Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g03360.t01
CDS Infomation

cds chromosome:12X:11:2736164:2743298:-1 gene:VIT_11s0016g03360 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACAATTCATGTATCAATGGGGAAATATTTGAGATCCCTTCAACAGTGGGGCATATA
TCAAGCAATTCTTACCTCTTTGAAAGACACAGATATCAAAGAAAGGATGTGGCTTCCTGT
CCTGCCATGAGGATCACAGGTCTTCAAGCTGAACATCCTAGATTTTATTTGTCAATGGAT
GACATTTTTGCCCATTTTTTGACCTTGACTTCATATATAAGACATCGATTTATTAGGTTC
ATTGAAAATCTTGTAACAAGAGATGTCAATAAATACTCTGAGGATCCAGTGATGATTTCT
TGTGGACAACACTCAAGTCGTTTTAGCTGCAATGAAGTCTGTGAAAGAAGAGCCTTTGAC
CTGAAGGAAGAATCTCATGTAAATATAAGATCCCAAATTGCAGGAAGCAATTACAGTTAT
CAGAGCACCTCCTTTCTTTTTCAAGGGTTGCTGCTCCCATTCTTTGGTATGAGACTTGCC
TGGAGGTTGGCATGGGCCTCTTCGAGATATTCTTTCTGTTTTGTGAGATGCATGCAAATT
CGAGTTCGTAGCATTATATCTCGAGTACAGACAACTCTGCATGGTTCTTCTGATGATATT
GGATGGTTGCAGTGCACTCCTGGGGTGGCTCCTGTGGAGGATGGTACAGCAAGATTCCTG
GAACTACTTCGAGAGATAAGGAATGGAAAGCACACGCTCCCAAACTCATATGTCTATCTA
CTAATTCCAGGCCTTTTTGGCAATCATGGTCCATTGTATTTTGTGAACACTAAGAAGTTC
TTTTCAAAGATGGGTCTAGCTTGCCATATTGCCAAAATTCACAGTGAGGCATCTGTAGAG
CATAATGCTTGGGAACTGAAGCAATACATTGAAGAACTTTACTGGGGATCTGGAAAGTGT
GTGATCTTGCTTGGGCACAGCAAGGGTGGGGTTGATGCAGCAGCTGCATTATCTATGTAC
TGGTCTGACTTAAAGGACAAAGTTGCTGGATTAGCTTTGGTGCAGAGCCCATACGGTGGA
ACCCCCTTAGCTTCTGATATTCTTCGTGAAGGCCAGATTGCTGACAGGGAAACCCGGAGG
ATCTTGGAGTTTTTGATATGCAAGTTAATTAAGGGTGACATTCAGGCATTGGAGGACCTC
ACATACGAGAAGAGGAGGGAGTTCATAATGAATCACAAGCTCCCTGAATGCATCCCTCTT
ATCTCCTTTCACTCTGAAGCAAGTGTGGCTCCAAGCGTCCTTGCCACAATGTCCCACGTA
GCTCATGCAGAACTTCCCTTGCTCCCCCTTCCCAGATTTGGTAGCAAAGAGTCTGATGTT
CAAGGATGCAAGGTGCCTGTAGTAATTCCTATATCCGCTGTCCTGTCTCTTTGTGCACTT
CACCTTCAACTCAGGTATGGGGAGAAGAGTGATGGGTTAGTGACATGTCGTGATGCTGAA
GTTCCAGGCTCAGTTGTTGTCAAACCAGATCTGAAGCTCGACCATGCCTGGATGGTTTAC
TTTTCAGGGAAGAAGGATCTTAGTGAGCCTGATGCTTGTGAAATGAGCGAGGCTCTTTTG
ACTCTGCTTGTGGAGCTGGGGAAGACAAAGAAAGAACAGAGGAGAGAATGA

Peptide Sequence

PEP ID

VIT_11s0016g03360.t01
PEP Infomation

pep chromosome:12X:11:2736164:2743298:-1 gene:VIT_11s0016g03360 transcript:VIT_11s0016g03360.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDNSCINGEIFEIPSTVGHISSNSYLFERHRYQRKDVASCPAMRITGLQAEHPRFYLSMD
DIFAHFLTLTSYIRHRFIRFIENLVTRDVNKYSEDPVMISCGQHSSRFSCNEVCERRAFD
LKEESHVNIRSQIAGSNYSYQSTSFLFQGLLLPFFGMRLAWRLAWASSRYSFCFVRCMQI
RVRSIISRVQTTLHGSSDDIGWLQCTPGVAPVEDGTARFLELLREIRNGKHTLPNSYVYL
LIPGLFGNHGPLYFVNTKKFFSKMGLACHIAKIHSEASVEHNAWELKQYIEELYWGSGKC
VILLGHSKGGVDAAAALSMYWSDLKDKVAGLALVQSPYGGTPLASDILREGQIADRETRR
ILEFLICKLIKGDIQALEDLTYEKRREFIMNHKLPECIPLISFHSEASVAPSVLATMSHV
AHAELPLLPLPRFGSKESDVQGCKVPVVIPISAVLSLCALHLQLRYGEKSDGLVTCRDAE
VPGSVVVKPDLKLDHAWMVYFSGKKDLSEPDACEMSEALLTLLVELGKTKKEQRRE

Transcript Sequence

Transcript ID

VIT_11s0016g03360.t01
Transcript Infomation

cdna chromosome:12X:11:2736164:2743298:-1 gene:VIT_11s0016g03360 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCATTCCCACAACGTCTCTTTTCCCATACGAGACTGGGAATGGGGCACATGTAGACTTCC
CCTTTTTCCTTCTTTAAATATGGGTTTCTTATGCTTCTGAAGAATGATCTGTTCCTGGAT
TTTGTAAATCTGGGTCTCTCCTCGATTGTTGGGCTTCTAGTGTATCTTATTAGTGACTAG
AAGAAGCAATGGACAATTCATGTATCAATGGGGAAATATTTGAGATCCCTTCAACAGTGG
GGCATATATCAAGCAATTCTTACCTCTTTGAAAGACACAGATATCAAAGAAAGGATGTGG
CTTCCTGTCCTGCCATGAGGATCACAGGTCTTCAAGCTGAACATCCTAGATTTTATTTGT
CAATGGATGACATTTTTGCCCATTTTTTGACCTTGACTTCATATATAAGACATCGATTTA
TTAGGTTCATTGAAAATCTTGTAACAAGAGATGTCAATAAATACTCTGAGGATCCAGTGA
TGATTTCTTGTGGACAACACTCAAGTCGTTTTAGCTGCAATGAAGTCTGTGAAAGAAGAG
CCTTTGACCTGAAGGAAGAATCTCATGTAAATATAAGATCCCAAATTGCAGGAAGCAATT
ACAGTTATCAGAGCACCTCCTTTCTTTTTCAAGGGTTGCTGCTCCCATTCTTTGGTATGA
GACTTGCCTGGAGGTTGGCATGGGCCTCTTCGAGATATTCTTTCTGTTTTGTGAGATGCA
TGCAAATTCGAGTTCGTAGCATTATATCTCGAGTACAGACAACTCTGCATGGTTCTTCTG
ATGATATTGGATGGTTGCAGTGCACTCCTGGGGTGGCTCCTGTGGAGGATGGTACAGCAA
GATTCCTGGAACTACTTCGAGAGATAAGGAATGGAAAGCACACGCTCCCAAACTCATATG
TCTATCTACTAATTCCAGGCCTTTTTGGCAATCATGGTCCATTGTATTTTGTGAACACTA
AGAAGTTCTTTTCAAAGATGGGTCTAGCTTGCCATATTGCCAAAATTCACAGTGAGGCAT
CTGTAGAGCATAATGCTTGGGAACTGAAGCAATACATTGAAGAACTTTACTGGGGATCTG
GAAAGTGTGTGATCTTGCTTGGGCACAGCAAGGGTGGGGTTGATGCAGCAGCTGCATTAT
CTATGTACTGGTCTGACTTAAAGGACAAAGTTGCTGGATTAGCTTTGGTGCAGAGCCCAT
ACGGTGGAACCCCCTTAGCTTCTGATATTCTTCGTGAAGGCCAGATTGCTGACAGGGAAA
CCCGGAGGATCTTGGAGTTTTTGATATGCAAGTTAATTAAGGGTGACATTCAGGCATTGG
AGGACCTCACATACGAGAAGAGGAGGGAGTTCATAATGAATCACAAGCTCCCTGAATGCA
TCCCTCTTATCTCCTTTCACTCTGAAGCAAGTGTGGCTCCAAGCGTCCTTGCCACAATGT
CCCACGTAGCTCATGCAGAACTTCCCTTGCTCCCCCTTCCCAGATTTGGTAGCAAAGAGT
CTGATGTTCAAGGATGCAAGGTGCCTGTAGTAATTCCTATATCCGCTGTCCTGTCTCTTT
GTGCACTTCACCTTCAACTCAGGTATGGGGAGAAGAGTGATGGGTTAGTGACATGTCGTG
ATGCTGAAGTTCCAGGCTCAGTTGTTGTCAAACCAGATCTGAAGCTCGACCATGCCTGGA
TGGTTTACTTTTCAGGGAAGAAGGATCTTAGTGAGCCTGATGCTTGTGAAATGAGCGAGG
CTCTTTTGACTCTGCTTGTGGAGCTGGGGAAGACAAAGAAAGAACAGAGGAGAGAATGAG
GAAG