Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g03370.t01
CDS Infomation

cds chromosome:12X:11:2744496:2748583:-1 gene:VIT_11s0016g03370 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTGGGGTTAGTGGCAATTACTTATTTGTTGTGTCAATCCCTGTTGCTTCCATATGGA
AATGCTCTTCTGTCTCTACTGCCTGATCGGGATGTTCCAATATATGACAATTTCAGCTCC
CCAACTAGACAATCTTCTGTCAGGTCTTTTATGGTTAACAAGTCCCTTCTTTCCAATGCT
TCAGACTTGACTGACACTTCACTGTTTGTTGAGGTGGTAGAAGATGTGGAGAAATCAAAT
GTTACGGTAGAATTTGGGGATGATAATGGAACAGAGGGAACAGATGAAGACATAGAAGAT
GGTCTTGCATTAGAGAGAGAAGACCTGGAAAACATTGTTGAATTCAATGAGGATGATAAT
GGACCAAAGGAAAAGGGTGGAGACACAGAGAATTTTGCCTCAGAGAGCAAAGGCATGGAT
CACGTTGTTGAATTTACTAAGGATAACAACATAAGTAAAGGTTTGCCATTTAAGAAAGTT
GTAGATATGGATGGGATCTCTGCATTGGAATATGTCAACAATCAAGAAAATAGTTCAGAT
CTGAAAAAGGACAGTGAAATGAGACACATCGGCTCTGCAGTGCATATTGTGAAACCACCA
AATGAGGGAATTTCAACAGACAATATTGTAAAAGCAGATGCAAGTCTAACACCAAGTACC
CCTGGAAGTCTAGGTACTACTTTCAAATCCCATTTGCTTGCATCTCCTGGAGTAGATTCA
TTATTTAACACCACCTACATCGAAAAAATGGCATCAAATGGAAACGCCTCAAACCATTTG
ACCGCCACTGACATATCTTCTGTTGGAAAGCCAGAAAAAGAAATCCTTTCTAAGGATGAA
AATCTTCTGGTGCTGCAGAGTGATCTTGCTGATTTAAACAATAATTCTGCAATGACAAGT
AATCCTGGGAGGAAAAAGATGCAGAGTGAGATGCCTCCAAAATCAGTAACATCAATATAT
GATATGAACAGAAGATTAGTTCGGCACCGTGCTTCCTCACGTGCAATGAGACCTCGTTGG
GCCTCCCCACGTGACCAGGAAATGCTGGCTGCAAAGTTACAGATTCAGAATGCTCCTAGA
GTAAAGAATGATCCAGAACTTCATGCTCCTCTTTTTCGAAATGTTTCCATGTTTAAAAGA
AGCTATGAACTCATGGAGCGCATCCTGAAAGTTTATGTCTACAAGGATGGAGAAAAACCC
ATCTTTCACCAACCAATACTCAAGGGACTATATGCCTCTGAGGGATGGTTTATGAAACTG
ATGGAGAGAAACAAGCATTTTGTTGTGAAGGACCCTCGACAGGCTCAGCTGTTTTATATG
CCTTTTAGTTCACGGATGCTGGAGTACAAACTGTATGTACGGAACTCTCACAACCGGACC
AATCTACGCCAATATTTGAAGCAGTATTCAGAAAAAATTGCTGCAAAATATCGTTTCTGG
AATAGAACTGGTGGAGCAGATCACTTTCTTGTTGCTTGCCATGATTGGGCTCCATACGAA
ACAAGACATCATATGGAACAATGCATCAAAGCCCTCTGCAATGCTGATGTAACTGCAGGC
TTCAAAATAGGCAGGGATGTGTCTCTTCCAGAAACATATGTCCGTTCCGCAAGAAATCCT
CTTCGAGATCTCGGAGGAAAACCTCCTTCTGAGAGGCACATTCTTGCCTTTTATGCTGGA
AACATGCATGGATATTTACGACCAATCTTGCTGAAGTACTGGAAGGACAAAGACCCTGAT
ATGAAGATCTATGGCCCAATGCCTCCTGGTGTTGCAAGCAAAATGAATTACATCCAGCAC
ATGAAGAGCAGCAAGTTTTGCATCTGTCCCAAGGGTTACGAGGTCAACAGCCCACGGGTG
GTTGAAGCCATCTTTTACGAGTGTGTGCCTGTGATCATATCTGACAATTTCGTGCCACCA
TTTTTCGATGTCTTAGATTGGGGAGCATTCTCAATAATACTGGCAGAGAAAGATATTCCC
AACTTGAAAGATGTTCTCCTCTCGATACCAAATGATAAGTATCTTCAAATGCAGCTTGGG
GTAAGGAAGGTTCAGAAGCATTTTCTGTGGCATGCCAAGCCCTTGAAGTATGATCTTTTC
CACATGACCCTCCATTCAATTTGGTACAACAGAGTTTTCCAGGTAAAACCTAGATGA

Peptide Sequence

PEP ID

VIT_11s0016g03370.t01
PEP Infomation

pep chromosome:12X:11:2744496:2748583:-1 gene:VIT_11s0016g03370 transcript:VIT_11s0016g03370.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVGLVAITYLLCQSLLLPYGNALLSLLPDRDVPIYDNFSSPTRQSSVRSFMVNKSLLSNA
SDLTDTSLFVEVVEDVEKSNVTVEFGDDNGTEGTDEDIEDGLALEREDLENIVEFNEDDN
GPKEKGGDTENFASESKGMDHVVEFTKDNNISKGLPFKKVVDMDGISALEYVNNQENSSD
LKKDSEMRHIGSAVHIVKPPNEGISTDNIVKADASLTPSTPGSLGTTFKSHLLASPGVDS
LFNTTYIEKMASNGNASNHLTATDISSVGKPEKEILSKDENLLVLQSDLADLNNNSAMTS
NPGRKKMQSEMPPKSVTSIYDMNRRLVRHRASSRAMRPRWASPRDQEMLAAKLQIQNAPR
VKNDPELHAPLFRNVSMFKRSYELMERILKVYVYKDGEKPIFHQPILKGLYASEGWFMKL
MERNKHFVVKDPRQAQLFYMPFSSRMLEYKLYVRNSHNRTNLRQYLKQYSEKIAAKYRFW
NRTGGADHFLVACHDWAPYETRHHMEQCIKALCNADVTAGFKIGRDVSLPETYVRSARNP
LRDLGGKPPSERHILAFYAGNMHGYLRPILLKYWKDKDPDMKIYGPMPPGVASKMNYIQH
MKSSKFCICPKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFDVLDWGAFSIILAEKDIP
NLKDVLLSIPNDKYLQMQLGVRKVQKHFLWHAKPLKYDLFHMTLHSIWYNRVFQVKPR

Transcript Sequence

Transcript ID

VIT_11s0016g03370.t01
Transcript Infomation

cdna chromosome:12X:11:2744496:2748583:-1 gene:VIT_11s0016g03370 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTGCAGATGGAGTGCACTCTTAAATTTCAAAAGTTCTGTCTGGTAGAAACCAGGAGATG
GATTTTCATGGTGGGGTTAGTGGCAATTACTTATTTGTTGTGTCAATCCCTGTTGCTTCC
ATATGGAAATGCTCTTCTGTCTCTACTGCCTGATCGGGATGTTCCAATATATGACAATTT
CAGCTCCCCAACTAGACAATCTTCTGTCAGGTCTTTTATGGTTAACAAGTCCCTTCTTTC
CAATGCTTCAGACTTGACTGACACTTCACTGTTTGTTGAGGTGGTAGAAGATGTGGAGAA
ATCAAATGTTACGGTAGAATTTGGGGATGATAATGGAACAGAGGGAACAGATGAAGACAT
AGAAGATGGTCTTGCATTAGAGAGAGAAGACCTGGAAAACATTGTTGAATTCAATGAGGA
TGATAATGGACCAAAGGAAAAGGGTGGAGACACAGAGAATTTTGCCTCAGAGAGCAAAGG
CATGGATCACGTTGTTGAATTTACTAAGGATAACAACATAAGTAAAGGTTTGCCATTTAA
GAAAGTTGTAGATATGGATGGGATCTCTGCATTGGAATATGTCAACAATCAAGAAAATAG
TTCAGATCTGAAAAAGGACAGTGAAATGAGACACATCGGCTCTGCAGTGCATATTGTGAA
ACCACCAAATGAGGGAATTTCAACAGACAATATTGTAAAAGCAGATGCAAGTCTAACACC
AAGTACCCCTGGAAGTCTAGGTACTACTTTCAAATCCCATTTGCTTGCATCTCCTGGAGT
AGATTCATTATTTAACACCACCTACATCGAAAAAATGGCATCAAATGGAAACGCCTCAAA
CCATTTGACCGCCACTGACATATCTTCTGTTGGAAAGCCAGAAAAAGAAATCCTTTCTAA
GGATGAAAATCTTCTGGTGCTGCAGAGTGATCTTGCTGATTTAAACAATAATTCTGCAAT
GACAAGTAATCCTGGGAGGAAAAAGATGCAGAGTGAGATGCCTCCAAAATCAGTAACATC
AATATATGATATGAACAGAAGATTAGTTCGGCACCGTGCTTCCTCACGTGCAATGAGACC
TCGTTGGGCCTCCCCACGTGACCAGGAAATGCTGGCTGCAAAGTTACAGATTCAGAATGC
TCCTAGAGTAAAGAATGATCCAGAACTTCATGCTCCTCTTTTTCGAAATGTTTCCATGTT
TAAAAGAAGCTATGAACTCATGGAGCGCATCCTGAAAGTTTATGTCTACAAGGATGGAGA
AAAACCCATCTTTCACCAACCAATACTCAAGGGACTATATGCCTCTGAGGGATGGTTTAT
GAAACTGATGGAGAGAAACAAGCATTTTGTTGTGAAGGACCCTCGACAGGCTCAGCTGTT
TTATATGCCTTTTAGTTCACGGATGCTGGAGTACAAACTGTATGTACGGAACTCTCACAA
CCGGACCAATCTACGCCAATATTTGAAGCAGTATTCAGAAAAAATTGCTGCAAAATATCG
TTTCTGGAATAGAACTGGTGGAGCAGATCACTTTCTTGTTGCTTGCCATGATTGGGCTCC
ATACGAAACAAGACATCATATGGAACAATGCATCAAAGCCCTCTGCAATGCTGATGTAAC
TGCAGGCTTCAAAATAGGCAGGGATGTGTCTCTTCCAGAAACATATGTCCGTTCCGCAAG
AAATCCTCTTCGAGATCTCGGAGGAAAACCTCCTTCTGAGAGGCACATTCTTGCCTTTTA
TGCTGGAAACATGCATGGATATTTACGACCAATCTTGCTGAAGTACTGGAAGGACAAAGA
CCCTGATATGAAGATCTATGGCCCAATGCCTCCTGGTGTTGCAAGCAAAATGAATTACAT
CCAGCACATGAAGAGCAGCAAGTTTTGCATCTGTCCCAAGGGTTACGAGGTCAACAGCCC
ACGGGTGGTTGAAGCCATCTTTTACGAGTGTGTGCCTGTGATCATATCTGACAATTTCGT
GCCACCATTTTTCGATGTCTTAGATTGGGGAGCATTCTCAATAATACTGGCAGAGAAAGA
TATTCCCAACTTGAAAGATGTTCTCCTCTCGATACCAAATGATAAGTATCTTCAAATGCA
GCTTGGGGTAAGGAAGGTTCAGAAGCATTTTCTGTGGCATGCCAAGCCCTTGAAGTATGA
TCTTTTCCACATGACCCTCCATTCAATTTGGTACAACAGAGTTTTCCAGGTAAAACCTAG
ATGATTTTAAGAGATCTTTTGATGGGCATATGAGATGAAGTTAAACATGAGGAGTAGAGA
CACAACTGCAAGCCTGCAGAGGAAAAACAAAAAGACTGCTGAATAAACCATTTGCCTCTC
TTTATTGTCCTCTTTTCATGGTGTACAAAGAGGCTCTGTCTGGATGTGAGAATTAACATT
ATGTTAAGGCAATTTTCTCCTTCCCTTTTGTATATA