCTCCATTAACT
TCTGTTATTCTGTCAACTCTTTTAGTCTACCTACTCAAATCTGAACTTCATGGTGTTTCA
GTGATTGGTGAATTGCCAGATGGTCTGAACCCACCTTCAGCAAACATACTATATTTCCAT
GGCCCTCATCTAGGCCTTGCTATCAAAGCAGGCATTGTGACAGGGATATTATCACTCACT
GAAGGAATTGCAGTGGGAAGAACATTTGCTTCTCTGCAAAATTATCAAGTTGATGGAAAC
AAAGAGATGATGGCAATTGGTCTAATGAATATGGTTGGTTCTTGCTCATCATGCTATGTT
ACTACAGGGTCATTCTCCCGATCTGCTGTAAACTACAATGCTGGAGCAAAAACAGCCTTT
TCAAACATAGTGATGGCAGGAGCAGTGCTTGTGACACTGCTATTTCTCATGCCACTGTTC
TATCACACTCCAAATTTAGTCTTAGCAGCGATCATCATTACTGCAGTGATTGGGTTGATA
GACTACAATGCTGCATTTCTGTTGTGGAAGCTTGACAAGCTTGAGTTTTTGGCCTGCTTG
TGCTCTTTCTTTGGTGTCTTATTTATCTCTGTGCCAATGGGTCTCGCCATTTCTGTTGGA
GTTTCAGTATTCAAGATTCTCCTGCATGTTACCAGGCCTAACACCGTGGCATTGGGGAAT
ATCCCCGGTACTCAAATATACCAAAATGTCAGTCGCTATGAGAATGCTTCAAGAGTTCCA
TGCTTCCTCATCCTAGGCATTGAATCTCCCATCTATTTTGCAAATTCAACTTATCTTCAA
GAAAGGATATTAAGATGGGTTTGGGAAGAGGAAGAGAGGCTTAAAGAAAAGGAGGAGAAT
CTGAAATGTGTGGTTTTGGATATGACAGCAGTGACAGCCATAGATAGCAGCGGTATTGAT
GCTATATATGAACTTAGAAAGACACTGCTGAATAGATCAGTTCAGCTGGTGTTGGTAAAT
CCTGTTGGAAGCGTAATGGAAAAGCTCCATCACTCAAAAATCCTTGATTTGTTTGGAACA
AACCAACTTTATTTGACAGTTGGAGAGGCAGTAACTGACATATCATCTTCATGGAAGGCT
TAG

Peptide Sequence

PEP ID

VIT_11s0016g04150.t01
PEP Infomation

pep chromosome:12X:11:3381620:3385693:-1 gene:VIT_11s0016g04150 transcript:VIT_11s0016g04150.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGVDSKRVEADSSAVSTPETPFNLTLSIGPVLLQPLEIHRVCLPPQKTTFQKLKHRLSEI
FFPDDPFHRFKNQTFLRKVVLGLHCLFPILQWVPSYSLSTFRSDLVSGLTIASLAIPQGI
SYAKLANLPPIIGLYSSFVPPLIYSLLGSSKHLGVGPVSIASLVMGTMLSETVSSTHESD
LYLRLAFTATFFAGLFQASLGLFRLGFIIDFLSKATLVGFMAGAAVIVSLQQLKGLLGIV
HFTKKMQIIPVMSSVFGHTKEWSWKTIVLGFGFLIFLLTARLTSLKRPKLFWISAAAPLT
SVILSTLLVYLLKSELHGVSVIGELPDGLNPPSANILYFHGPHLGLAIKAGIVTGILSLT
EGIAVGRTFASLQNYQVDGNKEMMAIGLMNMVGSCSSCYVTTGSFSRSAVNYNAGAKTAF
SNIVMAGAVLVTLLFLMPLFYHTPNLVLAAIIITAVIGLIDYNAAFLLWKLDKLEFLACL
CSFFGVLFISVPMGLAISVGVSVFKILLHVTRPNTVALGNIPGTQIYQNVSRYENASRVP
CFLILGIESPIYFANSTYLQERILRWVWEEEERLKEKEENLKCVVLDMTAVTAIDSSGID
AIYELRKTLLNRSVQLVLVNPVGSVMEKLHHSKILDLFGTNQLYLTVGEAVTDISSSWKA

Transcript Sequence

Transcript ID

VIT_11s0016g04150.t01
Transcript Infomation

cdna chromosome:12X:11:3381620:3385693:-1 gene:VIT_11s0016g04150 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTGTAGACTCAAAGAGAGTAGAAGCAGATTCTTCAGCTGTTTCAACCCCTGAAACT
CCTTTCAATCTTACGCTCTCAATAGGCCCAGTGTTGTTGCAGCCTCTGGAGATACATAGA
GTTTGTTTGCCACCCCAGAAAACTACATTTCAGAAACTCAAGCACAGACTGTCTGAGATT
TTCTTCCCTGATGATCCTTTCCACAGATTCAAGAACCAGACTTTTCTCAGGAAAGTGGTT
CTGGGTCTCCATTGTCTTTTCCCTATACTGCAGTGGGTGCCTAGTTACAGTCTCAGTACT
TTTAGATCTGATCTCGTCTCTGGACTCACCATTGCTAGCCTGGCCATTCCTCAGGGAATC
AGTTATGCCAAGCTTGCAAACTTGCCTCCTATAATTGGACTTTATTCAAGTTTTGTGCCA
CCATTAATATATTCTCTTCTTGGGAGCTCTAAACATCTTGGTGTGGGTCCAGTTTCAATA
GCATCCTTGGTCATGGGCACAATGCTAAGTGAAACAGTCTCTTCTACTCATGAATCAGAT
CTCTATCTTAGACTTGCTTTCACTGCTACCTTCTTTGCTGGTTTGTTTCAAGCTTCTTTA
GGTTTGTTCAGGTTAGGCTTCATAATTGATTTTCTTTCTAAAGCGACACTGGTTGGTTTC
ATGGCTGGAGCAGCAGTTATTGTGTCCTTGCAGCAGCTAAAAGGATTGCTTGGGATTGTT
CACTTCACTAAAAAAATGCAGATCATCCCTGTAATGTCCTCTGTTTTCGGCCACACAAAA
GAGTGGTCCTGGAAAACCATTGTGTTAGGTTTCGGTTTCCTAATATTTCTACTAACAGCA
AGGTTGACTAGCTTGAAGAGACCAAAGCTTTTCTGGATTTCAGCAGCAGCTCCATTAACT
TCTGTTATTCTGTCAACTCTTTTAGTCTACCTACTCAAATCTGAACTTCATGGTGTTTCA
GTGATTGGTGAATTGCCAGATGGTCTGAACCCACCTTCAGCAAACATACTATATTTCCAT
GGCCCTCATCTAGGCCTTGCTATCAAAGCAGGCATTGTGACAGGGATATTATCACTCACT
GAAGGAATTGCAGTGGGAAGAACATTTGCTTCTCTGCAAAATTATCAAGTTGATGGAAAC
AAAGAGATGATGGCAATTGGTCTAATGAATATGGTTGGTTCTTGCTCATCATGCTATGTT
ACTACAGGGTCATTCTCCCGATCTGCTGTAAACTACAATGCTGGAGCAAAAACAGCCTTT
TCAAACATAGTGATGGCAGGAGCAGTGCTTGTGACACTGCTATTTCTCATGCCACTGTTC
TATCACACTCCAAATTTAGTCTTAGCAGCGATCATCATTACTGCAGTGATTGGGTTGATA
GACTACAATGCTGCATTTCTGTTGTGGAAGCTTGACAAGCTTGAGTTTTTGGCCTGCTTG
TGCTCTTTCTTTGGTGTCTTATTTATCTCTGTGCCAATGGGTCTCGCCATTTCTGTTGGA
GTTTCAGTATTCAAGATTCTCCTGCATGTTACCAGGCCTAACACCGTGGCATTGGGGAAT
ATCCCCGGTACTCAAATATACCAAAATGTCAGTCGCTATGAGAATGCTTCAAGAGTTCCA
TGCTTCCTCATCCTAGGCATTGAATCTCCCATCTATTTTGCAAATTCAACTTATCTTCAA
GAAAGGATATTAAGATGGGTTTGGGAAGAGGAAGAGAGGCTTAAAGAAAAGGAGGAGAAT
CTGAAATGTGTGGTTTTGGATATGACAGCAGTGACAGCCATAGATAGCAGCGGTATTGAT
GCTATATATGAACTTAGAAAGACACTGCTGAATAGATCAGTTCAGCTGGTGTTGGTAAAT
CCTGTTGGAAGCGTAATGGAAAAGCTCCATCACTCAAAAATCCTTGATTTGTTTGGAACA
AACCAACTTTATTTGACAGTTGGAGAGGCAGTAACTGACATATCATCTTCATGGAAGGCT
TAGCCTCACCATAAGCGGAGAATAGATTGATTTTCAACAAGAATCTACACTCTGTGCCTC
AAGAGTGTACGATGGAGATTTCTGAAAAATTCTCATCCTGAGCTGACTTGTGGTTTGTAA
ACTATCCCTCACTCTCAAGTTGGTGTGATGTCCCAAGTGTCTACCATTTAAATGT