Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g04010.t01
CDS Infomation

cds chromosome:12X:11:3263191:3268784:1 gene:VIT_11s0016g04010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTGGACGGCTTATTAGGTCGAGGATTTACTTCGAAATGTAAATCGTGGATCAAGGGA
ACAAGGACTCGAATCGATGTGATACGGAGGAAGAGGGACGCGACGCAGAAGTTTCTGAAG
AAAGATGTCGCCGATCTGCTTGCTAATGGTCTCGATATCAATGCTTTTGGAAGGGTTGAA
GGACTTTTAAAGGAACTGATGCTCTCATGGTGTTACGATTTTGTTGAGCAATCTTGCGAT
TGTATACTGAAGCATCTTTCAATCATGCAAAAGCAGAGTGAATGCCCTGAGGAATGCAGG
GAGGCTGTGTCATCCCTAATGTTTGCTGCTGCTAGATTTTCTGATTTACCAGAATTGCGT
GACCTCAGGAATATATTTCAAGAGAAATATGGGAATTATGTGGAACATTTTGTGAATAAA
GAGTTTGCTGAGAATTTAACTTCAAAGCCTCCTACAAGGGAGAAGAAAATCCAATTAATG
CAAGATATAGCATCAGAGTTTTCCATTAGGTGGGACTCCAGGACTTTTGAACAGACAATG
TCTAAGCCCTCTGCATCTGTGCCAGAAAAACCTAAGAAAGTTGGGTCTTTCAATGTGATC
GATGATAAACATAAATTACCCAATGGCCAGGACACAGTACTAAAAAGATATAAATCTGAT
ACTTCATCTAGGGAAAGGCATGAAGGTACCAATAAAGGGCAGAAATTGCAGAGTGACAGA
GAGGGCAATCATACCAACAACTTATACCAGCCACTCAATAGCAGGGAAGCCCATGATATT
CCATTTCAAGGCAGGCAAGAACTTACTGCTGATAGACACAAGATGTTTATTGGAAAGGAT
GCTGCCTCTGAAACAATTAGATCAGGTAGTTCATCTCATGGTAAACGACACGAAGGCATT
GATGGTGCGTACAAGCTTCATAATATTGGGGAAAATACTGTCTCTAAAAGAGAGAACCAG
GAGACTTTATCTCATGGAAAATCAAATTCTTCTGCTACCCATGTAGAACGGCTGATTAAG
AGTGATGACAGAGCTGTGCCCTTTGCTGGTAATAAAAACACCGGTCAGCACAATACTGGG
AAATCAATTAGGGAAGTTGAAGAGGTAGAAAAATCCTACTATAACAATGCCATCCCTCCT
CCATATGTGAAACCACCGAAATCTAGCAAACATGGGGCCAACAAAGGATCAAAGCGTGCT
CCCATAGATCCTTCAACACATAACAGAGCTGGTGCCACTAATACAGCAGACGGGATCCAA
ATAAGATCAGATCATCTTGACCATGAGAGGCAGGTTTTTGGATCTGAAAATGGTCATCAT
GACCATGACCGGCAGGTTGCTGGACCTGCAAGGATGAATAACCGTCATGACAAATCTTAT
CAGCATCAAGATGATTTAACTGGTGATCCCATACCAAAAACAAGATCAAGCAGGAGGAGA
CATTCAAGATCACCATCCAGCCACAATGATGTTGGTAATTTTGAAGATTCTGAAGCCCCC
GTGGACCCTTCTATCCATATCAGAGCCAGTGCCAAAAATAGGTCTGAGAGGATCCAAGGA
GGATCAGATCGTTCTGATCATGAGGGGCAATTTGTTGGGCCTGTGGGTCATGGTCATGAG
AAAGATTACTATTATCAAGATGATATAACTGGTGACCCCTTGCGAAGACCTAGATCATTG
AGGAGGAGACGCTCTAAATCTTTGAGTCATGAAGATAGTGACCATATTGAAGGTGCAGGA
GTTGTAAAGAGAAATTCAAGTAGCAGGAGAAGAGAGCACTCAAGACGAGGTATGCAAGTT
GTGCTTGATGATGGACGATATGAGATAGATGAAGAGGAAAGGATAATAGATCGACTGTTG
TTACATTATAGTAAGAAACCAACAGCCTATGAGCCAGGAAAGGTGAGGAAGAAATCTAAA
GCCCATCCTTCACATCACTCGGGTGAATCGCCAGAAAATGAAAGCAAAGAGGGTCCTGGT
GTGAAGTCAGAGATCGTTCCTACCACAGCGAGATCGGTTTCTCTCCCCAGGGAACAAACA
TCTACTTCTGAAGCAACTAAAGTATTTGCTCGCACTAAATCTTTTCAACCGGATATGTTG
AACCAGGCACGGCACGTGCATCCTAAGCTACCAGATTATGATGATTTGGCTGCTCGGTTT
GCAGCCTTGAAAGGGAGGTAA

Peptide Sequence

PEP ID

VIT_11s0016g04010.t01
PEP Infomation

pep chromosome:12X:11:3263191:3268784:1 gene:VIT_11s0016g04010 transcript:VIT_11s0016g04010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLDGLLGRGFTSKCKSWIKGTRTRIDVIRRKRDATQKFLKKDVADLLANGLDINAFGRVE
GLLKELMLSWCYDFVEQSCDCILKHLSIMQKQSECPEECREAVSSLMFAAARFSDLPELR
DLRNIFQEKYGNYVEHFVNKEFAENLTSKPPTREKKIQLMQDIASEFSIRWDSRTFEQTM
SKPSASVPEKPKKVGSFNVIDDKHKLPNGQDTVLKRYKSDTSSRERHEGTNKGQKLQSDR
EGNHTNNLYQPLNSREAHDIPFQGRQELTADRHKMFIGKDAASETIRSGSSSHGKRHEGI
DGAYKLHNIGENTVSKRENQETLSHGKSNSSATHVERLIKSDDRAVPFAGNKNTGQHNTG
KSIREVEEVEKSYYNNAIPPPYVKPPKSSKHGANKGSKRAPIDPSTHNRAGATNTADGIQ
IRSDHLDHERQVFGSENGHHDHDRQVAGPARMNNRHDKSYQHQDDLTGDPIPKTRSSRRR
HSRSPSSHNDVGNFEDSEAPVDPSIHIRASAKNRSERIQGGSDRSDHEGQFVGPVGHGHE
KDYYYQDDITGDPLRRPRSLRRRRSKSLSHEDSDHIEGAGVVKRNSSSRRREHSRRGMQV
VLDDGRYEIDEEERIIDRLLLHYSKKPTAYEPGKVRKKSKAHPSHHSGESPENESKEGPG
VKSEIVPTTARSVSLPREQTSTSEATKVFARTKSFQPDMLNQARHVHPKLPDYDDLAARF
AALKGR

Transcript Sequence

Transcript ID

VIT_11s0016g04010.t01
Transcript Infomation

cdna chromosome:12X:11:3263191:3268784:1 gene:VIT_11s0016g04010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAAGATGTTGGACGGCTTATTAGGTCGAGGATTTACTTCGAAATGTAAATCGTGGATCAA
GGGAACAAGGACTCGAATCGATGTGATACGGAGGAAGAGGGACGCGACGCAGAAGTTTCT
GAAGAAAGATGTCGCCGATCTGCTTGCTAATGGTCTCGATATCAATGCTTTTGGAAGGGT
TGAAGGACTTTTAAAGGAACTGATGCTCTCATGGTGTTACGATTTTGTTGAGCAATCTTG
CGATTGTATACTGAAGCATCTTTCAATCATGCAAAAGCAGAGTGAATGCCCTGAGGAATG
CAGGGAGGCTGTGTCATCCCTAATGTTTGCTGCTGCTAGATTTTCTGATTTACCAGAATT
GCGTGACCTCAGGAATATATTTCAAGAGAAATATGGGAATTATGTGGAACATTTTGTGAA
TAAAGAGTTTGCTGAGAATTTAACTTCAAAGCCTCCTACAAGGGAGAAGAAAATCCAATT
AATGCAAGATATAGCATCAGAGTTTTCCATTAGGTGGGACTCCAGGACTTTTGAACAGAC
AATGTCTAAGCCCTCTGCATCTGTGCCAGAAAAACCTAAGAAAGTTGGGTCTTTCAATGT
GATCGATGATAAACATAAATTACCCAATGGCCAGGACACAGTACTAAAAAGATATAAATC
TGATACTTCATCTAGGGAAAGGCATGAAGGTACCAATAAAGGGCAGAAATTGCAGAGTGA
CAGAGAGGGCAATCATACCAACAACTTATACCAGCCACTCAATAGCAGGGAAGCCCATGA
TATTCCATTTCAAGGCAGGCAAGAACTTACTGCTGATAGACACAAGATGTTTATTGGAAA
GGATGCTGCCTCTGAAACAATTAGATCAGGTAGTTCATCTCATGGTAAACGACACGAAGG
CATTGATGGTGCGTACAAGCTTCATAATATTGGGGAAAATACTGTCTCTAAAAGAGAGAA
CCAGGAGACTTTATCTCATGGAAAATCAAATTCTTCTGCTACCCATGTAGAACGGCTGAT
TAAGAGTGATGACAGAGCTGTGCCCTTTGCTGGTAATAAAAACACCGGTCAGCACAATAC
TGGGAAATCAATTAGGGAAGTTGAAGAGGTAGAAAAATCCTACTATAACAATGCCATCCC
TCCTCCATATGTGAAACCACCGAAATCTAGCAAACATGGGGCCAACAAAGGATCAAAGCG
TGCTCCCATAGATCCTTCAACACATAACAGAGCTGGTGCCACTAATACAGCAGACGGGAT
CCAAATAAGATCAGATCATCTTGACCATGAGAGGCAGGTTTTTGGATCTGAAAATGGTCA
TCATGACCATGACCGGCAGGTTGCTGGACCTGCAAGGATGAATAACCGTCATGACAAATC
TTATCAGCATCAAGATGATTTAACTGGTGATCCCATACCAAAAACAAGATCAAGCAGGAG
GAGACATTCAAGATCACCATCCAGCCACAATGATGTTGGTAATTTTGAAGATTCTGAAGC
CCCCGTGGACCCTTCTATCCATATCAGAGCCAGTGCCAAAAATAGGTCTGAGAGGATCCA
AGGAGGATCAGATCGTTCTGATCATGAGGGGCAATTTGTTGGGCCTGTGGGTCATGGTCA
TGAGAAAGATTACTATTATCAAGATGATATAACTGGTGACCCCTTGCGAAGACCTAGATC
ATTGAGGAGGAGACGCTCTAAATCTTTGAGTCATGAAGATAGTGACCATATTGAAGGTGC
AGGAGTTGTAAAGAGAAATTCAAGTAGCAGGAGAAGAGAGCACTCAAGACGAGGTATGCA
AGTTGTGCTTGATGATGGACGATATGAGATAGATGAAGAGGAAAGGATAATAGATCGACT
GTTGTTACATTATAGTAAGAAACCAACAGCCTATGAGCCAGGAAAGGTGAGGAAGAAATC
TAAAGCCCATCCTTCACATCACTCGGGTGAATCGCCAGAAAATGAAAGCAAAGAGGGTCC
TGGTGTGAAGTCAGAGATCGTTCCTACCACAGCGAGATCGGTTTCTCTCCCCAGGGAACA
AACATCTACTTCTGAAGCAACTAAAGTATTTGCTCGCACTAAATCTTTTCAACCGGATAT
GTTGAACCAGGCACGGCACGTGCATCCTAAGCTACCAGATTATGATGATTTGGCTGCTCG
GTTTGCAGCCTTGAAAGGGAGGTAAAGAGTAAGGGCAAGTGAAACCTCAGAATGTTCACT
GTTTTCATTTCCATTGCTGTATAACCAGGTCTGTTCCTTGCTCTCTTGCAGAGGCTTATG
CTCCAAACACTAATGGTGAGAAACTCCTTCTGGGTTTACCTTACAAGTGACACAGTTCTT
TGAATTCCCAGTAATTGGAGCATCACCTTTCAGGGACTTGCCCAACTGGCATTTCATTTT
CTTTTCAGTGCATGGGAGATCTGTTTGCAATATACTTTGGGTTCACTTTGGTTTCAGTTT
CCATTACATTTGATTTTCCAGACTACTTGGTTGTAAAATTTGTAACAATGCAATATGATA
CAGATTTTTTTATAGGTACTATATAGAAGTTGAGTTTGAGATACTGCTACTATGTCATCA
GAGTTGCATTGCTATAATTGAATGAGGGGATGGTTACAGTTTAA