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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g03480.t01
CDS Infomation

cds chromosome:12X:11:2840913:2842962:-1 gene:VIT_11s0016g03480 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:F6HH05]
Sequence

ATGGGGAGTTTTCAAGTTTTGTTTGTAGCTCTATTAGTCACTGCAGTTGCATTTGAACAA
AGCTTCGTTGACGCCAACTTTTCCAAGAGCATGTATTTCAACTGGGGTGCTAGCCATTCC
TCAATTCTGGGAAATGGCGACGATCTTCAACTTGTGTTGGATTCAACTTCAGGTTCTGGT
GTTCAAACAAAGAGAGCGTTCCTATTTGGAAGTATTGAAATGCTGATCAAGTTGGTACCT
GGGAATTCTGCTGGCACAGTAACTGCATACTACCTGTCCTCTACAGGAAGCAAGCATGAT
GAGATCGACTTTGAGTTCTTAGGGAACGTATCTGGACAACCTTACACCATCCACACGAAT
ATCTATACGCAAGGAAATGGAAGCAGAGAACAACAGTTCTACCTCTGGTTTGATCCAACC
GCTGATTTCCACAACTACACCATACACTGGAACCCCACTGAAGTAGTGTGGTACATTGAT
AGCATACCAATTCGAGTTTTCCGGAACTACGAGAATGAAGGAATTGCTTACCCCAGCAAA
CAAGGTATGAGGGTTTACTCCAGTATATGGAATGCTGATAACTGGGCAACTAGAGGTGGG
CTTGTTAAAATCGACTGGTATAGTGCGCCCTTTGTAGCCAGATTCCGCCATTTCAGGGCA
AGGGCTTGCAAGTGGAATGGACCAGTCAGCATTGATCAATGTGCCTCCAAATCCCCTGCT
AACTGGTGGACTTCTCCAGTATACAGCCAGTTGAGTTATGCTAAGAAGGGTCAGATGAAG
TGGGTCAGAGATAACCATATGATCTATGATTACTGCAAAGATACAAAGAGATTCCAAGGA
AATATGCCTCCTGAATGTTTTAAGCCACAATTCTAA

Peptide Sequence

PEP ID

VIT_11s0016g03480.t01
PEP Infomation

pep chromosome:12X:11:2840913:2842962:-1 gene:VIT_11s0016g03480 transcript:VIT_11s0016g03480.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:F6HH05]
Sequence

MGSFQVLFVALLVTAVAFEQSFVDANFSKSMYFNWGASHSSILGNGDDLQLVLDSTSGSG
VQTKRAFLFGSIEMLIKLVPGNSAGTVTAYYLSSTGSKHDEIDFEFLGNVSGQPYTIHTN
IYTQGNGSREQQFYLWFDPTADFHNYTIHWNPTEVVWYIDSIPIRVFRNYENEGIAYPSK
QGMRVYSSIWNADNWATRGGLVKIDWYSAPFVARFRHFRARACKWNGPVSIDQCASKSPA
NWWTSPVYSQLSYAKKGQMKWVRDNHMIYDYCKDTKRFQGNMPPECFKPQF

Transcript Sequence

Transcript ID

VIT_11s0016g03480.t01
Transcript Infomation

cdna chromosome:12X:11:2840913:2842962:-1 gene:VIT_11s0016g03480 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:F6HH05]
Sequence

AGAAAGAGAAGTGTCCCTTGGGGCAGCAATGGGGAGTTTTCAAGTTTTGTTTGTAGCTCT
ATTAGTCACTGCAGTTGCATTTGAACAAAGCTTCGTTGACGCCAACTTTTCCAAGAGCAT
GTATTTCAACTGGGGTGCTAGCCATTCCTCAATTCTGGGAAATGGCGACGATCTTCAACT
TGTGTTGGATTCAACTTCAGGTTCTGGTGTTCAAACAAAGAGAGCGTTCCTATTTGGAAG
TATTGAAATGCTGATCAAGTTGGTACCTGGGAATTCTGCTGGCACAGTAACTGCATACTA
CCTGTCCTCTACAGGAAGCAAGCATGATGAGATCGACTTTGAGTTCTTAGGGAACGTATC
TGGACAACCTTACACCATCCACACGAATATCTATACGCAAGGAAATGGAAGCAGAGAACA
ACAGTTCTACCTCTGGTTTGATCCAACCGCTGATTTCCACAACTACACCATACACTGGAA
CCCCACTGAAGTAGTGTGGTACATTGATAGCATACCAATTCGAGTTTTCCGGAACTACGA
GAATGAAGGAATTGCTTACCCCAGCAAACAAGGTATGAGGGTTTACTCCAGTATATGGAA
TGCTGATAACTGGGCAACTAGAGGTGGGCTTGTTAAAATCGACTGGTATAGTGCGCCCTT
TGTAGCCAGATTCCGCCATTTCAGGGCAAGGGCTTGCAAGTGGAATGGACCAGTCAGCAT
TGATCAATGTGCCTCCAAATCCCCTGCTAACTGGTGGACTTCTCCAGTATACAGCCAGTT
GAGTTATGCTAAGAAGGGTCAGATGAAGTGGGTCAGAGATAACCATATGATCTATGATTA
CTGCAAAGATACAAAGAGATTCCAAGGAAATATGCCTCCTGAATGTTTTAAGCCACAATT
CTAA