Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g04130.t01
CDS Infomation

cds chromosome:12X:11:3376824:3378266:-1 gene:VIT_11s0016g04130 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACGATACTGAAGATGATGCTGGGTACCCTCCGAAACGGTACTCCGTCAATCACCAT
TCCTCCTTCAATACGGCGCCGTCTTCCAACCGCCAGAAGCTTCCCGTGCGAAACGCCTCG
TATGCCCTTCAAGTCCCACCTCAATACGACGTCGTAGATGAGGAGGAGGACGACGAAGAC
AACGCCCAAGAAGAGGATGAATTGGACGAAGACGATGACGAGGAAGACGACGACGAGGAC
GACGATGTTATTGAACCCGCGGGAGACTCGGGGTTGAATCCGAAGAAGCGGAAGCTGAGG
GATTTGGTTAACAATTACGAGTTCGCCCCACGTGTGGTGCCGCCGCCGACCTCGAGGTTG
CCGTTCGGCGGACGGAATTCGTCGGCGGAGTGGACGGAGCACGAGACTTTCTTGTTGTTG
GAGGCGTGGGGAGAGAGGTTTGTTCAGCTTGGGAGGAAGAGTTTGAGGTCTGATGATTGG
GCCGATGTTGCAGAGAAGGTCTCGGAGGGTTCCAAGATTGAACGAACGGATATGCAGTGT
AGAAATCGATTGGATACGTTGAAGAAGAAGTACAAGAAGGAGAGGGCTAAAGTGGAGGAA
ATGGGAGGTGGGAATAGCAAATGGGTTTTCTACAAGAAGATGGATGCGTTAATGGGGTTG
TCGCCAACTCCAAGTCGGCAACAGTATGGGCTTGCTTGTGGGGTTGATTCCGGGGAATAC
GTGTTTATGAATCCCCGAGTTTATTTGAATAGGTCGAACGGATTGGATGAGATGAGGGAT
AGCCCTGGGAATTCGGAGTATGGTGATGATGATTCAGAGGGCCTTCCTCTGAAGAGGACT
AACCCGGGAGGGGACGATGAGGAGGGATCTTCAATTAGGTTGTTGGCAGATTCAATTGAG
AAGTTTGGTGAGATTTACGAGAAGATTGAGAAGACCAAGAGGCAGCAGATGATGGAGTTG
GAGAAGATGAGGATGGATTTTCATAGAGAATTGGAGTTGCGTAGGAAGGAGATGCTAGAG
AGAACTCAGGCAGAGATTGCAAAAATACGGCAAGGGGATGATGAAGACACTGATGCTTCA
GATGAGAACTACAGTGGTTGA

Peptide Sequence

PEP ID

VIT_11s0016g04130.t01
PEP Infomation

pep chromosome:12X:11:3376824:3378266:-1 gene:VIT_11s0016g04130 transcript:VIT_11s0016g04130.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDDTEDDAGYPPKRYSVNHHSSFNTAPSSNRQKLPVRNASYALQVPPQYDVVDEEEDDED
NAQEEDELDEDDDEEDDDEDDDVIEPAGDSGLNPKKRKLRDLVNNYEFAPRVVPPPTSRL
PFGGRNSSAEWTEHETFLLLEAWGERFVQLGRKSLRSDDWADVAEKVSEGSKIERTDMQC
RNRLDTLKKKYKKERAKVEEMGGGNSKWVFYKKMDALMGLSPTPSRQQYGLACGVDSGEY
VFMNPRVYLNRSNGLDEMRDSPGNSEYGDDDSEGLPLKRTNPGGDDEEGSSIRLLADSIE
KFGEIYEKIEKTKRQQMMELEKMRMDFHRELELRRKEMLERTQAEIAKIRQGDDEDTDAS
DENYSG

Transcript Sequence

Transcript ID

VIT_11s0016g04130.t01
Transcript Infomation

cdna chromosome:12X:11:3376824:3378266:-1 gene:VIT_11s0016g04130 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGAGGGAGTGAGATCAATTTCATGAATGGAGTCAAGATTGTGTACGGAAAATCGTGTTGC
CGAAAAGATCCGATGTTTGCCGAGGTGATGGAACCTCGATAGATTTACAGAGCCAAGTAG
TCAAAAACCTCGGCTCTCTCTATCTCTCTCTCTCTCCGACCTACAAAACCCTAACAAGAC
CATCCCCAACTCATGTCAATTAGGGTTTTCTGAATTTCGAGATTCGTTCTTCATATGATT
TGGTTTCAGATGACGGTTCCTGAAATTATGAAATCGGAATCTTTACGTTGAAATTAGGGT
CAGGTTTTGGTATTCGCAACTCTAAATTATCTGTGACATGGACGATACTGAAGATGATGC
TGGGTACCCTCCGAAACGGTACTCCGTCAATCACCATTCCTCCTTCAATACGGCGCCGTC
TTCCAACCGCCAGAAGCTTCCCGTGCGAAACGCCTCGTATGCCCTTCAAGTCCCACCTCA
ATACGACGTCGTAGATGAGGAGGAGGACGACGAAGACAACGCCCAAGAAGAGGATGAATT
GGACGAAGACGATGACGAGGAAGACGACGACGAGGACGACGATGTTATTGAACCCGCGGG
AGACTCGGGGTTGAATCCGAAGAAGCGGAAGCTGAGGGATTTGGTTAACAATTACGAGTT
CGCCCCACGTGTGGTGCCGCCGCCGACCTCGAGGTTGCCGTTCGGCGGACGGAATTCGTC
GGCGGAGTGGACGGAGCACGAGACTTTCTTGTTGTTGGAGGCGTGGGGAGAGAGGTTTGT
TCAGCTTGGGAGGAAGAGTTTGAGGTCTGATGATTGGGCCGATGTTGCAGAGAAGGTCTC
GGAGGGTTCCAAGATTGAACGAACGGATATGCAGTGTAGAAATCGATTGGATACGTTGAA
GAAGAAGTACAAGAAGGAGAGGGCTAAAGTGGAGGAAATGGGAGGTGGGAATAGCAAATG
GGTTTTCTACAAGAAGATGGATGCGTTAATGGGGTTGTCGCCAACTCCAAGTCGGCAACA
GTATGGGCTTGCTTGTGGGGTTGATTCCGGGGAATACGTGTTTATGAATCCCCGAGTTTA
TTTGAATAGGTCGAACGGATTGGATGAGATGAGGGATAGCCCTGGGAATTCGGAGTATGG
TGATGATGATTCAGAGGGCCTTCCTCTGAAGAGGACTAACCCGGGAGGGGACGATGAGGA
GGGATCTTCAATTAGGTTGTTGGCAGATTCAATTGAGAAGTTTGGTGAGATTTACGAGAA
GATTGAGAAGACCAAGAGGCAGCAGATGATGGAGTTGGAGAAGATGAGGATGGATTTTCA
TAGAGAATTGGAGTTGCGTAGGAAGGAGATGCTAGAGAGAACTCAGGCAGAGATTGCAAA
AATACGGCAAGGGGATGATGAAGACACTGATGCTTCAGATGAGAACTACAGTGGTTGATG
CAG