Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g03420.t01
CDS Infomation

cds chromosome:12X:11:2778391:2787457:1 gene:VIT_11s0016g03420 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCACTTCCAATCCACCCATTTCTTGGGTTCATCTCAGATTTCAACCAGAACACCTCT
CTAATTTTACATGTCTTGGTGGAATGCTTGTCGGGTAAGCGTGGAATTCTGGGCAAGTCT
CGAGCTTCTGTCTTGGCGATGAATCGGTGGAGTTCGATTATCTGGTTTCTGCTTTCTGGG
TTATTGTTCAATGTTGAATCACAGGCTGCCCCAGGACAGGAGAACTTCTCTTCACAAGAT
GCTGTTACTGCTTTTAAACCAAGCCTTGCTGTGGTGATTGGAATCCTGGCTGTGATGTTT
TTGTTAACATTTATTCTTCTTGTGTATGCAAAACTCTGTCACAGGGCGTCGAACAGTGAT
CGGGAAAATCAGCAGGGGCTTACCAGATCAGAGTCTCGGTTTTCTGGAATCGACAAAACT
GTAATTGAGTCACTTCCTTTCTTCAGATTCTGTTCGCTTAAAGGGTCAAAGGAAGGGCTT
GAATGTGCAGTCTGCCTATCAAAATTTGAAGACATAGAAATTCTCAGGCTGTTGCCTAAG
TGCAAACATGCCTTCCACATTGACTGTGTTGATCAGTGGCTTGAGAAGCATTCAAGCTGC
CCTCTTTGTAGGCACAAGGTCAGCGCCGAGGACCTTGCAATCTTAACGTATTCGAATAGT
TTGAGGTTCTTATGGAACCAGTCTGAGCTAAGAGAGAACTCAAATTTGGAGCTCTTTGTT
CAAAGAGAGGAAGATCATCATGGGTCTTCCAGGTTCAGCATTGGAAGCAGCTTTAGGAAG
GTTGAAAAGGGTGTGAAGGAAGAAGAATCAGTACTAATCCAAGAAGAAGAAGATGATAAT
GATGATGAAAAAATCTTGCACAAAATCAATCACAAGATTATTGTATCCGATGTTGTCCTC
AAGAACAGATGGAGCAGTGTGAGCTCTTCAGACTTGATGTATCTGAATTCAGAACTGGTT
CATGCCATGTCAAGCGATAGATTTGCTTCTTTGGATTCAAACAACTCCGCAATGGGAAGA
CCAATTGAGGACTGGGAAGTCATGAAGATCAAGGAGGAAATAGAGAGGAAGAGAATTTTC
GAAAGCAGGGTCAGTAGAATCAACCATAGCAACCCAGTTTCATCTTCAGGCCTTCCTTCT
ACTTCAAAAACTGAAGCAAACTCAGGTCATGCTTCACGCTTCTTGCATCCCACCGAAAAG
AGATCAATGTCAGAGATCACAGCTTGTTCAAGATACGCAGATTTCAGTACAAAGAATAGA
ATTAGGGAGTCTTCTTTAGCTCAAAATAACATAAAGGAGGAGAGAATGAGGCGGCTTTGG
TTGCCAATTGCAAGAAGAACAGTTGAATGGTTTGCCAATAGAGAAGGGTCTCAACAGTCT
CAAAACACAAAACAGGCACCAGATGTATGA

Peptide Sequence

PEP ID

VIT_11s0016g03420.t01
PEP Infomation

pep chromosome:12X:11:2778391:2787457:1 gene:VIT_11s0016g03420 transcript:VIT_11s0016g03420.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPLPIHPFLGFISDFNQNTSLILHVLVECLSGKRGILGKSRASVLAMNRWSSIIWFLLSG
LLFNVESQAAPGQENFSSQDAVTAFKPSLAVVIGILAVMFLLTFILLVYAKLCHRASNSD
RENQQGLTRSESRFSGIDKTVIESLPFFRFCSLKGSKEGLECAVCLSKFEDIEILRLLPK
CKHAFHIDCVDQWLEKHSSCPLCRHKVSAEDLAILTYSNSLRFLWNQSELRENSNLELFV
QREEDHHGSSRFSIGSSFRKVEKGVKEEESVLIQEEEDDNDDEKILHKINHKIIVSDVVL
KNRWSSVSSSDLMYLNSELVHAMSSDRFASLDSNNSAMGRPIEDWEVMKIKEEIERKRIF
ESRVSRINHSNPVSSSGLPSTSKTEANSGHASRFLHPTEKRSMSEITACSRYADFSTKNR
IRESSLAQNNIKEERMRRLWLPIARRTVEWFANREGSQQSQNTKQAPDV

Transcript Sequence

Transcript ID

VIT_11s0016g03420.t01
Transcript Infomation

cdna chromosome:12X:11:2778391:2787457:1 gene:VIT_11s0016g03420 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCACTTCCAATCCACCCATTTCTTGGGTTCATCTCAGATTTCAACCAGAACACCTCT
CTAATTTTACATGTCTTGGTGGAATGCTTGTCGGGTAAGCGTGGAATTCTGGGCAAGTCT
CGAGCTTCTGTCTTGGCGATGAATCGGTGGAGTTCGATTATCTGGTTTCTGCTTTCTGGG
TTATTGTTCAATGTTGAATCACAGGCTGCCCCAGGACAGGAGAACTTCTCTTCACAAGAT
GCTGTTACTGCTTTTAAACCAAGCCTTGCTGTGGTGATTGGAATCCTGGCTGTGATGTTT
TTGTTAACATTTATTCTTCTTGTGTATGCAAAACTCTGTCACAGGGCGTCGAACAGTGAT
CGGGAAAATCAGCAGGGGCTTACCAGATCAGAGTCTCGGTTTTCTGGAATCGACAAAACT
GTAATTGAGTCACTTCCTTTCTTCAGATTCTGTTCGCTTAAAGGGTCAAAGGAAGGGCTT
GAATGTGCAGTCTGCCTATCAAAATTTGAAGACATAGAAATTCTCAGGCTGTTGCCTAAG
TGCAAACATGCCTTCCACATTGACTGTGTTGATCAGTGGCTTGAGAAGCATTCAAGCTGC
CCTCTTTGTAGGCACAAGGTCAGCGCCGAGGACCTTGCAATCTTAACGTATTCGAATAGT
TTGAGGTTCTTATGGAACCAGTCTGAGCTAAGAGAGAACTCAAATTTGGAGCTCTTTGTT
CAAAGAGAGGAAGATCATCATGGGTCTTCCAGGTTCAGCATTGGAAGCAGCTTTAGGAAG
GTTGAAAAGGGTGTGAAGGAAGAAGAATCAGTACTAATCCAAGAAGAAGAAGATGATAAT
GATGATGAAAAAATCTTGCACAAAATCAATCACAAGATTATTGTATCCGATGTTGTCCTC
AAGAACAGATGGAGCAGTGTGAGCTCTTCAGACTTGATGTATCTGAATTCAGAACTGGTT
CATGCCATGTCAAGCGATAGATTTGCTTCTTTGGATTCAAACAACTCCGCAATGGGAAGA
CCAATTGAGGACTGGGAAGTCATGAAGATCAAGGAGGAAATAGAGAGGAAGAGAATTTTC
GAAAGCAGGGTCAGTAGAATCAACCATAGCAACCCAGTTTCATCTTCAGGCCTTCCTTCT
ACTTCAAAAACTGAAGCAAACTCAGGTCATGCTTCACGCTTCTTGCATCCCACCGAAAAG
AGATCAATGTCAGAGATCACAGCTTGTTCAAGATACGCAGATTTCAGTACAAAGAATAGA
ATTAGGGAGTCTTCTTTAGCTCAAAATAACATAAAGGAGGAGAGAATGAGGCGGCTTTGG
TTGCCAATTGCAAGAAGAACAGTTGAATGGTTTGCCAATAGAGAAGGGTCTCAACAGTCT
CAAAACACAAAACAGGCACCAGATGTATGAATCCAACCCAGAAATAGCTCTCAGAAGTTT
CTCATTTCCTGCCATTTTTGCATATTTTGCAGTTTCTGAACATTGTTACCCGAAAATTGG
ATAGGAATCCATGGAAACAATTTACAAGAAATATAAGAACTACTCAATTCTTCATTGCAG
ATTTGTATTCTACCAGATTACCAAAAGAAAATGTTATCCTGTTGATTGTTTTATTCAGAT
ATCTCCTGCATATGCTCAATAAATAAATGCATGATTACATTATTAACAAAGGAGATTGAA
CAACAAGGAACTACTTGCCACCCTGGTTCTATGAATCAAGCAATTAACCCTTTTCTTTTT
GAGGATTCTCTGAGTGGGAGACCCAATGAATCAAGTTGTGAGAATCTCTACTTGCCATCC
ACAAACCTCTGACAGATATTAAAAAAATAGTATGATAAAAAAATATGATAAGAGATCCTT
AAGGCTCCTGACTACTTCAAGAAACATTACTTTCATAAAGCATGCCCCCATTTGAAAGAG
GACAAAAATTTCCAGCCAACCCCATCTGGGTATCACTGGATGGGTATGTTCATACCCATC
CAATCTCTAGAATTTCTCTAGTATGTGCCCCTTAAAGTCTTTCATGGGCCACACCTGAGG
TTCATGAGATTGTCATATTATTATTCACATATCTTGGAATCACAAGATGGGTGTTTCTAG
TTAAATTTTTAATTTATTTTTGATAAACTACCATTCATTTTAAAACTTTTTAACCTATGA
AGAATAAGTCATTATCAAAATATGTTATTTAAGCTTAATTTCCTTGCCTTTTAAGTCTTC
AGCTAACAGATTGAAGTTATTTAACAAATCTAAAGATTTCTTTTTCCTCTTGATTTGATT
TTAAACATCACTTTGAATGCCTAGAGAACTCCAAAAAGGCACAAACAACAAATATGTCAT
TTTGTTACAAAGTCAATGATCACAAATCAATCCAAGCTTTTGATATTCTGACAGCAAGGA
AAGTTCCCTATATTGACCTGATTGCAATTATTGAAGTAATACACAGCTCAATTCGACAGT
TCCTGAAAAAGTAAGTACATGCCAATCTCTTCGTCTATGATTGATAATACAAACAAAACA
AAAAAAAAATGAAAAGTGGTTTGGCAAAGGAAATATGGTTATTTAAAGCCACCACTGCCA
ATGTTTTTGGAGAACCAGAATTTCATTTTTGGAAAAAATAAAAGTGGACCATTAAATCAT
TTACATATTTATGCATTTACAAAAGCAGAAAAAAGACATTAAAATCTTAAAAATTTATTA
ACTGACCTCCCCCATTGAGCTGCTTAAATGGCCAGTTGGGCTAAAAGAGAATTTCCAATG
CTGTTCTGTACATCATGCGAAGGAGAATCATGGGGTTGAGAGAGAATTCTGTTCTGCAAC
TCACTCACTTTCTCCATCTTGTGTTGTAAGTTCAGGGTGCATATTAATTCAAAAATTCTC
GCATGGGAGAAAAGAAATGCAGTTGAAAAATGTTTATAACTGGTTGAAACCCCATTCCAA
GAATTCTT