Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g03580.t01
CDS Infomation

cds chromosome:12X:11:2928940:2931169:1 gene:VIT_11s0016g03580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTGTTGGTACAGAGGGAGCAGTGTCTGTGAGTAGTATGAAGAAGATCACAAGAGTC
AACAAGGAGGGGCCATATCTGGGTATAGTGGTGCCAAACTCCTATGAGATGGACCCTCTT
CTTCAATCTCCATCCTTTGTGGCTGATGATAAGTTCCCTTACTTGGACTTTGCAGGGAGA
AGGTTCCGAATAGGGAAGTTGGAGACCAAAAATGTTATCATTGTCATGACAGGATTAAGC
ATGCTTAATGCAGGATTAACCACACAGTTGCTGCTAAGCCTGTTTAAGGTCAATGGCGTT
CTGCATTATGGAATTGCAGGAAATGCAAATCCTAATCTTCAAATCGGAGACGTGACGGTC
CCTAAGTATTGGGCTCACACAGGCCTTTGGAATTGGCAGAGGTATGGAGATGGGCCTGGC
GATGAACTAGCCTTTGAATCCAGTGGAGACTACACCAGGAAAATCGGGTACCTCAAATTT
TCTGACTACAACAACCATACCAAAAATGGCAACTCCTCGGATAATCTTCTGAACAACGTA
TGGTATCAACCCGAGGAAGTTTTTCCTGTGACAGGAACACCTGAAGTCAGGCAGCACGCC
TTCTGGGTTCCTGTTGACAAGCATTTCTACCAAGTTGCAGGGAAACTTAAGGATTTGAAG
TTGGAGGGATGCGTGAATTCTACATGTCTGCCAAGAGCTCCAATGGTGACGAGGGTGGAG
AGAGGGGTGAGTGCCAATGTGTTTGTGGACAATGGCGCTTACAGAGAATTCCTATACTCC
AAATTCAACGCCACCCCCGTCGACATGGAGAGCGCTGCGGTTGCTCTGGTCTGTCTCCAA
CAGAAGACTCCCTTCATTGCCATTCGGGCGCTCTCTGATTTAGCTGGAGGAGGTTCAGCT
TTGTCCAATGAGGCCTCCGTCTTTTCTTCATTGGCAGCTCAAAATTCAGTTGATGCTTTA
GTCAGATTCATTGCCTTGTTGTATTCGTAA

Peptide Sequence

PEP ID

VIT_11s0016g03580.t01
PEP Infomation

pep chromosome:12X:11:2928940:2931169:1 gene:VIT_11s0016g03580 transcript:VIT_11s0016g03580.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGVGTEGAVSVSSMKKITRVNKEGPYLGIVVPNSYEMDPLLQSPSFVADDKFPYLDFAGR
RFRIGKLETKNVIIVMTGLSMLNAGLTTQLLLSLFKVNGVLHYGIAGNANPNLQIGDVTV
PKYWAHTGLWNWQRYGDGPGDELAFESSGDYTRKIGYLKFSDYNNHTKNGNSSDNLLNNV
WYQPEEVFPVTGTPEVRQHAFWVPVDKHFYQVAGKLKDLKLEGCVNSTCLPRAPMVTRVE
RGVSANVFVDNGAYREFLYSKFNATPVDMESAAVALVCLQQKTPFIAIRALSDLAGGGSA
LSNEASVFSSLAAQNSVDALVRFIALLYS

Transcript Sequence

Transcript ID

VIT_11s0016g03580.t01
Transcript Infomation

cdna chromosome:12X:11:2928940:2931169:1 gene:VIT_11s0016g03580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTGAAACGGAGGAAGAAGATGGGAAACCATTTGAGAAGTGTGTTGATGGGGTTTTTGGTT
ATGGTGGTGGTAATGGGTGTTGGTACAGAGGGAGCAGTGTCTGTGAGTAGTATGAAGAAG
ATCACAAGAGTCAACAAGGAGGGGCCATATCTGGGTATAGTGGTGCCAAACTCCTATGAG
ATGGACCCTCTTCTTCAATCTCCATCCTTTGTGGCTGATGATAAGTTCCCTTACTTGGAC
TTTGCAGGGAGAAGGTTCCGAATAGGGAAGTTGGAGACCAAAAATGTTATCATTGTCATG
ACAGGATTAAGCATGCTTAATGCAGGATTAACCACACAGTTGCTGCTAAGCCTGTTTAAG
GTCAATGGCGTTCTGCATTATGGAATTGCAGGAAATGCAAATCCTAATCTTCAAATCGGA
GACGTGACGGTCCCTAAGTATTGGGCTCACACAGGCCTTTGGAATTGGCAGAGGTATGGA
GATGGGCCTGGCGATGAACTAGCCTTTGAATCCAGTGGAGACTACACCAGGAAAATCGGG
TACCTCAAATTTTCTGACTACAACAACCATACCAAAAATGGCAACTCCTCGGATAATCTT
CTGAACAACGTATGGTATCAACCCGAGGAAGTTTTTCCTGTGACAGGAACACCTGAAGTC
AGGCAGCACGCCTTCTGGGTTCCTGTTGACAAGCATTTCTACCAAGTTGCAGGGAAACTT
AAGGATTTGAAGTTGGAGGGATGCGTGAATTCTACATGTCTGCCAAGAGCTCCAATGGTG
ACGAGGGTGGAGAGAGGGGTGAGTGCCAATGTGTTTGTGGACAATGGCGCTTACAGAGAA
TTCCTATACTCCAAATTCAACGCCACCCCCGTCGACATGGAGAGCGCTGCGGTTGCTCTG
GTCTGTCTCCAACAGAAGACTCCCTTCATTGCCATTCGGGCGCTCTCTGATTTAGCTGGA
GGAGGTTCAGCTTTGTCCAATGAGGCCTCCGTCTTTTCTTCATTGGCAGCTCAAAATTCA
GTTGATGCTTTAGTCAGATTCATTGCCTTGTTGTATTCGTAATTGTTTGCTGCTTTGTAC
TCTTATTGAATAATCCCCTCAATGCATCTGCC