Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g03340.t01
CDS Infomation

cds chromosome:12X:11:2709081:2712593:1 gene:VIT_11s0016g03340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGCCTACGCCTAGGCTTCGCGAGGCCATCGACGCGCTGTACAGTCGCGGCACTGCG
AACTCCGAATCCTACACTCGTCTTCTGCTCCAATGTGTTAGATCAAACGACGTTGTTCAA
GCCAAGAGACTCCAGACCCACATGGATCTTCATCTCTACCAACCCACCGACACCTTCCTT
CAGAACCGCCTTCTTCACCTCTACGCTAAATCTGGGAACCTGTCCGATGCTCGAGACCTG
TTCGATAAAATGTCTCGCAGAGATGTTTTCTCCTGGAATGCTATGCTTTCTGCTTACTCA
AAGTCAGGCAATGTGGAGGATTTGCGGGCAGTGTTTGATCAAATGAGTGTTCATGATGCT
GTTTCGTATAATACAGTAATTGCAGGTTTTTCTGGAAATGGCTGTTCAAGTCAGGCTCTG
GAGTTTTTTGTTAGAATGCAGGAAGAAGGATTTGAGTCCACAGATTATACCCATGTGAGT
GTGCTACATGCATGCTCACAGTTATTGGATATTAAGCGGGGAAAACAAATTCATGGTAGG
ATTGTTGCAACTAGTTTGGGGGAAAGCGTTTTTGTTTGGAATGCTTTAACCAATATGTAT
GCCAAGTGTGGTGCACTTGATCAGGCTAGGTGGTTGTTTGATCGAATGGTTAACAAGAAT
GTAGTATCATGGAATTCAATGATATCTGGTTATTTACAAAATGGGCAACCTGAGACATGC
ACCAAGTTGTTTTGTGAAATGCAGTCATCGGGTCTGATGCCTGACCAGGTTACAATTTCA
AATATTCTCAGTGCCTACTTTCAATGTGGCTATATAGATGAAGCATGTAAGACTTTTAGA
GAGATTAAAGAGAAGGATAAGGTTTGTTGGACAACAATGATGGTGGGTTGTGCGCAGAAT
GGAAAAGAAGAAGATGCTTTGCTGTTATTTAGAGAGATGCTATTGGAAAATGTCAGACCA
GACAATTTTACCATATCAAGTGTGGTTAGTTCCTGTGCAAGACTAGCTTCTTTATGTCAA
GGTCAGGCAGTTCATGGAAAAGCAGTTATTTTTGGCGTTGATCATGATTTGCTTGTGTCT
AGTGCCCTTGTTGATATGTATTCCAAGTGTGGAGAAACTGCAGATGCTTGGATTGTGTTC
AAAAGGATGTTAACTAGGAATGTGATTTCTTGGAATTCCATGATTTTGGGTTATGCACAA
AATGGAAAGGATCTAGAGGCCTTGGCTCTTTATGAAGAAATGTTGCATGAAAACTTGAAG
CCAGATAATATTACTTTTGTGGGTGTTTTGTCTGCTTGTATGCATGCTGGTTTAGTTGAA
CGTGGACAGGGATACTTTTATTCTATCAGCAAAATTCATGGGATGAACCCTACTTTTGAT
CATTATTCATGTATGATCAATCTCCTTGGTCGTGCAGGTTACATGGATAAAGCAGTAGAT
CTGATTAAAAGTATGACCTTTGAACCTAATTGCTTAATTTGGTCTACCCTTTTATCTGTT
TGTAGAATTAACTGTGATGTCAACAATGGAGAGATGGCAGCAAGGCATCTCTTTGAATTA
GACCCACACAATGCTGGACCGTATATTATGCTTTCTAACATTTACGCTGCTTGTGGGAGA
TGGAAAGATGTGGCAGCAGTAAGATCTCTCATGAAGAACAACAAAATTAAAAAATTTGCT
GCCTATAGCTGGATTGAGATTGACAACCAGGTCCACAAGTTCGTAGCAGAAGATCGAACT
CATTCTGAAACAGAACAAATTTATGAAGAGCTGAACAGACTAATAAAAAAGCTGCAGGAA
TCTGGATTTACACCTGATACTAACTTGGTTCTACATGATGTGGTAGAGGAGGAGAAGTTT
GATTCCATCTGTTACCACAGTGAGAAACTTGCTCTTGCATTTTGGTTGATCAAAAAGCCT
CATGGAAGGACACCCATAAGGATTATGAAGAACATTCGTGTTTGTGGTGACTGCCATGTG
TTTATGAAGTTTGTATCTAAGATTATTAGGCGGCCGATAATCTTGAGAGATATAAACAGA
TTCCATCATTTTATCGAAGGGAGGTGCTCCTGCAAAGACAGTTGGTAA

Peptide Sequence

PEP ID

VIT_11s0016g03340.t01
PEP Infomation

pep chromosome:12X:11:2709081:2712593:1 gene:VIT_11s0016g03340 transcript:VIT_11s0016g03340.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKPTPRLREAIDALYSRGTANSESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFL
QNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDA
VSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGR
IVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETC
TKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQN
GKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVS
SALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLK
PDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVD
LIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGR
WKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKKLQE
SGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTPIRIMKNIRVCGDCHV
FMKFVSKIIRRPIILRDINRFHHFIEGRCSCKDSW

Transcript Sequence

Transcript ID

VIT_11s0016g03340.t01
Transcript Infomation

cdna chromosome:12X:11:2709081:2712593:1 gene:VIT_11s0016g03340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGCCTACGCCTAGGCTTCGCGAGGCCATCGACGCGCTGTACAGTCGCGGCACTGCG
AACTCCGAATCCTACACTCGTCTTCTGCTCCAATGTGTTAGATCAAACGACGTTGTTCAA
GCCAAGAGACTCCAGACCCACATGGATCTTCATCTCTACCAACCCACCGACACCTTCCTT
CAGAACCGCCTTCTTCACCTCTACGCTAAATCTGGGAACCTGTCCGATGCTCGAGACCTG
TTCGATAAAATGTCTCGCAGAGATGTTTTCTCCTGGAATGCTATGCTTTCTGCTTACTCA
AAGTCAGGCAATGTGGAGGATTTGCGGGCAGTGTTTGATCAAATGAGTGTTCATGATGCT
GTTTCGTATAATACAGTAATTGCAGGTTTTTCTGGAAATGGCTGTTCAAGTCAGGCTCTG
GAGTTTTTTGTTAGAATGCAGGAAGAAGGATTTGAGTCCACAGATTATACCCATGTGAGT
GTGCTACATGCATGCTCACAGTTATTGGATATTAAGCGGGGAAAACAAATTCATGGTAGG
ATTGTTGCAACTAGTTTGGGGGAAAGCGTTTTTGTTTGGAATGCTTTAACCAATATGTAT
GCCAAGTGTGGTGCACTTGATCAGGCTAGGTGGTTGTTTGATCGAATGGTTAACAAGAAT
GTAGTATCATGGAATTCAATGATATCTGGTTATTTACAAAATGGGCAACCTGAGACATGC
ACCAAGTTGTTTTGTGAAATGCAGTCATCGGGTCTGATGCCTGACCAGGTTACAATTTCA
AATATTCTCAGTGCCTACTTTCAATGTGGCTATATAGATGAAGCATGTAAGACTTTTAGA
GAGATTAAAGAGAAGGATAAGGTTTGTTGGACAACAATGATGGTGGGTTGTGCGCAGAAT
GGAAAAGAAGAAGATGCTTTGCTGTTATTTAGAGAGATGCTATTGGAAAATGTCAGACCA
GACAATTTTACCATATCAAGTGTGGTTAGTTCCTGTGCAAGACTAGCTTCTTTATGTCAA
GGTCAGGCAGTTCATGGAAAAGCAGTTATTTTTGGCGTTGATCATGATTTGCTTGTGTCT
AGTGCCCTTGTTGATATGTATTCCAAGTGTGGAGAAACTGCAGATGCTTGGATTGTGTTC
AAAAGGATGTTAACTAGGAATGTGATTTCTTGGAATTCCATGATTTTGGGTTATGCACAA
AATGGAAAGGATCTAGAGGCCTTGGCTCTTTATGAAGAAATGTTGCATGAAAACTTGAAG
CCAGATAATATTACTTTTGTGGGTGTTTTGTCTGCTTGTATGCATGCTGGTTTAGTTGAA
CGTGGACAGGGATACTTTTATTCTATCAGCAAAATTCATGGGATGAACCCTACTTTTGAT
CATTATTCATGTATGATCAATCTCCTTGGTCGTGCAGGTTACATGGATAAAGCAGTAGAT
CTGATTAAAAGTATGACCTTTGAACCTAATTGCTTAATTTGGTCTACCCTTTTATCTGTT
TGTAGAATTAACTGTGATGTCAACAATGGAGAGATGGCAGCAAGGCATCTCTTTGAATTA
GACCCACACAATGCTGGACCGTATATTATGCTTTCTAACATTTACGCTGCTTGTGGGAGA
TGGAAAGATGTGGCAGCAGTAAGATCTCTCATGAAGAACAACAAAATTAAAAAATTTGCT
GCCTATAGCTGGATTGAGATTGACAACCAGGTCCACAAGTTCGTAGCAGAAGATCGAACT
CATTCTGAAACAGAACAAATTTATGAAGAGCTGAACAGACTAATAAAAAAGCTGCAGGAA
TCTGGATTTACACCTGATACTAACTTGGTTCTACATGATGTGGTAGAGGAGGAGAAGTTT
GATTCCATCTGTTACCACAGTGAGAAACTTGCTCTTGCATTTTGGTTGATCAAAAAGCCT
CATGGAAGGACACCCATAAGGATTATGAAGAACATTCGTGTTTGTGGTGACTGCCATGTG
TTTATGAAGTTTGTATCTAAGATTATTAGGCGGCCGATAATCTTGAGAGATATAAACAGA
TTCCATCATTTTATCGAAGGGAGGTGCTCCTGCAAAGACAGTTGGTAAT