Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g03900.t01
CDS Infomation

cds chromosome:12X:11:3182349:3186809:1 gene:VIT_11s0016g03900 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAGAGGCCTCTGGATCAACGCTCCAGATCTTCCAAGCCCACCACCATCCATGGCTGT
GCTCAGTCCGGTGATCTTCTCGCCCTTCAGAAGCTACTTCGGGGCAACCCTTCTCTCCTC
AACGACCGAAACCCTGTTATGGCACAGACACCACTTCATGTTTCTTCTGGTTACAACAAT
GTTGAGATAGTTAAGTTTCTGCTCAATTGGCAAGGACCTGAAAAGGTGGAGTTGGAAGCA
AAGAACATGTACGGAGAAACTCCATTGCATATGGCAGCAAAGAATGGTTGCAATGCAGCT
GCACAGTTGCTTCTTGCTCATGGTGCTATTGTTGAAGCCAAAGCAAATAATGGAATGACA
CCATTACACCTTGCTGTTTGGTACTCGCTCCGGGCTGAAGACTGCTCAACTGTCAAGACT
TTGCTCGACTACAATGCTGATTGCAGTTCTAAAGACAATGAGGGTATGACTCCCCTTAAT
CATCTCTCACAAGGCCCAGGAAGTGAGAAGTTGCGGGAACTTCTGCATCGGTATTTGGAT
GAGCAGATAAAACGAAGAGCCCTTGAAGCATGCAGTGAGACAAAAGCTAAGATGGATGAA
CTTGAAGATGCATTATCAAATATTGTGGGTTTGAATGACCTAAAGTCACAGCTTCGGAGA
TGGGCAAAGGGCATGCTTTTGGACGAAAGGCGCAAGGCCCTTGGGCTAAAAGTTGGCAGC
CGAAAACCACCTCATATGGCTTTCCTTGGCAATCCTGGAACTGGTAAAACTATGGTTGCG
AGAGTCCTTGGAAGGTTACTACACATGGTGGGAGTTTTACCTACTGACAAAGTAACTGAA
GTCCAGCGGACTGATTTGGTTGGGGAATTTGTTGGTCATACAGGACCAAAGACAAGAAGA
AAAATCAAAGAAGCAGAGGGAGGAATTCTCTTTGTAGACGAAGCCTACAGACTTATACCT
ATGCAGAAGTCGGATGATAAAGACTATGGGTTGGAAGCCTTAGAGGAGATAATGTCTGTC
ATGGACAGTGGGAAAGTAGTAGTCATCTTTGCTGGCTACAGTGAACCAATGAAGCGGGTG
ATCTCGTCAAATGAAGGCTTTTGCAGAAGGGTGACAAAGTTTTTCCATTTTGGTGACTTC
AATTCACAAGAATTGGCCAAGATTCTGAATCTGAAAATGAACAATCAGACAGAAGACAGC
TTGTTGTATGGATTCAGATTACATCCTTCATGCAGTGTGGACTCCGTTGCAGCACTGATA
GAGAGAGAAACAACAGAAAAGCAGAGGAAGGAGATGAATGGAGGGTTGGTTGATCCAATG
CTGGTGAATGCTAGAGAGAATTTGGACCTCAGGCTGAGTTTTGAGTGTATAGATACAGAT
GAACTACTTACCATCACCATAGAGGATTTAGAAGCTGGCCTTAGCCTATTATCACAGCAA
GTCCAGCATGACTAA

Peptide Sequence

PEP ID

VIT_11s0016g03900.t01
PEP Infomation

pep chromosome:12X:11:3182349:3186809:1 gene:VIT_11s0016g03900 transcript:VIT_11s0016g03900.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQRPLDQRSRSSKPTTIHGCAQSGDLLALQKLLRGNPSLLNDRNPVMAQTPLHVSSGYNN
VEIVKFLLNWQGPEKVELEAKNMYGETPLHMAAKNGCNAAAQLLLAHGAIVEAKANNGMT
PLHLAVWYSLRAEDCSTVKTLLDYNADCSSKDNEGMTPLNHLSQGPGSEKLRELLHRYLD
EQIKRRALEACSETKAKMDELEDALSNIVGLNDLKSQLRRWAKGMLLDERRKALGLKVGS
RKPPHMAFLGNPGTGKTMVARVLGRLLHMVGVLPTDKVTEVQRTDLVGEFVGHTGPKTRR
KIKEAEGGILFVDEAYRLIPMQKSDDKDYGLEALEEIMSVMDSGKVVVIFAGYSEPMKRV
ISSNEGFCRRVTKFFHFGDFNSQELAKILNLKMNNQTEDSLLYGFRLHPSCSVDSVAALI
ERETTEKQRKEMNGGLVDPMLVNARENLDLRLSFECIDTDELLTITIEDLEAGLSLLSQQ
VQHD

Transcript Sequence

Transcript ID

VIT_11s0016g03900.t01
Transcript Infomation

cdna chromosome:12X:11:3182349:3186809:1 gene:VIT_11s0016g03900 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTATGAGTTGGACGCGAGAGTCGGAGGCGGGGTTGATTTTCATTGCAGAGAGAGCGCGGA
AGATTCGGTTGAGAAGAAAATCCTCAGAAAAAGAGGCCCCAAGAATCTATCTCCCCCCTC
AATTTCCTCCCTTTGTTGTTGTTTGGTACGAGATACGAGGGAATTGAAGACAAGGGAGAT
AGATATGCAGAGGCCTCTGGATCAACGCTCCAGATCTTCCAAGCCCACCACCATCCATGG
CTGTGCTCAGTCCGGTGATCTTCTCGCCCTTCAGAAGCTACTTCGGGGCAACCCTTCTCT
CCTCAACGACCGAAACCCTGTTATGGCACAGACACCACTTCATGTTTCTTCTGGTTACAA
CAATGTTGAGATAGTTAAGTTTCTGCTCAATTGGCAAGGACCTGAAAAGGTGGAGTTGGA
AGCAAAGAACATGTACGGAGAAACTCCATTGCATATGGCAGCAAAGAATGGTTGCAATGC
AGCTGCACAGTTGCTTCTTGCTCATGGTGCTATTGTTGAAGCCAAAGCAAATAATGGAAT
GACACCATTACACCTTGCTGTTTGGTACTCGCTCCGGGCTGAAGACTGCTCAACTGTCAA
GACTTTGCTCGACTACAATGCTGATTGCAGTTCTAAAGACAATGAGGGTATGACTCCCCT
TAATCATCTCTCACAAGGCCCAGGAAGTGAGAAGTTGCGGGAACTTCTGCATCGGTATTT
GGATGAGCAGATAAAACGAAGAGCCCTTGAAGCATGCAGTGAGACAAAAGCTAAGATGGA
TGAACTTGAAGATGCATTATCAAATATTGTGGGTTTGAATGACCTAAAGTCACAGCTTCG
GAGATGGGCAAAGGGCATGCTTTTGGACGAAAGGCGCAAGGCCCTTGGGCTAAAAGTTGG
CAGCCGAAAACCACCTCATATGGCTTTCCTTGGCAATCCTGGAACTGGTAAAACTATGGT
TGCGAGAGTCCTTGGAAGGTTACTACACATGGTGGGAGTTTTACCTACTGACAAAGTAAC
TGAAGTCCAGCGGACTGATTTGGTTGGGGAATTTGTTGGTCATACAGGACCAAAGACAAG
AAGAAAAATCAAAGAAGCAGAGGGAGGAATTCTCTTTGTAGACGAAGCCTACAGACTTAT
ACCTATGCAGAAGTCGGATGATAAAGACTATGGGTTGGAAGCCTTAGAGGAGATAATGTC
TGTCATGGACAGTGGGAAAGTAGTAGTCATCTTTGCTGGCTACAGTGAACCAATGAAGCG
GGTGATCTCGTCAAATGAAGGCTTTTGCAGAAGGGTGACAAAGTTTTTCCATTTTGGTGA
CTTCAATTCACAAGAATTGGCCAAGATTCTGAATCTGAAAATGAACAATCAGACAGAAGA
CAGCTTGTTGTATGGATTCAGATTACATCCTTCATGCAGTGTGGACTCCGTTGCAGCACT
GATAGAGAGAGAAACAACAGAAAAGCAGAGGAAGGAGATGAATGGAGGGTTGGTTGATCC
AATGCTGGTGAATGCTAGAGAGAATTTGGACCTCAGGCTGAGTTTTGAGTGTATAGATAC
AGATGAACTACTTACCATCACCATAGAGGATTTAGAAGCTGGCCTTAGCCTATTATCACA
GCAAGTCCAGCATGACTAAAAAAGTAAAAAGAAAAAAAAAAAACAAAACCCAACTACAAA
TCTATTGGCATCTCAGCATG