Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g03380.t01
CDS Infomation

cds chromosome:12X:11:2751985:2755238:-1 gene:VIT_11s0016g03380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACAGCTCTATTCATGAAGTTATGTCATGTTGAGTCCAGAAGACTTCTCTTCATTGTG
GGCCTAGTGGTTGCTTCTGTAATTGTGTTTCAGGTTTTTGAACTTCCCAGTATGAATACC
TTGACTCTATCACCTACTGTAAAGGGTTCAGTATCTATGATGGTTGGCGATGCCACCATT
TTGAAGAACTCAATATCGGCTAATTCTTATGTAATTCGCACAGTGGTGAATAATAGTGAT
GCTTCTGATTTGGAGGATGAAGCAGACATGGACTATCATCTTGCATCAGATGATGACGGA
GACCTTGATTATTCTGTTGAAATGCACAAAGAGAAAAACTCAGACAATGAGTTTATTCTT
GAGAAGGGTGTAGGACTTGATAAGAGCATGACAGTGAGAAATGTCAGACATACAGATAAT
AGTCCTAAAGAAAAGGCAATAGAATTCAGGCATGGTCCTCTAGAGCATTTGAAAATATCA
GACAACAATTTCAAGATAGATGATGACCGAAAGGCGAGCACCAGTTTAACAATAGGGGAA
GGTAGCAATCGGGATGGTCTTGTGTCCCTGCCACTTGTGTCACCAGGAATTTCTTCAAAG
GGTACGAGAAACCTGGATGCAGATTCTAGAACTTCTGATTTATCCACAGTGAGCAATGTT
AAACATGTCATGGAAGCCGAAAAGGACAAAAATACCAATCTATTGCAAACTGTTTCAGTT
CCTTTGGACAATAATTATACAATTGCAGACATCTCTATTACTAGAAGGAGGGGGATGAAG
CCAACAACCATATCCAAGATGAATTTGTTATTGCTTCAGAGTGCTGTTTCTTCTTATTCA
ATGAGGCCACGGTGGTCTTCTCCACGTGATCGGGAGCTTCTATCTGCAAGATCAGAAATC
CAGAATGCTCCAGTCATAAGGAACACTCCGGGACTTTATGCTTCTGTCTACCGAAATGTT
TCCATGTTTAAAAGGAGTTATGAACTGATGGAACGGGTGCTCAAAATTTATATTTATAGA
GAAGGAGAAAAGCCTATATTCCATCAGCCACGACTGAGAGGAATTTATGCCTCTGAAGGA
TGGTTCATGAAACTGATAGAGGGGAACAAACGGTTTGTGGTCAGGGACCCCAGAAAAGCT
CACTTGTTCTACGTACCCTTCAGTTCAAAAATGCTGAGGACTGTGTTTTATGAACAAAAT
TCCTCCACTCCAAGGGACCTAGAGAAATATTTCAAGAATTATGTAGGCTTGATTGCAGGA
AAATATCGTTTCTGGAACAGAACTGGAGGAGCAGATCATTTAATCGTTGCTTGTCATGAC
TGGGCACCCCGGATCACAAGGCAATGCAGCTGGAATAGCATCAGAGCTCTTTGCAATTCA
AATATTGCCAGTGGCTTCAAAATAGGCAAGGATACTACTCTTCCAGTGACATATATCCGT
AAATCTGAGGACCCTCTAAAATATCTTGGAGGAAAACCTCCTTCACAGAGACCTATTCTG
GCCTTCTTTGCTGGAAGCATGCATGGCTATCTCCGTCCAATCCTGCTACAGTACTGGGAG
AATAAAGAACAAGACATCAAAATATTTGGTCCAATGTCTCGCGATGATGGAGGCAAAAGT
AGATATCGGGATCACATGAAGAGCAGTAAGTATTGCATTTGTGCCAGGGGCTATGAAGTT
CATACACCTCGAGTTGTTGAGGCCATTTTCTATGAGTGTGTGCCAGTGATCATATCTGAC
AATTATGTGCCTCCTTTCTTTGAGATATTGAACTGGGAAGCATTTGCAGTATTCATTCTA
GAGAAAGATGTACCAAATTTGAGGAACATACTTCTCTCCATCCCAGAAGAGAAGTACCTC
CAAATGCAGATGAGAGTAAAGATGGTGCAACAGCATTTTCTTTGGCACAAAAAGCCGGTA
AAGTATGACTTATTTCACATGATACTTCACTCAGTTTGGTACAACCGAGTTTTTCAGGTA
AAGCCCAAATAA

Peptide Sequence

PEP ID

VIT_11s0016g03380.t01
PEP Infomation

pep chromosome:12X:11:2751985:2755238:-1 gene:VIT_11s0016g03380 transcript:VIT_11s0016g03380.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTALFMKLCHVESRRLLFIVGLVVASVIVFQVFELPSMNTLTLSPTVKGSVSMMVGDATI
LKNSISANSYVIRTVVNNSDASDLEDEADMDYHLASDDDGDLDYSVEMHKEKNSDNEFIL
EKGVGLDKSMTVRNVRHTDNSPKEKAIEFRHGPLEHLKISDNNFKIDDDRKASTSLTIGE
GSNRDGLVSLPLVSPGISSKGTRNLDADSRTSDLSTVSNVKHVMEAEKDKNTNLLQTVSV
PLDNNYTIADISITRRRGMKPTTISKMNLLLLQSAVSSYSMRPRWSSPRDRELLSARSEI
QNAPVIRNTPGLYASVYRNVSMFKRSYELMERVLKIYIYREGEKPIFHQPRLRGIYASEG
WFMKLIEGNKRFVVRDPRKAHLFYVPFSSKMLRTVFYEQNSSTPRDLEKYFKNYVGLIAG
KYRFWNRTGGADHLIVACHDWAPRITRQCSWNSIRALCNSNIASGFKIGKDTTLPVTYIR
KSEDPLKYLGGKPPSQRPILAFFAGSMHGYLRPILLQYWENKEQDIKIFGPMSRDDGGKS
RYRDHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEILNWEAFAVFIL
EKDVPNLRNILLSIPEEKYLQMQMRVKMVQQHFLWHKKPVKYDLFHMILHSVWYNRVFQV
KPK

Transcript Sequence

Transcript ID

VIT_11s0016g03380.t01
Transcript Infomation

cdna chromosome:12X:11:2751985:2755238:-1 gene:VIT_11s0016g03380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GATGTAATTGGTTATTTGTTGCCATTTTATGATATGGATATGACAGCTCTATTCATGAAG
TTATGTCATGTTGAGTCCAGAAGACTTCTCTTCATTGTGGGCCTAGTGGTTGCTTCTGTA
ATTGTGTTTCAGGTTTTTGAACTTCCCAGTATGAATACCTTGACTCTATCACCTACTGTA
AAGGGTTCAGTATCTATGATGGTTGGCGATGCCACCATTTTGAAGAACTCAATATCGGCT
AATTCTTATGTAATTCGCACAGTGGTGAATAATAGTGATGCTTCTGATTTGGAGGATGAA
GCAGACATGGACTATCATCTTGCATCAGATGATGACGGAGACCTTGATTATTCTGTTGAA
ATGCACAAAGAGAAAAACTCAGACAATGAGTTTATTCTTGAGAAGGGTGTAGGACTTGAT
AAGAGCATGACAGTGAGAAATGTCAGACATACAGATAATAGTCCTAAAGAAAAGGCAATA
GAATTCAGGCATGGTCCTCTAGAGCATTTGAAAATATCAGACAACAATTTCAAGATAGAT
GATGACCGAAAGGCGAGCACCAGTTTAACAATAGGGGAAGGTAGCAATCGGGATGGTCTT
GTGTCCCTGCCACTTGTGTCACCAGGAATTTCTTCAAAGGGTACGAGAAACCTGGATGCA
GATTCTAGAACTTCTGATTTATCCACAGTGAGCAATGTTAAACATGTCATGGAAGCCGAA
AAGGACAAAAATACCAATCTATTGCAAACTGTTTCAGTTCCTTTGGACAATAATTATACA
ATTGCAGACATCTCTATTACTAGAAGGAGGGGGATGAAGCCAACAACCATATCCAAGATG
AATTTGTTATTGCTTCAGAGTGCTGTTTCTTCTTATTCAATGAGGCCACGGTGGTCTTCT
CCACGTGATCGGGAGCTTCTATCTGCAAGATCAGAAATCCAGAATGCTCCAGTCATAAGG
AACACTCCGGGACTTTATGCTTCTGTCTACCGAAATGTTTCCATGTTTAAAAGGAGTTAT
GAACTGATGGAACGGGTGCTCAAAATTTATATTTATAGAGAAGGAGAAAAGCCTATATTC
CATCAGCCACGACTGAGAGGAATTTATGCCTCTGAAGGATGGTTCATGAAACTGATAGAG
GGGAACAAACGGTTTGTGGTCAGGGACCCCAGAAAAGCTCACTTGTTCTACGTACCCTTC
AGTTCAAAAATGCTGAGGACTGTGTTTTATGAACAAAATTCCTCCACTCCAAGGGACCTA
GAGAAATATTTCAAGAATTATGTAGGCTTGATTGCAGGAAAATATCGTTTCTGGAACAGA
ACTGGAGGAGCAGATCATTTAATCGTTGCTTGTCATGACTGGGCACCCCGGATCACAAGG
CAATGCAGCTGGAATAGCATCAGAGCTCTTTGCAATTCAAATATTGCCAGTGGCTTCAAA
ATAGGCAAGGATACTACTCTTCCAGTGACATATATCCGTAAATCTGAGGACCCTCTAAAA
TATCTTGGAGGAAAACCTCCTTCACAGAGACCTATTCTGGCCTTCTTTGCTGGAAGCATG
CATGGCTATCTCCGTCCAATCCTGCTACAGTACTGGGAGAATAAAGAACAAGACATCAAA
ATATTTGGTCCAATGTCTCGCGATGATGGAGGCAAAAGTAGATATCGGGATCACATGAAG
AGCAGTAAGTATTGCATTTGTGCCAGGGGCTATGAAGTTCATACACCTCGAGTTGTTGAG
GCCATTTTCTATGAGTGTGTGCCAGTGATCATATCTGACAATTATGTGCCTCCTTTCTTT
GAGATATTGAACTGGGAAGCATTTGCAGTATTCATTCTAGAGAAAGATGTACCAAATTTG
AGGAACATACTTCTCTCCATCCCAGAAGAGAAGTACCTCCAAATGCAGATGAGAGTAAAG
ATGGTGCAACAGCATTTTCTTTGGCACAAAAAGCCGGTAAAGTATGACTTATTTCACATG
ATACTTCACTCAGTTTGGTACAACCGAGTTTTTCAGGTAAAGCCCAAATAAGAGATAGAA
GAAAGCTGATCAAATGTCACAAAGGAATGGTGTTATCCATCAACTGCAAACAATCAACCG
GGAGATGGGAGGAGCAAGCAACCCAGAATTTTGCTGAAACATCATCTGTCATCCTGCCAA
TGTAAGTTGAATGAGGGTGGAGTAGTGTGTGTATAGC