Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g03410.t01
CDS Infomation

cds chromosome:12X:11:2773899:2777840:1 gene:VIT_11s0016g03410 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGATGAGAATGGACTTGAGCTTAGCCTGGGTCTATCTTGTGGTGGATCCTCTATC
AAATCAAAAGGTAAAAATGGTGTCCCATCGGATACCAGGGCAGAGGAAGTTGATAGGGGA
AACACATTAACGGATGATTTCAAAAATTTCCTTAATCCTGGCACCCAGAAACAGGACTCA
AGCACTGGTTCCCAGAGAAGTGATCCAGTGAAACCTCAGGAGAACTTCTTTAGCAACTTT
CCAAAGGCTGCTGTTGAAGCAGATGCTTCCATGAACTTGAATGGGAGAGGACTTTGGGCT
GCAAACAATAATAGGTCTCCTGAAGTTGAGGAAGAAAAAAGGCCAGAGTTAGGTAATAAA
CGTAAAATGTTATTTGATGAGGTAAACCATCAAAAGAAGCATGACAGAGAGGTGCACCAT
GCTGATTTACACGAGAAGACAAAAACGTCACACATTTCCATAACAACTGAAGACGGTTCA
ACTGCTGAAAATGAAGATGTTGCGGAGTCTGAGGTTGATGTTTCAACCTCAAGGCTGGCT
TCACACCCTGATGATGGCTCCAAACGATTCGTTGGAGCTGGTGGCTCTTCTGAGGTCGCA
AAGGAGGTTCATGGGGTTACTGATTCTAGTGCTGTAGACTTGCAAGGGCAAAAGAGGTTT
AACTTTTCATCAGAAAATGAGTTCAAGCGGAACCTGGCCTATTGTGTTCCTTTCCCAGTC
CAATCAGTAAATATCAATGTGCCTTATTCGTTACATGCAAAGGAGTCCAACCCTGTAGGT
GCACCCGGCACATCAGGCTATTCATTACCAGGTATGATGCAGGTAATGCCTCCTGCAAAT
AATGAGCGAGCAGGGATCCAGCCTGTGAACACTGGAAACCTTCCACTGATGTTTGGCTAT
TCACCTGTCCAGCTTCCAATGTTGGATAAGAACAATTCGTGGGGGGTGGCTTCTCATTCT
CAACAGTTCCACCCTCCCTATGCTGGCAAGGGTCCACCAAACTCTGATAAACATAATGAT
GGATTGAAGATATCTCAAGCTGCAGTGCAAGCAATTCCACATAATTCACCTGAAGCTTCA
CATTATGATGGGAGGGCATTAGAACTGACCAAAGGTGATGGGAAACAGCATCCCACAGAA
GAGGGCTCCTCTTGTCAAACAGAAGATGATGTGAAGGGAAACAATGTGATCTTTAGGTCA
AAGGATGGCACTGATCAAGCAATAACAGAAGTTTTCTCCTATGAAAGTTCAGCTATAAGA
CCTGGCATTGCTGCAGATATGAAATTCGGGGGATCTGGTTCCCACCCAAATCTACCATGG
GTTTCCACAACAGGTTCAAATGGTAAGACAATTTCTGGTGTTACCTATAGATATAGCAGA
GACCAAATCAGGATTGTCTGTGCTTGTCATGGGTCTCACATGTCCCCCGAAGAGTTTGTT
CAGCATGCTAGTGAAGAGCATGCCAATCCAGAGACTGGCACTGGTTTAGCACCATTTCCC
AGTAGCAATCCTGCCACTTCAGCTCAAAGTTGA

Peptide Sequence

PEP ID

VIT_11s0016g03410.t01
PEP Infomation

pep chromosome:12X:11:2773899:2777840:1 gene:VIT_11s0016g03410 transcript:VIT_11s0016g03410.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEDENGLELSLGLSCGGSSIKSKGKNGVPSDTRAEEVDRGNTLTDDFKNFLNPGTQKQDS
STGSQRSDPVKPQENFFSNFPKAAVEADASMNLNGRGLWAANNNRSPEVEEEKRPELGNK
RKMLFDEVNHQKKHDREVHHADLHEKTKTSHISITTEDGSTAENEDVAESEVDVSTSRLA
SHPDDGSKRFVGAGGSSEVAKEVHGVTDSSAVDLQGQKRFNFSSENEFKRNLAYCVPFPV
QSVNINVPYSLHAKESNPVGAPGTSGYSLPGMMQVMPPANNERAGIQPVNTGNLPLMFGY
SPVQLPMLDKNNSWGVASHSQQFHPPYAGKGPPNSDKHNDGLKISQAAVQAIPHNSPEAS
HYDGRALELTKGDGKQHPTEEGSSCQTEDDVKGNNVIFRSKDGTDQAITEVFSYESSAIR
PGIAADMKFGGSGSHPNLPWVSTTGSNGKTISGVTYRYSRDQIRIVCACHGSHMSPEEFV
QHASEEHANPETGTGLAPFPSSNPATSAQS

Transcript Sequence

Transcript ID

VIT_11s0016g03410.t01
Transcript Infomation

cdna chromosome:12X:11:2773899:2777840:1 gene:VIT_11s0016g03410 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGCTAGGTTTTTAAACAATTGTTGGAGTCTCCCGCTAGTGAAACCCAAAATCCATTGAT
TTTCTTCATCTAGGGTTTCAAGTTTGATGTGCTCCGTTGATTCAGGTGTCTATATTTGGG
ATACCATCTTAGGATCACTGTTGTGAGGATTTGCACAAGAAAAGATGTTATGAGTGAAAC
TCATTGACAAATTTTGGTTCAGTAAAATGGAAGATGAGAATGGACTTGAGCTTAGCCTGG
GTCTATCTTGTGGTGGATCCTCTATCAAATCAAAAGGTAAAAATGGTGTCCCATCGGATA
CCAGGGCAGAGGAAGTTGATAGGGGAAACACATTAACGGATGATTTCAAAAATTTCCTTA
ATCCTGGCACCCAGAAACAGGACTCAAGCACTGGTTCCCAGAGAAGTGATCCAGTGAAAC
CTCAGGAGAACTTCTTTAGCAACTTTCCAAAGGCTGCTGTTGAAGCAGATGCTTCCATGA
ACTTGAATGGGAGAGGACTTTGGGCTGCAAACAATAATAGGTCTCCTGAAGTTGAGGAAG
AAAAAAGGCCAGAGTTAGGTAATAAACGTAAAATGTTATTTGATGAGGTAAACCATCAAA
AGAAGCATGACAGAGAGGTGCACCATGCTGATTTACACGAGAAGACAAAAACGTCACACA
TTTCCATAACAACTGAAGACGGTTCAACTGCTGAAAATGAAGATGTTGCGGAGTCTGAGG
TTGATGTTTCAACCTCAAGGCTGGCTTCACACCCTGATGATGGCTCCAAACGATTCGTTG
GAGCTGGTGGCTCTTCTGAGGTCGCAAAGGAGGTTCATGGGGTTACTGATTCTAGTGCTG
TAGACTTGCAAGGGCAAAAGAGGTTTAACTTTTCATCAGAAAATGAGTTCAAGCGGAACC
TGGCCTATTGTGTTCCTTTCCCAGTCCAATCAGTAAATATCAATGTGCCTTATTCGTTAC
ATGCAAAGGAGTCCAACCCTGTAGGTGCACCCGGCACATCAGGCTATTCATTACCAGGTA
TGATGCAGGTAATGCCTCCTGCAAATAATGAGCGAGCAGGGATCCAGCCTGTGAACACTG
GAAACCTTCCACTGATGTTTGGCTATTCACCTGTCCAGCTTCCAATGTTGGATAAGAACA
ATTCGTGGGGGGTGGCTTCTCATTCTCAACAGTTCCACCCTCCCTATGCTGGCAAGGGTC
CACCAAACTCTGATAAACATAATGATGGATTGAAGATATCTCAAGCTGCAGTGCAAGCAA
TTCCACATAATTCACCTGAAGCTTCACATTATGATGGGAGGGCATTAGAACTGACCAAAG
GTGATGGGAAACAGCATCCCACAGAAGAGGGCTCCTCTTGTCAAACAGAAGATGATGTGA
AGGGAAACAATGTGATCTTTAGGTCAAAGGATGGCACTGATCAAGCAATAACAGAAGTTT
TCTCCTATGAAAGTTCAGCTATAAGACCTGGCATTGCTGCAGATATGAAATTCGGGGGAT
CTGGTTCCCACCCAAATCTACCATGGGTTTCCACAACAGGTTCAAATGGTAAGACAATTT
CTGGTGTTACCTATAGATATAGCAGAGACCAAATCAGGATTGTCTGTGCTTGTCATGGGT
CTCACATGTCCCCCGAAGAGTTTGTTCAGCATGCTAGTGAAGAGCATGCCAATCCAGAGA
CTGGCACTGGTTTAGCACCATTTCCCAGTAGCAATCCTGCCACTTCAGCTCAAAGTTGAT
TCCCTTGCAGCTATGTTCAATGAGACCAATAAATGTTGACCTATCATGCAAGGAAGAAAA
CCTGGTTATCAGGCTATGTTATTTACACCAATCGTGAGATTTCTCGTCCCTTATCTCATT
GGAGATGCTAGGATGTTATCTTTGTATCAGTTGTCTTAGCGGCACTTTCTGCAATGAATA
TTGCAGGAGTACTTAGCAATGTATAAGCATCCTAGCTTAATAGTAATGTTAAGTGCTTCA
CTGCTACCAAGCCAGATGTAGAGGGCAATGCATGTTCTCTGTACAACTGATATAATTTAA
AGTTCTTTTCCAAA