Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g03740.t01
CDS Infomation

cds chromosome:12X:11:3057526:3060476:-1 gene:VIT_11s0016g03740 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATGGCTCGAGCCCTGGACGGCATTCAGAAATCGAAATCTTTCCGCTTCAAAAAGATG
TTAGAGAGTCCTGGTCGACACGTACGCAGCCTTTTACTTGAAAATGATGATGGAGGAGCT
GGGGATGATAGGGTACAATTTAGAAGTCAAGGGTCGAAAACTGCAGGTGACCGGCCATTG
GAACTCCACCAGACTGGATTTTCCCTTCACCAATCCAGTAATTCAGCTCAATCCAGTAAT
TCGGCTCAATCTAGTAATTCAGCTCAACCTTCACACTCGAGCTTGCGGCCTGGTGCTTCA
CATTCACAAGAGGTGGAGCAGATTAGGGAAAGATTCGCCAAGCTGCTTTTGGGGGAAGAT
ATGTCAGGTCGAGGGACGGGTGTTTCTTCAGCTTTGGCCTTGTCTAATGCCATTACAAAT
CTTGCTGCTTCGGTTTTTGGAGAACAATGGAAACTAGAGCCTATGTCTGCAGAGAGGAAA
GCCATGTGGAGGAAAGACATTGATTTGCTTCTATCTGTAGCTGATTATATTGTCGAACTT
GTCCCTTCTCAACAGACAGCCAAGGATGGAACTACCATGGAGGTAATGGTGTCACGGCAA
AGAAAGGATCTGCTTATGAACATCCCAGCGCTGCGCAAACTGGATGCTATGCTTATTGAG
CACCTGGATAACTTCAAAGGCCCGAATGAGTTCTGGTATGTGTCCAGAGATGCGGAGGAT
GCAGGGAGTAGAGAGGATGACAAATGGTGGCTACCCAGACCCAAGGTTCCTCCCAATGGG
CTATCAGATGCTTCCCGAAAATGGCTGCAATTTCAGAAGGAATCTGTAAACCAAGTGCTA
AAAGCAGCCATGGCCATAAATGCTCAGTTACTATCAGAAATGGAAGTCCCTGATGACTAC
ATTGAATCCCTTCCAAAGAATGGTAGAGCAAGCCTTGGTGACTCAATCTATAAGAGTATT
ACAGTTGAATTCTTTGATCCTGAGCAATTGCTCTCAACCATGGACTTGTCCACAGATCAT
AAAGTGCTTGAATTTAAAAACAAGATAGAGGCCTCTATTGTGATTTGGAAGAGGAAGATG
AACCACAAGGATGGAAAGTCCACCTGGGGTTCAGCTGTGAGCTTGGAGAAGAGGGAACTC
TTTGAAGAAAGAGCAGAGACCATCTTACTCCTACTCAAACAGCGGTTCCCAGGACTTGCT
CAATCTCAGCTGGATACGAGCAAGATCCAGTTTAACCGGGATGTGGGACAGTCTATCCTA
GAGAGCTATTCAAGGATACTAGAAAGCTTGGCCTTCACGGTCATGTCTCGTATTGAAGAT
GTAATGTATGCAGACTCTCTTGCTCAAAATCCATCACTGGCACAAACTGGCAGGAAGCCC
TCAGCAGTCTGCTTGCCATTGACAGGCTCAACCAGGGAAGAGACAGAGAAGAATCCAACA
GAGACACAGACACCGACTTCTATGACATTATCTGATTTCATGGGTTGGCATTTGATGGGA
GATACTGAGCCAGGTAGAAGCTCCTCAGGAAACTCAGATGACTTGAAAGATGACAGTGGC
ATGCTTGCAGGTAAACTTAATAAAGTTGCAATCCATAAGAAAAGCAATTCCTATCTAGAC
AAGCTCGAGAACCTCGGTGGCCTAAGAAGTCCAACATCTCGCCATTGA

Peptide Sequence

PEP ID

VIT_11s0016g03740.t01
PEP Infomation

pep chromosome:12X:11:3057526:3060476:-1 gene:VIT_11s0016g03740 transcript:VIT_11s0016g03740.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MMARALDGIQKSKSFRFKKMLESPGRHVRSLLLENDDGGAGDDRVQFRSQGSKTAGDRPL
ELHQTGFSLHQSSNSAQSSNSAQSSNSAQPSHSSLRPGASHSQEVEQIRERFAKLLLGED
MSGRGTGVSSALALSNAITNLAASVFGEQWKLEPMSAERKAMWRKDIDLLLSVADYIVEL
VPSQQTAKDGTTMEVMVSRQRKDLLMNIPALRKLDAMLIEHLDNFKGPNEFWYVSRDAED
AGSREDDKWWLPRPKVPPNGLSDASRKWLQFQKESVNQVLKAAMAINAQLLSEMEVPDDY
IESLPKNGRASLGDSIYKSITVEFFDPEQLLSTMDLSTDHKVLEFKNKIEASIVIWKRKM
NHKDGKSTWGSAVSLEKRELFEERAETILLLLKQRFPGLAQSQLDTSKIQFNRDVGQSIL
ESYSRILESLAFTVMSRIEDVMYADSLAQNPSLAQTGRKPSAVCLPLTGSTREETEKNPT
ETQTPTSMTLSDFMGWHLMGDTEPGRSSSGNSDDLKDDSGMLAGKLNKVAIHKKSNSYLD
KLENLGGLRSPTSRH

Transcript Sequence

Transcript ID

VIT_11s0016g03740.t01
Transcript Infomation

cdna chromosome:12X:11:3057526:3060476:-1 gene:VIT_11s0016g03740 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATAGAAAATTTGGTTTGGCTCTTGGAAGTTTCCTCTAAATGCGAACGGACCGAAAGCTAG
TGGTGCCAGATGACGAGGTTAGTTAGGTTTCTTTGTCTTTCCCGGGCTTTTTGGCAGCAT
TGACCCTCAAAATCAAAACAAAACCGTTCATTCCTGAAAAGCCTCAAAACAAACCTACCA
AGAATACTCCCCTATCCCCTTTCCTTAACACCAACCTCCCCTTTTCTTTCATTCCCCTGC
AGGCTCGAAGAAAAACGGAATCTCTACAAACCAGAAAAACCCTTTTCCTTTTCATCTCCG
AGCTTTGTTCTGGGAGAAGGGTTTTTCTTCTTTCTCCCTTTTTCTTCCTTCAACCATCAT
TTAGTTTCAATGGCTAAAGGGGCTAAAGCCTCTAAACTATTGTGAAGGCTTTTGTGTTTG
AGGGAGGAAAATAAGGGAAACAAAAAATATACCTCGAGTTTATGATGGCTCGAGCCCTGG
ACGGCATTCAGAAATCGAAATCTTTCCGCTTCAAAAAGATGTTAGAGAGTCCTGGTCGAC
ACGTACGCAGCCTTTTACTTGAAAATGATGATGGAGGAGCTGGGGATGATAGGGTACAAT
TTAGAAGTCAAGGGTCGAAAACTGCAGGTGACCGGCCATTGGAACTCCACCAGACTGGAT
TTTCCCTTCACCAATCCAGTAATTCAGCTCAATCCAGTAATTCGGCTCAATCTAGTAATT
CAGCTCAACCTTCACACTCGAGCTTGCGGCCTGGTGCTTCACATTCACAAGAGGTGGAGC
AGATTAGGGAAAGATTCGCCAAGCTGCTTTTGGGGGAAGATATGTCAGGTCGAGGGACGG
GTGTTTCTTCAGCTTTGGCCTTGTCTAATGCCATTACAAATCTTGCTGCTTCGGTTTTTG
GAGAACAATGGAAACTAGAGCCTATGTCTGCAGAGAGGAAAGCCATGTGGAGGAAAGACA
TTGATTTGCTTCTATCTGTAGCTGATTATATTGTCGAACTTGTCCCTTCTCAACAGACAG
CCAAGGATGGAACTACCATGGAGGTAATGGTGTCACGGCAAAGAAAGGATCTGCTTATGA
ACATCCCAGCGCTGCGCAAACTGGATGCTATGCTTATTGAGCACCTGGATAACTTCAAAG
GCCCGAATGAGTTCTGGTATGTGTCCAGAGATGCGGAGGATGCAGGGAGTAGAGAGGATG
ACAAATGGTGGCTACCCAGACCCAAGGTTCCTCCCAATGGGCTATCAGATGCTTCCCGAA
AATGGCTGCAATTTCAGAAGGAATCTGTAAACCAAGTGCTAAAAGCAGCCATGGCCATAA
ATGCTCAGTTACTATCAGAAATGGAAGTCCCTGATGACTACATTGAATCCCTTCCAAAGA
ATGGTAGAGCAAGCCTTGGTGACTCAATCTATAAGAGTATTACAGTTGAATTCTTTGATC
CTGAGCAATTGCTCTCAACCATGGACTTGTCCACAGATCATAAAGTGCTTGAATTTAAAA
ACAAGATAGAGGCCTCTATTGTGATTTGGAAGAGGAAGATGAACCACAAGGATGGAAAGT
CCACCTGGGGTTCAGCTGTGAGCTTGGAGAAGAGGGAACTCTTTGAAGAAAGAGCAGAGA
CCATCTTACTCCTACTCAAACAGCGGTTCCCAGGACTTGCTCAATCTCAGCTGGATACGA
GCAAGATCCAGTTTAACCGGGATGTGGGACAGTCTATCCTAGAGAGCTATTCAAGGATAC
TAGAAAGCTTGGCCTTCACGGTCATGTCTCGTATTGAAGATGTAATGTATGCAGACTCTC
TTGCTCAAAATCCATCACTGGCACAAACTGGCAGGAAGCCCTCAGCAGTCTGCTTGCCAT
TGACAGGCTCAACCAGGGAAGAGACAGAGAAGAATCCAACAGAGACACAGACACCGACTT
CTATGACATTATCTGATTTCATGGGTTGGCATTTGATGGGAGATACTGAGCCAGGTAGAA
GCTCCTCAGGAAACTCAGATGACTTGAAAGATGACAGTGGCATGCTTGCAGGTAAACTTA
ATAAAGTTGCAATCCATAAGAAAAGCAATTCCTATCTAGACAAGCTCGAGAACCTCGGTG
GCCTAAGAAGTCCAACATCTCGCCATTGAGGATGATAACTATGGAGAAAAAGATAAACAA
AAAGAACAAGGATACAGAGGAAGGCTCAAATAGTGAAAGAGGTTCAACTCATCAAATGTA
AATATTCTATTGTTTTGTCATTCATACTGTTCTTCCTTCCCATTATGGATAGGGAAGCAT
AAGCATTTAACCCTTGGATTTGATGCATCCAGGATGTGCTTCAGGCCACATCCTTTGTTG
AGTCATAGTTGCAGTTACTGTAATGTTTTTTTCTCTGAAGAAACAGTTTACTCCTC