Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g03890.t01
CDS Infomation

cds chromosome:12X:11:3174051:3179257:-1 gene:VIT_11s0016g03890 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGCAGTCACCAAACTCCAAATCTCTCCATACAGCTTACACCCCCGGACCCACCAC
AGAGCCGCCCGGTGGCCTCTGCGTCGGCCGCAATTTGTTTCTTTTAGGGGCCGCCGTGGG
GTTTATCTCCTGCCGTGCAGGTCATTCAGGTCTGGAGATGGAGGTGAATTGGAGGAGCAA
GAGAAGGAAAGTGTGCGAAAAGGCGGGAATTTGAAGGAAAATAGAGTGGAGGGCAAGGAG
GGATCGGGAATTCTGAGTTTCGCCAAGTCCGTGTTTGTTAGGGTTTCCGGTTCGTTCCCG
CGGACGGAGGAGGAGCACCGTATTGCGGTGGCCAAGTTGGAGGAGATTTTCTCCTCGATT
GCTGTGCAAATTGGAAGATATATCGTGACCATGATGAGCACCGGAGTGATACTAGCAATT
GGATTTCAGTTGTCAGGTGGAGACAGCCAGATGAATGCTTTGATTTGGTATAGCTGGCTT
GGAGGAATTATTATTGGAACTATGATAGGTGCTAACTTGGTTCTAGAGGAACACTGTCGA
GCTGGTCCCCGTAATGTTGTCATAACTGGAAGTACAAGGGGACTGGGGAAAGCTCTTGCC
AGGGAGTTCCTTCTTTCTGGAGATCGTGTCGTTGTTGCTTCCCGCAGCCCTGAGTCTGTA
CATGCAACTGTCAGGGAGCTTGAGGAGAATCTAAAGGAGGGTATGGTCACTGCAGGTGGC
CCATCTAAGACAAATTTGGAGCGTGCAAAAGTGGTAGGCATAGCATGTGATGTTTGTGAA
CCTGATGATGTGCAAAAATTGGCAAACTTTGCTGTCAGTGAATTTGGATCCATTAACATT
TGGATAAACAATGCTGGCACGAATAAAGGTTTTAGACCCTTGCTACAGTTTACTGATGAA
GATATTAAACAGATTGTTTCAACAAACCTGGTTGGATCTTTACTTTGCACTCAAGAAGCC
ATTCGAGTGATGAGAAGCCAGGGTAATGGGGGTCATATTTTCAATATGGACGGTGCAGGC
TCTGGAGGATCTAGCACCCCTTTGACAGCTGTCTATGGATCCACAAAGTGTGGTCTTAGG
CAGCTTCAAGGATCACTCTTGAAGGAGTGCAAGCGATCCAATGTTGGAGTGCATACGGCA
TCTCCAGGCATGGTCCTTACAGATTTGCTTCTAAGTGGCTCCACCATTCAGAATAAACAA
ATGTTTAACATTATCTGTGAGCTTCCTGAAACAGTCGCTAGAACTTTAGTTCCACGGATG
CGGGTTGTAAAGGGAACTGGGAAGGCTATCAATTACTTGACCCCTCCTAGGATTCTACTT
GCTTTGATCACTGTCTGGCTGCGACAAGGTCGCTGGTTTGACGAGCAGGGAAGAGCACTA
TATGCAGCAGAGGCAGACCGAATCCGCAACTGGGCTGAAAACCGCACACGGTTCTCTTTC
ACAGATGCAATGGAGATGTACACTGAGAACACTTGGGTGTCTGTCTTCTCACTTTCTGTT
GTTTGTGCCTTCATCATCCTTTCTAGCACAGGAAGCTCATTTCCTGGCACCTGA

Peptide Sequence

PEP ID

VIT_11s0016g03890.t01
PEP Infomation

pep chromosome:12X:11:3174051:3179257:-1 gene:VIT_11s0016g03890 transcript:VIT_11s0016g03890.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAAVTKLQISPYSLHPRTHHRAARWPLRRPQFVSFRGRRGVYLLPCRSFRSGDGGELEEQ
EKESVRKGGNLKENRVEGKEGSGILSFAKSVFVRVSGSFPRTEEEHRIAVAKLEEIFSSI
AVQIGRYIVTMMSTGVILAIGFQLSGGDSQMNALIWYSWLGGIIIGTMIGANLVLEEHCR
AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSPESVHATVRELEENLKEGMVTAGG
PSKTNLERAKVVGIACDVCEPDDVQKLANFAVSEFGSINIWINNAGTNKGFRPLLQFTDE
DIKQIVSTNLVGSLLCTQEAIRVMRSQGNGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLR
QLQGSLLKECKRSNVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRM
RVVKGTGKAINYLTPPRILLALITVWLRQGRWFDEQGRALYAAEADRIRNWAENRTRFSF
TDAMEMYTENTWVSVFSLSVVCAFIILSSTGSSFPGT

Transcript Sequence

Transcript ID

VIT_11s0016g03890.t01
Transcript Infomation

cdna chromosome:12X:11:3174051:3179257:-1 gene:VIT_11s0016g03890 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACAAACAGAGAAATACGCTCCCAGAAGCTTCATACAATTGCATGAACTCAAGCAATGGCT
GCAGTCACCAAACTCCAAATCTCTCCATACAGCTTACACCCCCGGACCCACCACAGAGCC
GCCCGGTGGCCTCTGCGTCGGCCGCAATTTGTTTCTTTTAGGGGCCGCCGTGGGGTTTAT
CTCCTGCCGTGCAGGTCATTCAGGTCTGGAGATGGAGGTGAATTGGAGGAGCAAGAGAAG
GAAAGTGTGCGAAAAGGCGGGAATTTGAAGGAAAATAGAGTGGAGGGCAAGGAGGGATCG
GGAATTCTGAGTTTCGCCAAGTCCGTGTTTGTTAGGGTTTCCGGTTCGTTCCCGCGGACG
GAGGAGGAGCACCGTATTGCGGTGGCCAAGTTGGAGGAGATTTTCTCCTCGATTGCTGTG
CAAATTGGAAGATATATCGTGACCATGATGAGCACCGGAGTGATACTAGCAATTGGATTT
CAGTTGTCAGGTGGAGACAGCCAGATGAATGCTTTGATTTGGTATAGCTGGCTTGGAGGA
ATTATTATTGGAACTATGATAGGTGCTAACTTGGTTCTAGAGGAACACTGTCGAGCTGGT
CCCCGTAATGTTGTCATAACTGGAAGTACAAGGGGACTGGGGAAAGCTCTTGCCAGGGAG
TTCCTTCTTTCTGGAGATCGTGTCGTTGTTGCTTCCCGCAGCCCTGAGTCTGTACATGCA
ACTGTCAGGGAGCTTGAGGAGAATCTAAAGGAGGGTATGGTCACTGCAGGTGGCCCATCT
AAGACAAATTTGGAGCGTGCAAAAGTGGTAGGCATAGCATGTGATGTTTGTGAACCTGAT
GATGTGCAAAAATTGGCAAACTTTGCTGTCAGTGAATTTGGATCCATTAACATTTGGATA
AACAATGCTGGCACGAATAAAGGTTTTAGACCCTTGCTACAGTTTACTGATGAAGATATT
AAACAGATTGTTTCAACAAACCTGGTTGGATCTTTACTTTGCACTCAAGAAGCCATTCGA
GTGATGAGAAGCCAGGGTAATGGGGGTCATATTTTCAATATGGACGGTGCAGGCTCTGGA
GGATCTAGCACCCCTTTGACAGCTGTCTATGGATCCACAAAGTGTGGTCTTAGGCAGCTT
CAAGGATCACTCTTGAAGGAGTGCAAGCGATCCAATGTTGGAGTGCATACGGCATCTCCA
GGCATGGTCCTTACAGATTTGCTTCTAAGTGGCTCCACCATTCAGAATAAACAAATGTTT
AACATTATCTGTGAGCTTCCTGAAACAGTCGCTAGAACTTTAGTTCCACGGATGCGGGTT
GTAAAGGGAACTGGGAAGGCTATCAATTACTTGACCCCTCCTAGGATTCTACTTGCTTTG
ATCACTGTCTGGCTGCGACAAGGTCGCTGGTTTGACGAGCAGGGAAGAGCACTATATGCA
GCAGAGGCAGACCGAATCCGCAACTGGGCTGAAAACCGCACACGGTTCTCTTTCACAGAT
GCAATGGAGATGTACACTGAGAACACTTGGGTGTCTGTCTTCTCACTTTCTGTTGTTTGT
GCCTTCATCATCCTTTCTAGCACAGGAAGCTCATTTCCTGGCACCTGACCCTTCACATCT
CACTTGCCACTAGAAATCATCAAACTCCAAATCCATCTGGCCATTGCACTTACTGAAGGA
AGCCAACCGAAATATCCAATACTACAAAGTCATAACAGAAAGGTACAACACAAATGGGTG
ATAGTTTTTCTCCCCTAAGTCCCTTACACCTACCTCCAACTATTACTAGGTGCAAAATTG
TTTTAGATCACAGCCAGATGTTTAACCCACCTATGTACTGGACTGGATTCTGTGATGGGC
CCTGTGGGTTCTGTATAGACCACCCAGCACATTAT