Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g03640.t01
CDS Infomation

cds chromosome:12X:11:2972017:2974625:1 gene:VIT_11s0016g03640 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGCGCTTCGAAGTTCATTAAATGTGTTACAGTTGGAGATGGAGCTGTAGGGAAAACC
TGTATGCTAATTTGTTACACAAGTAACAAGTTCCCCACTGACTATATACCTACAGTGTTT
GACAATTTCAGTGCTAATGTAGCTGTGGATGGGAGCATTGTCAACTTGGGTCTTTGGGAT
ACTGCAGGTCAGGAAGACTATAGCAGGTTGAGGCCACTGAGTTATAGAGGTGCAGACATA
TTTGTTTTAGCTTTTTCATTGATCAGCAGGGCAAGCTATGAAAATGTTCTCAAGAAGTGG
ATGCCTGAACTTCGGCGATTTGCACCCAATGTTCCAATCGTTCTTGTTGGAACAAAGTTA
GATCTTCGTGAAGACAAAGGATATCTAGCTGATCATATGGGATCCAATGTCATAACATCT
GCCCAAGGAGAGGAACTGAGGAAGCAGATTGGTGCAGCAGCTTATATTGAGTGCAGTTCT
AAGACTCAACAGAATGTCAAAGCGGTTTTTGATACTGCAATCAAGGTTGTTCTCCAACCT
CCAAGGAGGAAGGAGGTGGCCAGGAAGAAGAGGCGCAGAAGCACAGGGTGCTCAATTGTG
AGCATTGTATGCGGAGGCTGTGCTGCAGCATAA

Peptide Sequence

PEP ID

VIT_11s0016g03640.t01
PEP Infomation

pep chromosome:12X:11:2972017:2974625:1 gene:VIT_11s0016g03640 transcript:VIT_11s0016g03640.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGSIVNLGLWD
TAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKL
DLREDKGYLADHMGSNVITSAQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQP
PRRKEVARKKRRRSTGCSIVSIVCGGCAAA

Transcript Sequence

Transcript ID

VIT_11s0016g03640.t01
Transcript Infomation

cdna chromosome:12X:11:2972017:2974625:1 gene:VIT_11s0016g03640 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGAGGGAAGATGAGCGCTTCGAAGTTCATTAAATGTGTTACAGTTGGAGATGGAGCTGTA
GGGAAAACCTGTATGCTAATTTGTTACACAAGTAACAAGTTCCCCACTGACTATATACCT
ACAGTGTTTGACAATTTCAGTGCTAATGTAGCTGTGGATGGGAGCATTGTCAACTTGGGT
CTTTGGGATACTGCAGGTCAGGAAGACTATAGCAGGTTGAGGCCACTGAGTTATAGAGGT
GCAGACATATTTGTTTTAGCTTTTTCATTGATCAGCAGGGCAAGCTATGAAAATGTTCTC
AAGAAGTGGATGCCTGAACTTCGGCGATTTGCACCCAATGTTCCAATCGTTCTTGTTGGA
ACAAAGTTAGATCTTCGTGAAGACAAAGGATATCTAGCTGATCATATGGGATCCAATGTC
ATAACATCTGCCCAAGGAGAGGAACTGAGGAAGCAGATTGGTGCAGCAGCTTATATTGAG
TGCAGTTCTAAGACTCAACAGAATGTCAAAGCGGTTTTTGATACTGCAATCAAGGTTGTT
CTCCAACCTCCAAGGAGGAAGGAGGTGGCCAGGAAGAAGAGGCGCAGAAGCACAGGGTGC
TCAATTGTGAGCATTGTATGCGGAGGCTGTGCTGCAGCATAAGGAGGGGGGGCATATTGA
AACGAGGATGGGTGGTGATATCCAACCTTTGACAGGTTCTTTTGAAACTCACATTATATA
TATAATTTGTGTAGGGAGGTGTATTGCAGCTGAAGCAATACATTTTGATGTATCAAATTG
TTAAGTTTGATATGGCAAACTGGCAAGAAGGAAGAGCAAGTGGGAATTGTTCATTCTCTC
ATGCACTCTTGGCATCTTTTAATTTGTGGTTGTTGTGAAGAAGCAGGGAAGACTTATTTT
TATATATTATTATTTTCAGAAGGAAT