Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g04060.t01
CDS Infomation

cds chromosome:12X:11:3306255:3323305:1 gene:VIT_11s0016g04060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCAGATTTGAGAAGTGGAGTTCGCCGATCAAAGAGAATCAACGATATCCAAGAAAAT
GCTGCCGCTTTAGTTCCTGCTACCCGGCGTGGTGCTGGAAGAGGTGATGACTCGAAAGCT
CAAGCCATAAAATCACCTTCACCAAAGCCATATAATCCAGCATTTTTTTATCCAAGGCCA
AGGCCAGCTGGAAGAGGTAGAGGGGCTAGAGCAATGAATCAAGATAAGAATGGCAAGCTT
TTTGGTACTGGAGTTGGTGGCCGGGGGCGTGTAGGCTTGGATTTGGCTGCTAGAGAGGTG
GTCACCATTCCAGATGAAGTGGTTGCGGAGAAGGGTGCAGAAAAGTTGGCTGCTGTGGAG
GAGGAAGGAAGCGCAAGTCCACTTCCTGAGAAGGTACAGATTTCCAATTCCCCTATGTAC
AAGCTAGACAGAAAGCTGGGTAAAGGGGGTTTTGGGCAAGTTTATGTTGGAAGAAGGGTA
ACTGGTGGCACAGGGCGCACTGGACCTGATGCTTTTGAGGTTGCTCTAAAGCTTGAGCAT
CGGAATGGTAAAGGCTGCAGTTATGGCCCACCTTATGAGTGGCAAGTCTACAGCACTCTT
AATGGTTGTTATGGACTTCCCTTGGTCCATTATAAAGGTCGCCAAGGAGACTACTATATC
CTTGTCATGGACATGCTAGGACCGAGTTTATGGGATGTATGGAACTCTAACAGCCAGATG
CTGTCTGAGGAGATGGTTTCCTGTATAGCTGTTGAGGCTATATCAATATTAGAGCAGCTT
CATTTAAGAGGTTTTGTGCATGGAGACGTAAAGCCAGAAAACTTTTTGCTTGGTCTGCCT
GGATCACCTAATGAAAAGAAGTTGTATTTAATTGATCTTGGTTTAGCTTCAAGATGGAGG
GAAGCGTCCTCTGGTCATCATGTGGATTATGACCAAAAGCCCGATGTTTTCAGGGGAACT
GTACGTTATGCAAGCGTACATGCTCATTTGGGAAGGACCGGCAGCCGAAGGGATGACCTT
GAATCATTAGCTTATACGCTAATTTTCCTCCTCCGAGGAAAGCTTCCCTGGCAAGGTTTT
ATTGGGGAGAATAAAGGATTTCTTGTTTGTAAGAAGAAGATGGCAACTTCTCCTGAGATG
CTTTGTTGCTTATGTCCTCCCCCTTTTCAACAGTTTCTTGAGATGGTGACCAACATGAGA
TTTGATGAAGAACCCAATTACATAAAGCTGATTTCCCTTTTTGATAACAGCATTGGTTCC
ATTGCATCTTTGCGGCCTATCAGAATAGATGGTGCTTTAAAGGTGGGTCAAAAAAGGGCA
AGGCTTTCTGAGCAAGAAGATGGTGGTCAGCCTAAGAAGAAAGTTCGGCTAGGTTCTCCA
GCTATGCAATGGATATCAGTTTATAACTCCAGAGCGTCGATGAAGCAGAGATATCACTAC
AATGTAATGGATTCAAGGCTTCATCAGCATGTGGAGAAAGGAAGGGAAGATGGACTGTAT
ATTAGCTGTGTAGCTTCGTCAACAAATTTATGGGCCATCATTATGGATGCAGGAACGGGG
TTCACATCCCAGGTTTATGAACTCTCAACCATTTTCTTACACAAGGAGTGGATAATGGAA
CAGTGGGATAAGAACTTCTATATCACTTCCGTTGCTGGTGCAAGCAATGGCAATGCTTTG
GTGGTAATGTCAAAGGGGACCCCTTATAATCAACAATCATATAAAGTGAGCGATGTATTT
CCTTTCAAATGGATAAATAAGAAGTGGAAAGAAGGCTTTTTTGTTACGTCCATGACCACT
GCAGGCAGCAGATGGGGCATTGTCATGTCCCGAAATGCAGGTTTTTCTAATCAGGTTGTT
GAGCTCGATTTCCTCTATCCAAGTGAAGGGATCCACAGAAGATGGGAGAGTGGATATCGA
ATTACCTCAACCGCTGCAACAGCAGATCAAGCTGCATTCATACTCAGTACATCCAAGAGG
AGAACACAAGATGTGACGCAAGAAACTCTCCGGACATCTGCTTTTCCTTGCACCCATGTT
AAGGATAAATGGTCAAAGAATCTGTATATTGCATCGATCTGCTATGGGAGAACTGTCTCT
TAA

Peptide Sequence

PEP ID

VIT_11s0016g04060.t01
PEP Infomation

pep chromosome:12X:11:3306255:3323305:1 gene:VIT_11s0016g04060 transcript:VIT_11s0016g04060.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPDLRSGVRRSKRINDIQENAAALVPATRRGAGRGDDSKAQAIKSPSPKPYNPAFFYPRP
RPAGRGRGARAMNQDKNGKLFGTGVGGRGRVGLDLAAREVVTIPDEVVAEKGAEKLAAVE
EEGSASPLPEKVQISNSPMYKLDRKLGKGGFGQVYVGRRVTGGTGRTGPDAFEVALKLEH
RNGKGCSYGPPYEWQVYSTLNGCYGLPLVHYKGRQGDYYILVMDMLGPSLWDVWNSNSQM
LSEEMVSCIAVEAISILEQLHLRGFVHGDVKPENFLLGLPGSPNEKKLYLIDLGLASRWR
EASSGHHVDYDQKPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGKLPWQGF
IGENKGFLVCKKKMATSPEMLCCLCPPPFQQFLEMVTNMRFDEEPNYIKLISLFDNSIGS
IASLRPIRIDGALKVGQKRARLSEQEDGGQPKKKVRLGSPAMQWISVYNSRASMKQRYHY
NVMDSRLHQHVEKGREDGLYISCVASSTNLWAIIMDAGTGFTSQVYELSTIFLHKEWIME
QWDKNFYITSVAGASNGNALVVMSKGTPYNQQSYKVSDVFPFKWINKKWKEGFFVTSMTT
AGSRWGIVMSRNAGFSNQVVELDFLYPSEGIHRRWESGYRITSTAATADQAAFILSTSKR
RTQDVTQETLRTSAFPCTHVKDKWSKNLYIASICYGRTVS

Transcript Sequence

Transcript ID

VIT_11s0016g04060.t01
Transcript Infomation

cdna chromosome:12X:11:3306255:3323305:1 gene:VIT_11s0016g04060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAGTTAAAAGGGGGTTTCTTTTGCATGGGAAAAGGATGCCAGATTTGAGAAGTGGAGTTC
GCCGATCAAAGAGAATCAACGATATCCAAGAAAATGCTGCCGCTTTAGTTCCTGCTACCC
GGCGTGGTGCTGGAAGAGGTGATGACTCGAAAGCTCAAGCCATAAAATCACCTTCACCAA
AGCCATATAATCCAGCATTTTTTTATCCAAGGCCAAGGCCAGCTGGAAGAGGTAGAGGGG
CTAGAGCAATGAATCAAGATAAGAATGGCAAGCTTTTTGGTACTGGAGTTGGTGGCCGGG
GGCGTGTAGGCTTGGATTTGGCTGCTAGAGAGGTGGTCACCATTCCAGATGAAGTGGTTG
CGGAGAAGGGTGCAGAAAAGTTGGCTGCTGTGGAGGAGGAAGGAAGCGCAAGTCCACTTC
CTGAGAAGGTACAGATTTCCAATTCCCCTATGTACAAGCTAGACAGAAAGCTGGGTAAAG
GGGGTTTTGGGCAAGTTTATGTTGGAAGAAGGGTAACTGGTGGCACAGGGCGCACTGGAC
CTGATGCTTTTGAGGTTGCTCTAAAGCTTGAGCATCGGAATGGTAAAGGCTGCAGTTATG
GCCCACCTTATGAGTGGCAAGTCTACAGCACTCTTAATGGTTGTTATGGACTTCCCTTGG
TCCATTATAAAGGTCGCCAAGGAGACTACTATATCCTTGTCATGGACATGCTAGGACCGA
GTTTATGGGATGTATGGAACTCTAACAGCCAGATGCTGTCTGAGGAGATGGTTTCCTGTA
TAGCTGTTGAGGCTATATCAATATTAGAGCAGCTTCATTTAAGAGGTTTTGTGCATGGAG
ACGTAAAGCCAGAAAACTTTTTGCTTGGTCTGCCTGGATCACCTAATGAAAAGAAGTTGT
ATTTAATTGATCTTGGTTTAGCTTCAAGATGGAGGGAAGCGTCCTCTGGTCATCATGTGG
ATTATGACCAAAAGCCCGATGTTTTCAGGGGAACTGTACGTTATGCAAGCGTACATGCTC
ATTTGGGAAGGACCGGCAGCCGAAGGGATGACCTTGAATCATTAGCTTATACGCTAATTT
TCCTCCTCCGAGGAAAGCTTCCCTGGCAAGGTTTTATTGGGGAGAATAAAGGATTTCTTG
TTTGTAAGAAGAAGATGGCAACTTCTCCTGAGATGCTTTGTTGCTTATGTCCTCCCCCTT
TTCAACAGTTTCTTGAGATGGTGACCAACATGAGATTTGATGAAGAACCCAATTACATAA
AGCTGATTTCCCTTTTTGATAACAGCATTGGTTCCATTGCATCTTTGCGGCCTATCAGAA
TAGATGGTGCTTTAAAGGTGGGTCAAAAAAGGGCAAGGCTTTCTGAGCAAGAAGATGGTG
GTCAGCCTAAGAAGAAAGTTCGGCTAGGTTCTCCAGCTATGCAATGGATATCAGTTTATA
ACTCCAGAGCGTCGATGAAGCAGAGATATCACTACAATGTAATGGATTCAAGGCTTCATC
AGCATGTGGAGAAAGGAAGGGAAGATGGACTGTATATTAGCTGTGTAGCTTCGTCAACAA
ATTTATGGGCCATCATTATGGATGCAGGAACGGGGTTCACATCCCAGGTTTATGAACTCT
CAACCATTTTCTTACACAAGGAGTGGATAATGGAACAGTGGGATAAGAACTTCTATATCA
CTTCCGTTGCTGGTGCAAGCAATGGCAATGCTTTGGTGGTAATGTCAAAGGGGACCCCTT
ATAATCAACAATCATATAAAGTGAGCGATGTATTTCCTTTCAAATGGATAAATAAGAAGT
GGAAAGAAGGCTTTTTTGTTACGTCCATGACCACTGCAGGCAGCAGATGGGGCATTGTCA
TGTCCCGAAATGCAGGTTTTTCTAATCAGGTTGTTGAGCTCGATTTCCTCTATCCAAGTG
AAGGGATCCACAGAAGATGGGAGAGTGGATATCGAATTACCTCAACCGCTGCAACAGCAG
ATCAAGCTGCATTCATACTCAGTACATCCAAGAGGAGAACACAAGATGTGACGCAAGAAA
CTCTCCGGACATCTGCTTTTCCTTGCACCCATGTTAAGGATAAATGGTCAAAGAATCTGT
ATATTGCATCGATCTGCTATGGGAGAACTGTCTCTTAAAGTCTGGAATTTGAAAGAGGAA
ACTCTGGTTGCAGGTTTAGTGGCAGGCAGGTTAGCGGTTTGCACAGAAGAAGTTGCCAGC
CCCTCTGGAGAAAATGTGGCGGAAGTCTTTCAAGTATGTAAAGTTGGTCTTCTGGACATG
TGGATAATCATATGGCGCCCCAACATCTTTCTTAGAAGAATGCTTTCCTAGAGGGAGTTC
AAAGCCTAGATGTTTGTACAATTCTTGGACACAATGTCTCTGGTATGTTTCAATTTTGGC
TTCAGAGGGTTGGGATAGCAGTCTTGGAAGATGGCCTCTTGGTGGGAACTGAAATTTAGG
GGTGTCTCCTGTTGGGGGAGTTACAAAGAAGTTAAACCCCAGAATGTTGTTATGTTGACA
TAAACGGACCAGCTATGTTATAACTTTATTTGAAGAGATTAAAAGAGGAACAAGAAAAAG
AACAATTGGACC