Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_11s0016g04070.t01
CDS Infomation	cds chromosome:12X:11:3329915:3336836:1 gene:VIT_11s0016g04070 gene_biotype:protein_coding transcript_biotype:protein_coding description:FRIGIDA-like protein [Source:UniProtKB/TrEMBL;Acc:F6HH27]
Sequence	ATGGCTATCGACACCGACCGAGTTCAAAAACTATTCGACTCTCTGGAAGCCCAAAAGACG ATTCTATCCACATGCACCCAACTCTACAAAACTCTCTCCAATCATTTCTCTTCCCTCCAG CACTCCCTTTCCCAGAAATCCAGTTCCCTTGACTCCAAATTCCAAGCCCTAGAATCTGAC TCCAAGAAAACCCTCGAATCCCTTGACCAGCGCGAAAATTCTATACCCGAGCGCGAGTCA TCTGCTGCCGCCCGCATCGAGGAGCAGAGGGAGGCGGCGCTCTCCGAGTTCGAGAAGGCC GTCCCTGAAAATGCTGAATTATCGGAGTGTTTGAAATCGTACTGCCGCAAGATGGATTCT TCAGGTTTGTTGAGGTTTATGGTGTCGAAGCGGAAGGAGTCGATGTCGTTGAGATCGGAG ATTGTGTCCGCGATGGAGGAGTCGGTGGACTCGGCACGGTTGGTGTTAGATGCAGTGGAA GAATTCGTTTCACAGAAATCGGGGAAAGTTGGGATTCCGGACAAGCGTTGGGCATGCGGA ATGCTGATGCAGGCATTGTTTCCTGCAGCGGAGTTGGGTGGGAAGACGGTGCCAAAGCCT GCATTTGCCAGGAGCGTGGTGGAGAGGGCGGCCAGAGTTGCTGAGTTGTGGAAGGGAAAG ATGGGTGATGGAGGGGAAGGGAGCATGATTGGTCCAACAGAGGCAGCTATGTTTATGCAA ATGGTAGCTGGGTTCGGGTTGAAGCCAAAGTTTGATGAGGAGTTTTTAAGGAAACAGGTG CTGGAGTTTGCCTCAAGGAGGGATATGCCGAAGCTGGCCATTGCATTAGGATTTGGGGAG AAAATGGGAGATATAATTGATGAATTGGTGAAAAGTGGTAAAGAGATTGAGGCAGTGTAT TTTGCTTCTGAGTCTGGGTTGACTGAACGGTTTTCTCCTGTCTCTCTGCTCAAGTCTTAT CTCCATAACTCAAGGAAAAATGCTACAACTATTTTGAAGAATGGCAACTATAGCACTGCA GCAACGGAAGAGTCCGGGAACGTAGAGTTAAATTCGATAAAAACCATAATCAAATGTGTG GAAGACCACAAGCTCGAATCAGAGTTCTCCATTGATAGCTTAAGGAAACGGGCAACCCAG CTAGAGAAAGCCAAGGTAGAGAGAAAGAAGAGTTCAGCAGGTGCAAGCAAGCCTCCCAAT AAGCGAGCCCATGGTGGTGGCAGTGGGAGTGGCAGTGGCCGGGGTAGTGGACCTTCAGCT TTCCGTCCAGCCAAAGCACCTAAATTTTCAAACTCCACTTACCCGTCTTTCGGCAGAAGG AACCCAGCTCCTCCTCCCCAGCACAGCCCAGCGGGGAGATATTCTGGCCCATTCAGCTAC CCTGCTCAAGGTGTCTATGATGGTCCCACCCCACCCCCTTATGCATCTACCTACGGTGGG CCTCACCCCCAAACGCCCACCATTCCTCAACAGCACTACTCACTCTCTGTGGATGATATG GGAGCTGGTGGGATGAGGGCCAGTGGCTCGTATGGAGGACAGACTAGCTACAACGCATAT GACTACGCCGCTGCTGCTCCCCCCACTTACCATACTCAATAG

Peptide Sequence

PEP ID	VIT_11s0016g04070.t01
PEP Infomation	pep chromosome:12X:11:3329915:3336836:1 gene:VIT_11s0016g04070 transcript:VIT_11s0016g04070.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:FRIGIDA-like protein [Source:UniProtKB/TrEMBL;Acc:F6HH27]
Sequence	MAIDTDRVQKLFDSLEAQKTILSTCTQLYKTLSNHFSSLQHSLSQKSSSLDSKFQALESD SKKTLESLDQRENSIPERESSAAARIEEQREAALSEFEKAVPENAELSECLKSYCRKMDS SGLLRFMVSKRKESMSLRSEIVSAMEESVDSARLVLDAVEEFVSQKSGKVGIPDKRWACG MLMQALFPAAELGGKTVPKPAFARSVVERAARVAELWKGKMGDGGEGSMIGPTEAAMFMQ MVAGFGLKPKFDEEFLRKQVLEFASRRDMPKLAIALGFGEKMGDIIDELVKSGKEIEAVY FASESGLTERFSPVSLLKSYLHNSRKNATTILKNGNYSTAATEESGNVELNSIKTIIKCV EDHKLESEFSIDSLRKRATQLEKAKVERKKSSAGASKPPNKRAHGGGSGSGSGRGSGPSA FRPAKAPKFSNSTYPSFGRRNPAPPPQHSPAGRYSGPFSYPAQGVYDGPTPPPYASTYGG PHPQTPTIPQQHYSLSVDDMGAGGMRASGSYGGQTSYNAYDYAAAAPPTYHTQ

Transcript Sequence

Transcript ID	VIT_11s0016g04070.t01
Transcript Infomation	cdna chromosome:12X:11:3329915:3336836:1 gene:VIT_11s0016g04070 gene_biotype:protein_coding transcript_biotype:protein_coding description:FRIGIDA-like protein [Source:UniProtKB/TrEMBL;Acc:F6HH27]
Sequence	ACTACTCTTGTTCTGCTCGCGATTAGGGTTTAGGGTTTTTTGCTTCAGAAAATCTTCGCA CCAGCAGCAAGCTCAAATTTCTCCCAACTCTTCGCCAATGGCTATCGACACCGACCGAGT TCAAAAACTATTCGACTCTCTGGAAGCCCAAAAGACGATTCTATCCACATGCACCCAACT CTACAAAACTCTCTCCAATCATTTCTCTTCCCTCCAGCACTCCCTTTCCCAGAAATCCAG TTCCCTTGACTCCAAATTCCAAGCCCTAGAATCTGACTCCAAGAAAACCCTCGAATCCCT TGACCAGCGCGAAAATTCTATACCCGAGCGCGAGTCATCTGCTGCCGCCCGCATCGAGGA GCAGAGGGAGGCGGCGCTCTCCGAGTTCGAGAAGGCCGTCCCTGAAAATGCTGAATTATC GGAGTGTTTGAAATCGTACTGCCGCAAGATGGATTCTTCAGGTTTGTTGAGGTTTATGGT GTCGAAGCGGAAGGAGTCGATGTCGTTGAGATCGGAGATTGTGTCCGCGATGGAGGAGTC GGTGGACTCGGCACGGTTGGTGTTAGATGCAGTGGAAGAATTCGTTTCACAGAAATCGGG GAAAGTTGGGATTCCGGACAAGCGTTGGGCATGCGGAATGCTGATGCAGGCATTGTTTCC TGCAGCGGAGTTGGGTGGGAAGACGGTGCCAAAGCCTGCATTTGCCAGGAGCGTGGTGGA GAGGGCGGCCAGAGTTGCTGAGTTGTGGAAGGGAAAGATGGGTGATGGAGGGGAAGGGAG CATGATTGGTCCAACAGAGGCAGCTATGTTTATGCAAATGGTAGCTGGGTTCGGGTTGAA GCCAAAGTTTGATGAGGAGTTTTTAAGGAAACAGGTGCTGGAGTTTGCCTCAAGGAGGGA TATGCCGAAGCTGGCCATTGCATTAGGATTTGGGGAGAAAATGGGAGATATAATTGATGA ATTGGTGAAAAGTGGTAAAGAGATTGAGGCAGTGTATTTTGCTTCTGAGTCTGGGTTGAC TGAACGGTTTTCTCCTGTCTCTCTGCTCAAGTCTTATCTCCATAACTCAAGGAAAAATGC TACAACTATTTTGAAGAATGGCAACTATAGCACTGCAGCAACGGAAGAGTCCGGGAACGT AGAGTTAAATTCGATAAAAACCATAATCAAATGTGTGGAAGACCACAAGCTCGAATCAGA GTTCTCCATTGATAGCTTAAGGAAACGGGCAACCCAGCTAGAGAAAGCCAAGGTAGAGAG AAAGAAGAGTTCAGCAGGTGCAAGCAAGCCTCCCAATAAGCGAGCCCATGGTGGTGGCAG TGGGAGTGGCAGTGGCCGGGGTAGTGGACCTTCAGCTTTCCGTCCAGCCAAAGCACCTAA ATTTTCAAACTCCACTTACCCGTCTTTCGGCAGAAGGAACCCAGCTCCTCCTCCCCAGCA CAGCCCAGCGGGGAGATATTCTGGCCCATTCAGCTACCCTGCTCAAGGTGTCTATGATGG TCCCACCCCACCCCCTTATGCATCTACCTACGGTGGGCCTCACCCCCAAACGCCCACCAT TCCTCAACAGCACTACTCACTCTCTGTGGATGATATGGGAGCTGGTGGGATGAGGGCCAG TGGCTCGTATGGAGGACAGACTAGCTACAACGCATATGACTACGCCGCTGCTGCTCCCCC CACTTACCATACTCAATAGTCTGCAAGTTAAAACACCAGAAAATTTATTAGAGGATTGTA TATTTTTGCTGTCGAGGTCCTTTTTTATCATGGAGCCCTGTTTTTGTCGTTGGCCTTTAC TTTTGATACTTTTGACCTAGAGCTAAATCTTATTCATAGGAGAAGCCGAATTCTGGATCC TCAAAT