Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g03950.t01
CDS Infomation

cds chromosome:12X:11:3234837:3236255:1 gene:VIT_11s0016g03950 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGTTCCATCCTGTCCCCATCATCATCCTCATCTCGCTCGCAGTTGTTGTTGCTGAT
GCTACTGTGCCTTCTGACGTTTACTGGCAGAAGGTGTTGCCTAATACTGCAATGCCGAAA
GCTCTCCGACATCTTCTACCCGAAGAGGATGAAGGTCTTGGGGATGAAGCAGTGGACGTA
GGTGTTGGCGGTGGTGGAGTATCTGTGGGCACAGGACCCGACGGATCCAAGTACCTATGG
TGGCGGCACCACCCACACCATCCATACCATCCATGGCACGAGCCATTTATATACCGTTAC
GCTGCTTCTCAGGATCAGCTCCGAGACGATCCGAATGTGGCTCTCTTCTTCCTAGAAAAA
GACTTGCATCCTAGCAAAAAACTGAACCTTCACTTCACTAAAACTACATCCGGAGCCAAA
CTTCTACCCCGCCATGTTGCTGAAACCATACCCTTTTCGTCGAACGAGTTCTCAGACATC
CTGAACCGGTTTTCTGTTGAGCCTGGATCGGCTGAAGCTTTGGAGATGAAGAAGACCATT
GAAGAGTGTGAGGTGCCAGCTATGGAGGGAGAGGACAAATACTGTGCCACATCGCTGGAG
GCAATGGTAGATTATAGCACTTCAAAGCTGGGAAAAAATGTCAAAGTTATGGCGACTGAG
GTGGGTAAAGAGGAGAGTCCTCAGCAGGAATTCACCATCTCACCGGGACTTACAAAGATG
GTAGGGGACAAAAGAGTGGTATGCCATGGCCAGAACTATCCATATGCTGTCTTCCACTGC
CACGCTTCGCATGCAACAAAAGCTTACCTGGTTCCAATGGTGGGTGCCGATGGGACCAAA
GTCAAGGCTGTTGCTGCATGCCACATAGACCCATCCAAATGGAATCCCAGGCACTTGGCT
TTTCAAGTGCTCAAGGTTAAGCCAGGGACGGTTCCCATATGTCACTTCCTTCCGGAGGAC
CATATCGTTTGGACTTCCAAGTAG

Peptide Sequence

PEP ID

VIT_11s0016g03950.t01
PEP Infomation

pep chromosome:12X:11:3234837:3236255:1 gene:VIT_11s0016g03950 transcript:VIT_11s0016g03950.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEFHPVPIIILISLAVVVADATVPSDVYWQKVLPNTAMPKALRHLLPEEDEGLGDEAVDV
GVGGGGVSVGTGPDGSKYLWWRHHPHHPYHPWHEPFIYRYAASQDQLRDDPNVALFFLEK
DLHPSKKLNLHFTKTTSGAKLLPRHVAETIPFSSNEFSDILNRFSVEPGSAEALEMKKTI
EECEVPAMEGEDKYCATSLEAMVDYSTSKLGKNVKVMATEVGKEESPQQEFTISPGLTKM
VGDKRVVCHGQNYPYAVFHCHASHATKAYLVPMVGADGTKVKAVAACHIDPSKWNPRHLA
FQVLKVKPGTVPICHFLPEDHIVWTSK

Transcript Sequence

Transcript ID

VIT_11s0016g03950.t01
Transcript Infomation

cdna chromosome:12X:11:3234837:3236255:1 gene:VIT_11s0016g03950 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAACCATATAGCTTTTGAGCTTGAGTCCTTCAATGGAGTTCCATCCTGTCCCCATCATCA
TCCTCATCTCGCTCGCAGTTGTTGTTGCTGATGCTACTGTGCCTTCTGACGTTTACTGGC
AGAAGGTGTTGCCTAATACTGCAATGCCGAAAGCTCTCCGACATCTTCTACCCGAAGAGG
ATGAAGGTCTTGGGGATGAAGCAGTGGACGTAGGTGTTGGCGGTGGTGGAGTATCTGTGG
GCACAGGACCCGACGGATCCAAGTACCTATGGTGGCGGCACCACCCACACCATCCATACC
ATCCATGGCACGAGCCATTTATATACCGTTACGCTGCTTCTCAGGATCAGCTCCGAGACG
ATCCGAATGTGGCTCTCTTCTTCCTAGAAAAAGACTTGCATCCTAGCAAAAAACTGAACC
TTCACTTCACTAAAACTACATCCGGAGCCAAACTTCTACCCCGCCATGTTGCTGAAACCA
TACCCTTTTCGTCGAACGAGTTCTCAGACATCCTGAACCGGTTTTCTGTTGAGCCTGGAT
CGGCTGAAGCTTTGGAGATGAAGAAGACCATTGAAGAGTGTGAGGTGCCAGCTATGGAGG
GAGAGGACAAATACTGTGCCACATCGCTGGAGGCAATGGTAGATTATAGCACTTCAAAGC
TGGGAAAAAATGTCAAAGTTATGGCGACTGAGGTGGGTAAAGAGGAGAGTCCTCAGCAGG
AATTCACCATCTCACCGGGACTTACAAAGATGGTAGGGGACAAAAGAGTGGTATGCCATG
GCCAGAACTATCCATATGCTGTCTTCCACTGCCACGCTTCGCATGCAACAAAAGCTTACC
TGGTTCCAATGGTGGGTGCCGATGGGACCAAAGTCAAGGCTGTTGCTGCATGCCACATAG
ACCCATCCAAATGGAATCCCAGGCACTTGGCTTTTCAAGTGCTCAAGGTTAAGCCAGGGA
CGGTTCCCATATGTCACTTCCTTCCGGAGGACCATATCGTTTGGACTTCCAAGTAGAAAT
GCCCGACCCAAAACCACTGCTTCTTTGGGCTACCAGCTTTAGTTTTCTTAGTATGATAAG
ATAACACAAAGCTCTAAGTGTACCTCCCCTATGTAAGATATATGACAGTCAGTCATACCT
ATAGCACTGGCTGGAGATGTGGGTTATTCAAAATAATAGTTTTACCACTTTTTCTGTTTG
ACAACA