Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g03450.t01
CDS Infomation

cds chromosome:12X:11:2814931:2821375:1 gene:VIT_11s0016g03450 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACAACAACGAGCAGGCTGAAAAGGCATCTGGGGCTAATAAGAGGAAGAGAAAGCGG
AAAGAGATTGCTCCCTTCGGCAATTACAGAAACTACTACGGCTATCGTATTGGCCAGGAG
TTTGAGGAAGACCCTCGGCTAAAGGTTTTAAAGAAGGAATGGTTCGAAGGCAAGGATTGT
CTTGACATTGGATGCAATAATGGGTTGATAACCATCGCTATTGCAAAAAAGTTCCATTGC
CAGAGCATCCTTGGAATTGACATTGATCCTGATCGAGTTGAGGATGCGCATTGGAATCTC
AGAAAAATTTTGAGGAAGGAAAGTGCTGGTAAGATGCATTTGAATACATCCAAAATAGAG
GCTGTGGAGAGAGCAAATGGTTTACATGATTGTACATCTGCATCATCAAATGAGCAGACA
AAAGATATTTCAAGGGATTTCTCTACTTGTAAGGAAAAAGATCTATCAGATATAGTGTCT
TTTCAACAAGAGAATTTTGTGCAGAGTTGGCGTCCACGACAGGACAAGTCTTACCATACA
ATTCTTTGTTTGAGTGTAACGAAATGGATTCATCTGAACTGGGGGGATGATGGATTGATT
ACTTTATTTGTTAAGATATGGAAGCTTCTTCATCCGGGTGGCATTCTTGTTTTGGAACCT
CAACCATGGAGCTCATATGCAAAAAACCGACTTGTGTCTGAGCGGACAGCAGCCAATTAT
TCTGAGATAATATTCTTTCCAAATTATTTTCAGGAAATACTCTTAGATAAGGTTGGATTT
AGAAAGGTAGAAAATTTAACTTCCAGCCTGTCAGGCAGCAAAACTGGATTCAACAGACCG
ATTTTGGCATTTCAGAAATGA

Peptide Sequence

PEP ID

VIT_11s0016g03450.t01
PEP Infomation

pep chromosome:12X:11:2814931:2821375:1 gene:VIT_11s0016g03450 transcript:VIT_11s0016g03450.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDNNEQAEKASGANKRKRKRKEIAPFGNYRNYYGYRIGQEFEEDPRLKVLKKEWFEGKDC
LDIGCNNGLITIAIAKKFHCQSILGIDIDPDRVEDAHWNLRKILRKESAGKMHLNTSKIE
AVERANGLHDCTSASSNEQTKDISRDFSTCKEKDLSDIVSFQQENFVQSWRPRQDKSYHT
ILCLSVTKWIHLNWGDDGLITLFVKIWKLLHPGGILVLEPQPWSSYAKNRLVSERTAANY
SEIIFFPNYFQEILLDKVGFRKVENLTSSLSGSKTGFNRPILAFQK

Transcript Sequence

Transcript ID

VIT_11s0016g03450.t01
Transcript Infomation

cdna chromosome:12X:11:2814931:2821375:1 gene:VIT_11s0016g03450 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTCAAAACCGCCCAGCTATTTCACTGTAATTTTCTCTCATTTTCTCTCCTTTCCTTGCTT
CCATACAACCGGAAGGGAGGAAAAATGGACAACAACGAGCAGGCTGAAAAGGCATCTGGG
GCTAATAAGAGGAAGAGAAAGCGGAAAGAGATTGCTCCCTTCGGCAATTACAGAAACTAC
TACGGCTATCGTATTGGCCAGGAGTTTGAGGAAGACCCTCGGCTAAAGGTTTTAAAGAAG
GAATGGTTCGAAGGCAAGGATTGTCTTGACATTGGATGCAATAATGGGTTGATAACCATC
GCTATTGCAAAAAAGTTCCATTGCCAGAGCATCCTTGGAATTGACATTGATCCTGATCGA
GTTGAGGATGCGCATTGGAATCTCAGAAAAATTTTGAGGAAGGAAAGTGCTGGTAAGATG
CATTTGAATACATCCAAAATAGAGGCTGTGGAGAGAGCAAATGGTTTACATGATTGTACA
TCTGCATCATCAAATGAGCAGACAAAAGATATTTCAAGGGATTTCTCTACTTGTAAGGAA
AAAGATCTATCAGATATAGTGTCTTTTCAACAAGAGAATTTTGTGCAGAGTTGGCGTCCA
CGACAGGACAAGTCTTACCATACAATTCTTTGTTTGAGTGTAACGAAATGGATTCATCTG
AACTGGGGGGATGATGGATTGATTACTTTATTTGTTAAGATATGGAAGCTTCTTCATCCG
GGTGGCATTCTTGTTTTGGAACCTCAACCATGGAGCTCATATGCAAAAAACCGACTTGTG
TCTGAGCGGACAGCAGCCAATTATTCTGAGATAATATTCTTTCCAAATTATTTTCAGGAA
ATACTCTTAGATAAGGTTGGATTTAGAAAGGTAGAAAATTTAACTTCCAGCCTGTCAGGC
AGCAAAACTGGATTCAACAGACCGATTTTGGCATTTCAGAAATGAGTTCACCTAGCACAA
GCAGCTTATCTATTAAACTGATGCCTCTTGATCCTTGGTACCTAAATTTTCATCAACTGA
AAGTCGTTGTGGACATTTCTTTGTTTGTTGGACAAAGAACTAAGAACACAGAACTTTGGG
GTTGAAAAATCTCAGAGTGTGACAGTGTGGCTCTGCAAGTGTGGATCTTTTGTGGGGCTG
GATATAAGTTAAAGCTTGATTCTTGAGTTGGGAGGGAAATAGAACTGTATCAATCGATAC
AGTAAAGGCCTATATTTTGAAATTATACTAAACGTATTCTTTTGTA