Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g04090.t01
CDS Infomation

cds chromosome:12X:11:3341776:3358113:1 gene:VIT_11s0016g04090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAACGTCAGAAATCTATATTATCTTTTTTTCAAAAACCCTCGCCGGAGGACCAAAAG
TGCGGAGGTTCATCAGCCGCCGACACATCCGCGGGCCGGAGCGTTTCTCAGTTTCCGGCG
AAGCAACGGAACCAAAACTTCGCTGTTGGTGATCAACCTACATTTCAGATCCCAAAGCAC
TCGTCTATGGAAATCACAGGTACGGACACTCCGCCGGAGAAGGTGCCACGTCAGATGATA
CCGGCCAGCTTCACCGCAAATGACGACAGAAAAGCTGCTTCTTCTTCTTCTTCTTTGTTC
TCAAGTATCATGCATAAGTTTGTGAAAGTTGATGAAAGAGAAAGCTCTTGCGAGAGGAAA
GAAATGCACAGTGGATCCTCTAATACTTGCTCGACATCTGTTAACAGTGACTGTGAAGTG
CTCCCTAAAGAAGGAAATGTGTTTCACAGTGATGCAAAGGAAAGTGGTTTTAATTCTACC
AAGCAAGTTAATCAAGTGTGTTCACTTCATAGTGAAAGTGGTGATGATGATATCATTGGG
CCTGAGACACCTGGTATGCGACCTTTTGTCCCCCGTTTGAAACGAATTCAAGAAGATAAC
TTTGAGAATAAGAATGAGTGTTCCTTGCTGGATTCTAGCAAAAGACTGAAGCTTCTTCAG
AATTCAACAACTGGAAACAAAAACTATGGGGAAGTATCTGATACAACTAGCAAGTTTGAA
TGGCTTGATCCTTCCCGAAAAAGGGATGCTAATAGGAGGAGGCCTGGTGATGCTCTTTAT
GATAAAAGGACACTTTATATACCGCCTGATGCTTTGCAGAAAATGTCAGCAAGTCAGAAA
CAATATTGGAGTATCAAATGCCAATATATGGATGTTGTTCTCTTCTTCAAAGTGGGAAAA
TTCTATGAGCTTTATGAACTAGATGCTGAAATTGGCCATAAGGAGCTTGATTGGAAAATG
ACATTTAGTGGTGTGGGGAAATGTCGACAGGTTGGTATTTCTGAGAGTGGGATTGATGAG
GCTGTGCAGAAGTTGATTGCTCGTGGATATAAAGTTGGACGAATGGAGCAGTTGGAGACA
TCTGAACAAGCAAAAGCCAGAGGTTCAACTTCAGTAATTCAAAGAAAACTAGTTCATGTA
GTCACACCATCAACTGCATGCGATGGCAACATTGGGCCTGATGCTGTTCATCTTCTTTCT
GTAAAGGAGGGTAACAACATATTGGAGAATGGTTCAGTTATATATGGGTTTGCTTTTGTT
GATTGTGCGGCCTTAAAATTTTGGATTGGATCCATAAGTGACGATGCTTCTTGTGCTGCT
TTGGGGGCTTTGTTGATGCAAGTGTCACCTAAGGAAGTCATATATGAAAACCAAGAGCTG
TCCAAAGAAGCTCAGAAAGCACTCAAGAAGTATTCATTATCAGGCTTCACTGCTTTGAAG
TTGACTCCTCTTCCGCTGTGCACTGATTTTGTGGATGCTTCAAAAGTAAGAAATCTGATT
CATTTGAAGGGGTACTTTAAAGGCTCTGATAATTCATGGGATCATGCACTTGATGGTGTC
ATGCACCATGATCTTGCTTTATGCGCTCTTGGTGGACTTCTTGGTCATTTGTCCAGGTTG
AAGTTGGATGATACTTTACGTAATGGAGATATTTTACCATACCAAGTCTATAGCGGTTGC
CTCCGGATGGATGGACAAACACTAGTCAATCTTGAGATTTTCAGTAATAATGCTGATGGT
GGCTCATCAGGCAAGTGTACTCTATACAAATATCTTGATAACTGTGTAACATCATCTGGT
AAGCGGCTTTTGCGGAACTGGATCTGTCATCCACTGAAAGATGTTCAGGGAATCAATAAT
AGGCTTAATGTAGTGGAGCATCTAATGACCAATACAGAAACTATGTCGTTCATTGCTCAA
TGTCTTCGCAAGCTTCCAGACTTGGAAAGGTTACTTGGACAGGTCAAGGCTAGTGTTCAG
TCATCAGCTTTACTATTGCTGCCTTTTTTTGGCAAAAAATTATTGAAACAGCGGGTAAAA
GTGTTTGGGTTGCTTGTTAAAGGTTTGCGCGTTGCAATAGACTTGCTAGTGCAGCTACAG
AAGGAAGGGCACATAATGCCATCATTATCAGAAGTCTTAAAACTTCCAATGTTAAGTGGT
AGTAGTGGGGTTGATAAACTCCTTACTCAGTTCGAAGCAGCAATAGATAGTGACTTCCCC
AATTATGAGAACCATGATGTAACAGATTCAGATGCCGAAATACTCTCTATTCTGATTGAG
TTATTTATTGAGAAAACTACTCAGTGGCTTCAAGTCATTCATGCTATTAACCACATCGAT
GTACTAAGGTCTTTTGCAGTCATTGCAAACTTTTCATGTGGGGCTATGTCTAGACCTGTT
ATTTTGCCTCATTCAGAACCAGCAACTTTGTCTGGAGAGACTAGAGGACCTCTACTTAAA
ATCAGAGGTCTATGGCATCCATTTGCTATTGGGGAGAATGGAGGACTGCCTGTCCCAAAT
GACATACACCTTGGTGAGGATACAGATGGCAATCATCCACGCACTTTGCTGTTGACTGGA
CCAAATATGGGTGGAAAATCAACCCTTCTGCGTGCCACCTGTCTTGCTGTTATACTGGCC
CAGCTGGGCTCTTATGTGCCTTGTAAGATGTGTATACTCTCCCTTGTGGATGTTGTCTTC
ACAAGGCTTGGTGCCACTGATCGAATCATGACTGGAGAGAGTACTTTCTTTATCGAGTGC
ACTGAAACAGCATCAGTTCTTCGAAATGCCACTCAAGATTCTCTTGTTCTGCTTGATGAA
CTGGGTCGAGGAACAAGCACCTTTGATGGATATGCCATTGCATATGCTGTATTCCGCCAT
CTTGTTGAAAAGGTCAACTGCCGGTTGCTATTTGCTACACACTACCACCCACTGACAAAG
GAATTTGCTTCTCATCCTCATGTCACACTACAACACATGGCTTGCACTTTCAACCTGAAG
GGTGAAAAGTCTTCTGGAGGTGAACAGGAGTTAGTTTTTCTTTACCAGCTTACATCCGGA
GCATGCCCAGAGAGTTATGGATTACAAGTGGCACTCATGGCTGGGGTCCCAAAAGAGGTG
GTTGAAGCAGCTTCAACAGCTGGACGAATGATGAAACAGTCGATCGGAGAAAGTTTCAGG
ACAAGTGAACAGAGATCAGAGTTCTCAACTCTCCATGAAGAGTGGCTGAAGGCCCTATTG
ACCGTTTCAAGGCTTGGAGAACATAATTTTGATGATGATGCCTGGGATACATTGTTTTGC
CTGTGGCATGAGATGAAGAGCTCATGCCAATCCACTAACTCAAGAAAGGCACTAAATTCA
CAGATTGCACCTTAG

Peptide Sequence

PEP ID

VIT_11s0016g04090.t01
PEP Infomation

pep chromosome:12X:11:3341776:3358113:1 gene:VIT_11s0016g04090 transcript:VIT_11s0016g04090.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQRQKSILSFFQKPSPEDQKCGGSSAADTSAGRSVSQFPAKQRNQNFAVGDQPTFQIPKH
SSMEITGTDTPPEKVPRQMIPASFTANDDRKAASSSSSLFSSIMHKFVKVDERESSCERK
EMHSGSSNTCSTSVNSDCEVLPKEGNVFHSDAKESGFNSTKQVNQVCSLHSESGDDDIIG
PETPGMRPFVPRLKRIQEDNFENKNECSLLDSSKRLKLLQNSTTGNKNYGEVSDTTSKFE
WLDPSRKRDANRRRPGDALYDKRTLYIPPDALQKMSASQKQYWSIKCQYMDVVLFFKVGK
FYELYELDAEIGHKELDWKMTFSGVGKCRQVGISESGIDEAVQKLIARGYKVGRMEQLET
SEQAKARGSTSVIQRKLVHVVTPSTACDGNIGPDAVHLLSVKEGNNILENGSVIYGFAFV
DCAALKFWIGSISDDASCAALGALLMQVSPKEVIYENQELSKEAQKALKKYSLSGFTALK
LTPLPLCTDFVDASKVRNLIHLKGYFKGSDNSWDHALDGVMHHDLALCALGGLLGHLSRL
KLDDTLRNGDILPYQVYSGCLRMDGQTLVNLEIFSNNADGGSSGKCTLYKYLDNCVTSSG
KRLLRNWICHPLKDVQGINNRLNVVEHLMTNTETMSFIAQCLRKLPDLERLLGQVKASVQ
SSALLLLPFFGKKLLKQRVKVFGLLVKGLRVAIDLLVQLQKEGHIMPSLSEVLKLPMLSG
SSGVDKLLTQFEAAIDSDFPNYENHDVTDSDAEILSILIELFIEKTTQWLQVIHAINHID
VLRSFAVIANFSCGAMSRPVILPHSEPATLSGETRGPLLKIRGLWHPFAIGENGGLPVPN
DIHLGEDTDGNHPRTLLLTGPNMGGKSTLLRATCLAVILAQLGSYVPCKMCILSLVDVVF
TRLGATDRIMTGESTFFIECTETASVLRNATQDSLVLLDELGRGTSTFDGYAIAYAVFRH
LVEKVNCRLLFATHYHPLTKEFASHPHVTLQHMACTFNLKGEKSSGGEQELVFLYQLTSG
ACPESYGLQVALMAGVPKEVVEAASTAGRMMKQSIGESFRTSEQRSEFSTLHEEWLKALL
TVSRLGEHNFDDDAWDTLFCLWHEMKSSCQSTNSRKALNSQIAP

Transcript Sequence

Transcript ID

VIT_11s0016g04090.t01
Transcript Infomation

cdna chromosome:12X:11:3341776:3358113:1 gene:VIT_11s0016g04090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GATGCAACGTCAGAAATCTATATTATCTTTTTTTCAAAAACCCTCGCCGGAGGACCAAAA
GTGCGGAGGTTCATCAGCCGCCGACACATCCGCGGGCCGGAGCGTTTCTCAGTTTCCGGC
GAAGCAACGGAACCAAAACTTCGCTGTTGGTGATCAACCTACATTTCAGATCCCAAAGCA
CTCGTCTATGGAAATCACAGGTACGGACACTCCGCCGGAGAAGGTGCCACGTCAGATGAT
ACCGGCCAGCTTCACCGCAAATGACGACAGAAAAGCTGCTTCTTCTTCTTCTTCTTTGTT
CTCAAGTATCATGCATAAGTTTGTGAAAGTTGATGAAAGAGAAAGCTCTTGCGAGAGGAA
AGAAATGCACAGTGGATCCTCTAATACTTGCTCGACATCTGTTAACAGTGACTGTGAAGT
GCTCCCTAAAGAAGGAAATGTGTTTCACAGTGATGCAAAGGAAAGTGGTTTTAATTCTAC
CAAGCAAGTTAATCAAGTGTGTTCACTTCATAGTGAAAGTGGTGATGATGATATCATTGG
GCCTGAGACACCTGGTATGCGACCTTTTGTCCCCCGTTTGAAACGAATTCAAGAAGATAA
CTTTGAGAATAAGAATGAGTGTTCCTTGCTGGATTCTAGCAAAAGACTGAAGCTTCTTCA
GAATTCAACAACTGGAAACAAAAACTATGGGGAAGTATCTGATACAACTAGCAAGTTTGA
ATGGCTTGATCCTTCCCGAAAAAGGGATGCTAATAGGAGGAGGCCTGGTGATGCTCTTTA
TGATAAAAGGACACTTTATATACCGCCTGATGCTTTGCAGAAAATGTCAGCAAGTCAGAA
ACAATATTGGAGTATCAAATGCCAATATATGGATGTTGTTCTCTTCTTCAAAGTGGGAAA
ATTCTATGAGCTTTATGAACTAGATGCTGAAATTGGCCATAAGGAGCTTGATTGGAAAAT
GACATTTAGTGGTGTGGGGAAATGTCGACAGGTTGGTATTTCTGAGAGTGGGATTGATGA
GGCTGTGCAGAAGTTGATTGCTCGTGGATATAAAGTTGGACGAATGGAGCAGTTGGAGAC
ATCTGAACAAGCAAAAGCCAGAGGTTCAACTTCAGTAATTCAAAGAAAACTAGTTCATGT
AGTCACACCATCAACTGCATGCGATGGCAACATTGGGCCTGATGCTGTTCATCTTCTTTC
TGTAAAGGAGGGTAACAACATATTGGAGAATGGTTCAGTTATATATGGGTTTGCTTTTGT
TGATTGTGCGGCCTTAAAATTTTGGATTGGATCCATAAGTGACGATGCTTCTTGTGCTGC
TTTGGGGGCTTTGTTGATGCAAGTGTCACCTAAGGAAGTCATATATGAAAACCAAGAGCT
GTCCAAAGAAGCTCAGAAAGCACTCAAGAAGTATTCATTATCAGGCTTCACTGCTTTGAA
GTTGACTCCTCTTCCGCTGTGCACTGATTTTGTGGATGCTTCAAAAGTAAGAAATCTGAT
TCATTTGAAGGGGTACTTTAAAGGCTCTGATAATTCATGGGATCATGCACTTGATGGTGT
CATGCACCATGATCTTGCTTTATGCGCTCTTGGTGGACTTCTTGGTCATTTGTCCAGGTT
GAAGTTGGATGATACTTTACGTAATGGAGATATTTTACCATACCAAGTCTATAGCGGTTG
CCTCCGGATGGATGGACAAACACTAGTCAATCTTGAGATTTTCAGTAATAATGCTGATGG
TGGCTCATCAGGCAAGTGTACTCTATACAAATATCTTGATAACTGTGTAACATCATCTGG
TAAGCGGCTTTTGCGGAACTGGATCTGTCATCCACTGAAAGATGTTCAGGGAATCAATAA
TAGGCTTAATGTAGTGGAGCATCTAATGACCAATACAGAAACTATGTCGTTCATTGCTCA
ATGTCTTCGCAAGCTTCCAGACTTGGAAAGGTTACTTGGACAGGTCAAGGCTAGTGTTCA
GTCATCAGCTTTACTATTGCTGCCTTTTTTTGGCAAAAAATTATTGAAACAGCGGGTAAA
AGTGTTTGGGTTGCTTGTTAAAGGTTTGCGCGTTGCAATAGACTTGCTAGTGCAGCTACA
GAAGGAAGGGCACATAATGCCATCATTATCAGAAGTCTTAAAACTTCCAATGTTAAGTGG
TAGTAGTGGGGTTGATAAACTCCTTACTCAGTTCGAAGCAGCAATAGATAGTGACTTCCC
CAATTATGAGAACCATGATGTAACAGATTCAGATGCCGAAATACTCTCTATTCTGATTGA
GTTATTTATTGAGAAAACTACTCAGTGGCTTCAAGTCATTCATGCTATTAACCACATCGA
TGTACTAAGGTCTTTTGCAGTCATTGCAAACTTTTCATGTGGGGCTATGTCTAGACCTGT
TATTTTGCCTCATTCAGAACCAGCAACTTTGTCTGGAGAGACTAGAGGACCTCTACTTAA
AATCAGAGGTCTATGGCATCCATTTGCTATTGGGGAGAATGGAGGACTGCCTGTCCCAAA
TGACATACACCTTGGTGAGGATACAGATGGCAATCATCCACGCACTTTGCTGTTGACTGG
ACCAAATATGGGTGGAAAATCAACCCTTCTGCGTGCCACCTGTCTTGCTGTTATACTGGC
CCAGCTGGGCTCTTATGTGCCTTGTAAGATGTGTATACTCTCCCTTGTGGATGTTGTCTT
CACAAGGCTTGGTGCCACTGATCGAATCATGACTGGAGAGAGTACTTTCTTTATCGAGTG
CACTGAAACAGCATCAGTTCTTCGAAATGCCACTCAAGATTCTCTTGTTCTGCTTGATGA
ACTGGGTCGAGGAACAAGCACCTTTGATGGATATGCCATTGCATATGCTGTATTCCGCCA
TCTTGTTGAAAAGGTCAACTGCCGGTTGCTATTTGCTACACACTACCACCCACTGACAAA
GGAATTTGCTTCTCATCCTCATGTCACACTACAACACATGGCTTGCACTTTCAACCTGAA
GGGTGAAAAGTCTTCTGGAGGTGAACAGGAGTTAGTTTTTCTTTACCAGCTTACATCCGG
AGCATGCCCAGAGAGTTATGGATTACAAGTGGCACTCATGGCTGGGGTCCCAAAAGAGGT
GGTTGAAGCAGCTTCAACAGCTGGACGAATGATGAAACAGTCGATCGGAGAAAGTTTCAG
GACAAGTGAACAGAGATCAGAGTTCTCAACTCTCCATGAAGAGTGGCTGAAGGCCCTATT
GACCGTTTCAAGGCTTGGAGAACATAATTTTGATGATGATGCCTGGGATACATTGTTTTG
CCTGTGGCATGAGATGAAGAGCTCATGCCAATCCACTAACTCAAGAAAGGCACTAAATTC
ACAGATTGCACCTTAGAAATCCTGAAGCAGTCAATTTTGAAATGATTTGGCAGTTCAGAT
CCATGACTTTGTACGTGCATAATTTAGATATTTGGTTGTAAATTGGGGAAAAGAACTGCA
CTGTAAATTGTTTCCTGATGCTAATAGCCTAAGAGCTTTC