Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g03860.t01
CDS Infomation

cds chromosome:12X:11:3143481:3153202:-1 gene:VIT_11s0016g03860 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCAGGATTCGTCGTATCTTCCCAGGCCAGAGTCACATCAAATTTTGCAGTAGCC
TCTATTTCTAGGGTTTTATCAACAAAATGCAGAAACTCACTTATCTCCAGTCAGCTCTGC
TCATCTCGCGCTCCTTCGAATCGCTTCTTCTGCGAGTGTTCCCATCTCCAAGACCCAGTC
GACTTCATCAAATACAAAGAGGTTTTCTCGCGGCGAATGGCCATGGCTGGTCTTAAACCT
CACCACCGCATCGCTCTTGGAGTGTCGGGTGGACCCGACAGTATGGCGCTGTGTATTCTA
ACAGCTGATTGGAAAACCAATGGCCTCAATACTGCTGGTGAGAGCCGTGGTTTCATTGAT
GGGCTTTTGGCAATAATAGTTGATCATGGACTGCGAGCAGAGAGTAAAGATGAGGCAAAC
ATTGTTCGCCATAGAGTTTCTGATATGGGAATCAGATGTGAGATTGCCCAATGTGATTGG
TTAGATGGTAAGCCAAAACAGGGTCACTTGCAAGAAGCAGCTCGTGAAATGAGGTATCAA
ATTTTCCAAAATGTTTGCATTCAACATCAGATTGGGGTGTTGCTTGTTGCCCATCATGCA
GATGACCAGGTTGAGCTCTTCATTCTCAGGCTATCCCGTGATAGTGGTGTACTTGGACTA
GCTGGCATGGCTTTTGCTTCTCAGTTGTTCTCAACTTATACAAATTATTTTGATGAAGCT
TCTGACAATTACAGTATTTTGTTAGTGCGTCCACTCCTAGAGTTCTCAAAAGAAGATTTG
TATAAGATATGTGAAGGGGGTAATCAAGAATGGGTAGAAGATCCAACAAATCAAAATCCA
TCATTTGCCCGTAACAGGATTCGATTGTCATTAAGAAATTTGCCATCATGTACCTTCAAG
TATGAATTACAGGCAGTTATATCTGCCTGTCGAAAAACACGTGCATATGTTGACCAAATT
TGCTCTAACTTGATTAATGAAGTTGTATCTGTCATGGCTCAGGGGTATGCTGTTATTGAT
TTAGAGATTTTGCATCCATCGAAAATTGAGGACATATGCCTGTCAAAGTTTATTGCTTTG
GTTTTGCAGTTCATCTCACAGAGGCACAGGCCAGTTCGAGGCAGTACTTCAAAATTGCTA
CTGGACTATATTCGTACTTTCCCATGCAAGACATCCCTTACTGCAGCTGGTTGTTACCTG
TGTGCAGCTCCTCGGTCTAAAGGTACCAAACTCCTGGTTTGCTGCTCTGTCAATTCTCCT
CTACCTTCAAAAATGGAGTTGTTCTACAGACACTGTTATGAAACTCACAAGCACTATATT
CCAAGTGAAGTTGAGCAAATTATAGTAGATGGGAAAGCAAACTCAGATAACCTGGTTCCT
GATGCTTCAGATGTGCAATTTTTGGATGTAGCTTCTTCTGAATCGATTCTAGTGGAAGCC
AAAAGACGTAATATCCTCAGTGAGTCAACATATAGTAATATTCTTTCATTGCAGGAGGAT
GAAACCAAGCATTTCAAGTCCAAAACTAAAACTATTTCTGACCATGACTTAAAAATGCAT
GGAGTGCATACTGTTAGCACTTCTCTGAGTCTGCCTCTTCAACCTGGCCAAATTTGTTAC
TTCATGAACAGATTCTTGGTCTCCTGGAACCTGAGCAATAAAATTTCTGGAGATAAGTCT
CCTGTAGAAGAGGCAAGTTGTAACAGGGACTTGGCAGGGAAAAGTTTGCATCACTTTTGC
AGACATTGCATGGTTGGTCATGACATGGTAGCTGAGGTTCGCCACATGGTTGATGCTGAT
TGGCTCTATCTTGCAAAGTTGTCAAAGCATCAGAATTTGGAAAACCATGAAAAGGAAAGA
GTTATTTTGGCTAGTGCCATGGAGCAAATCTCAGAGAAGACAATTTTATGTTCAGATTTT
GCAAGGTTATCAGCAGAAAGAGCTCTCCACTCATTGAAGTCTATCCCTGTTGCCGCTAGG
AGAAGCCTACCTGTCCTAATCAATTCTCATGGACTATTGTTAAGCATCCCGAGTATTTGC
TTCAGGCATTGCCCATACTTGATGGTATCTGCTGTATTTAAGCCAAGAGTACCACTTGGT
GGAGGACATAGTTCATTTTTGTAG

Peptide Sequence

PEP ID

VIT_11s0016g03860.t01
PEP Infomation

pep chromosome:12X:11:3143481:3153202:-1 gene:VIT_11s0016g03860 transcript:VIT_11s0016g03860.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASGFVVSSQARVTSNFAVASISRVLSTKCRNSLISSQLCSSRAPSNRFFCECSHLQDPV
DFIKYKEVFSRRMAMAGLKPHHRIALGVSGGPDSMALCILTADWKTNGLNTAGESRGFID
GLLAIIVDHGLRAESKDEANIVRHRVSDMGIRCEIAQCDWLDGKPKQGHLQEAAREMRYQ
IFQNVCIQHQIGVLLVAHHADDQVELFILRLSRDSGVLGLAGMAFASQLFSTYTNYFDEA
SDNYSILLVRPLLEFSKEDLYKICEGGNQEWVEDPTNQNPSFARNRIRLSLRNLPSCTFK
YELQAVISACRKTRAYVDQICSNLINEVVSVMAQGYAVIDLEILHPSKIEDICLSKFIAL
VLQFISQRHRPVRGSTSKLLLDYIRTFPCKTSLTAAGCYLCAAPRSKGTKLLVCCSVNSP
LPSKMELFYRHCYETHKHYIPSEVEQIIVDGKANSDNLVPDASDVQFLDVASSESILVEA
KRRNILSESTYSNILSLQEDETKHFKSKTKTISDHDLKMHGVHTVSTSLSLPLQPGQICY
FMNRFLVSWNLSNKISGDKSPVEEASCNRDLAGKSLHHFCRHCMVGHDMVAEVRHMVDAD
WLYLAKLSKHQNLENHEKERVILASAMEQISEKTILCSDFARLSAERALHSLKSIPVAAR
RSLPVLINSHGLLLSIPSICFRHCPYLMVSAVFKPRVPLGGGHSSFL

Transcript Sequence

Transcript ID

VIT_11s0016g03860.t01
Transcript Infomation

cdna chromosome:12X:11:3143481:3153202:-1 gene:VIT_11s0016g03860 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCAGGATTCGTCGTATCTTCCCAGGCCAGAGTCACATCAAATTTTGCAGTAGCC
TCTATTTCTAGGGTTTTATCAACAAAATGCAGAAACTCACTTATCTCCAGTCAGCTCTGC
TCATCTCGCGCTCCTTCGAATCGCTTCTTCTGCGAGTGTTCCCATCTCCAAGACCCAGTC
GACTTCATCAAATACAAAGAGGTTTTCTCGCGGCGAATGGCCATGGCTGGTCTTAAACCT
CACCACCGCATCGCTCTTGGAGTGTCGGGTGGACCCGACAGTATGGCGCTGTGTATTCTA
ACAGCTGATTGGAAAACCAATGGCCTCAATACTGCTGGTGAGAGCCGTGGTTTCATTGAT
GGGCTTTTGGCAATAATAGTTGATCATGGACTGCGAGCAGAGAGTAAAGATGAGGCAAAC
ATTGTTCGCCATAGAGTTTCTGATATGGGAATCAGATGTGAGATTGCCCAATGTGATTGG
TTAGATGGTAAGCCAAAACAGGGTCACTTGCAAGAAGCAGCTCGTGAAATGAGGTATCAA
ATTTTCCAAAATGTTTGCATTCAACATCAGATTGGGGTGTTGCTTGTTGCCCATCATGCA
GATGACCAGGTTGAGCTCTTCATTCTCAGGCTATCCCGTGATAGTGGTGTACTTGGACTA
GCTGGCATGGCTTTTGCTTCTCAGTTGTTCTCAACTTATACAAATTATTTTGATGAAGCT
TCTGACAATTACAGTATTTTGTTAGTGCGTCCACTCCTAGAGTTCTCAAAAGAAGATTTG
TATAAGATATGTGAAGGGGGTAATCAAGAATGGGTAGAAGATCCAACAAATCAAAATCCA
TCATTTGCCCGTAACAGGATTCGATTGTCATTAAGAAATTTGCCATCATGTACCTTCAAG
TATGAATTACAGGCAGTTATATCTGCCTGTCGAAAAACACGTGCATATGTTGACCAAATT
TGCTCTAACTTGATTAATGAAGTTGTATCTGTCATGGCTCAGGGGTATGCTGTTATTGAT
TTAGAGATTTTGCATCCATCGAAAATTGAGGACATATGCCTGTCAAAGTTTATTGCTTTG
GTTTTGCAGTTCATCTCACAGAGGCACAGGCCAGTTCGAGGCAGTACTTCAAAATTGCTA
CTGGACTATATTCGTACTTTCCCATGCAAGACATCCCTTACTGCAGCTGGTTGTTACCTG
TGTGCAGCTCCTCGGTCTAAAGGTACCAAACTCCTGGTTTGCTGCTCTGTCAATTCTCCT
CTACCTTCAAAAATGGAGTTGTTCTACAGACACTGTTATGAAACTCACAAGCACTATATT
CCAAGTGAAGTTGAGCAAATTATAGTAGATGGGAAAGCAAACTCAGATAACCTGGTTCCT
GATGCTTCAGATGTGCAATTTTTGGATGTAGCTTCTTCTGAATCGATTCTAGTGGAAGCC
AAAAGACGTAATATCCTCAGTGAGTCAACATATAGTAATATTCTTTCATTGCAGGAGGAT
GAAACCAAGCATTTCAAGTCCAAAACTAAAACTATTTCTGACCATGACTTAAAAATGCAT
GGAGTGCATACTGTTAGCACTTCTCTGAGTCTGCCTCTTCAACCTGGCCAAATTTGTTAC
TTCATGAACAGATTCTTGGTCTCCTGGAACCTGAGCAATAAAATTTCTGGAGATAAGTCT
CCTGTAGAAGAGGCAAGTTGTAACAGGGACTTGGCAGGGAAAAGTTTGCATCACTTTTGC
AGACATTGCATGGTTGGTCATGACATGGTAGCTGAGGTTCGCCACATGGTTGATGCTGAT
TGGCTCTATCTTGCAAAGTTGTCAAAGCATCAGAATTTGGAAAACCATGAAAAGGAAAGA
GTTATTTTGGCTAGTGCCATGGAGCAAATCTCAGAGAAGACAATTTTATGTTCAGATTTT
GCAAGGTTATCAGCAGAAAGAGCTCTCCACTCATTGAAGTCTATCCCTGTTGCCGCTAGG
AGAAGCCTACCTGTCCTAATCAATTCTCATGGACTATTGTTAAGCATCCCGAGTATTTGC
TTCAGGCATTGCCCATACTTGATGGTATCTGCTGTATTTAAGCCAAGAGTACCACTTGGT
GGAGGACATAGTTCATTTTTGTAGCTTCTAAAACCCAATTCTGTGGGGTCTTTGTATAAA
CCGCTGGCTACACTTTTCCATTCTGTAATGTCACCTTCAAATACAGAAAGTAATGTAGGA
TATCAATTCTTGATTTGTTATCAAATCTTGTTGT