Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g03320.t01
CDS Infomation

cds chromosome:12X:11:2676751:2693341:1 gene:VIT_11s0016g03320 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGCTTCGGAGGACTCCAACCAATCGAAGATTCGGGCTGTCTTTGGGAGTGTTCTC
TCGTTCTTTATTCTCATTCTGATCGGAGTTCTCGCATTCTCGATCCGTCTATTCTCCGTT
ATAAAGTATGAGAGTGTTATTCACGAGTTCGATCCTTATTTCAATTATAGAGTCACTCAG
TTTCTCACAAAGAACGGAATATATGACTTTTGGAACTGGTTTGATGATCGAACCTGGTAT
CCTCTTGGTCGTGTGATTGGTGGCACTGTTTACCCAGGATTGACCTTAACAGCAGGCTCC
ATATGGTGGTTATTGAATTCCTTGAATATTCCTCTATCTGTTGAAACTGTCTGTGTGTTT
ACTGCACCTATATTTTCTGCTAATGCTGCATGGGCAACTTATCTTCTGACCAAGGAAGTT
AAGGGCACTGGTGCTGGACTCACAGCTGCAGCTCTTCTGGCCATGGTACCATCATACATA
TCCCGATCTGTGGCTGGTAGCTATGATAATGAAGCTGTGGCTATATTTGCTCTGATCTTC
ACTTTCTATCTTTATATTAAGACGCTAAATACAGGATCCCTCTTTTATGCTACTTTGAAT
GCCATAACATACTTCTACATGGTTTGCTCTTGGGGAGGATACACTTTTATTATCAACCTT
ATTCCAATGCATGTGCTTCTTTGCATAGTAACTGGTCGCTATTCTTCTCGACTTTACATT
GCGTATGCTCCTCTTGTTGTGTTGGGAACATTGTTAGCAGCTTTGGTGCCTGTTGTTGGT
TTCAATGCAGTAATGACATCAGAACATTTTGCATCATTTCTGGTTTTCATTATCATCCAT
GTGGTAGCTCTTGTGTATTATATCAAAGGAATTCTATCTCCAAAAATGTTTAAAGTAGCT
GTTACGCTTGTTGTATCCGTTGGCCTGGTGGTGTGTTGTGCTGTGGTAGCAGTACTTATA
GCACTGGTAGCTTCCAGCCCAACAAAGGGATGGAGTGGACGAAGTTTGAGTCTCCTTGAT
CCAACTTATGCAAGCAAGTATATACCAATTATTGCCAGTGTTAGTGAACATCAACCACCT
ACTTGGCCATCTTACTTTATGGACATTAATGTTTTGGCATTTTTGGTTCCAGCTGGCATT
GTTGCATGCTTTTTGCCACTATCTGATGCAAGCTCCTTTGTTGTTCTTTACATAGTGACA
TCTGTATATTTTTCTGGAGTCATGGTGCGCCTTATGCTTGTACTAGCTCCTGCAGCATGC
ATATTATCTGGAATTGCTCTTTCTGAAGCATTTGATGTTCTTACTCGATCGATCAAATTT
CAGTTACCTGGATTATCAGAAAATTCCCAGATTGATGCAGGGGATACTACCTCTAGTAGT
GTTGTGACACAAAATGATGCAGCCAAGACCAATAAAAATGAAGACACACTAAAGGAGCGA
CCCTCGAGAAAGAACAGGAAGAAGGAAAAGGAACATGTGGAAAAGACTTCCATTAAGTCT
CAAATTAAAAAGAGGCTACTGGTTTTACCTCTGGAGGCATCTGTTGCTGCTATTTTCTTG
CTTGTATTGCTGGGTGCCTTCTATGTGGTTCATTGTGTTTGGGCAGCTGCGGAAGCTTAC
TCAGCCCCTTCTATTGTTTTAACATCTCATTCTCATGATGGCCTTCACGTTTTTGATGAT
TTTAGAGAGGCTTATGCATGGTTACGACACAATACTGAGGTGGATGATAAAGTTGCATCT
TGGTGGGACTATGGTTACCAAACTACTGCTATGGCTAACCGGACTGTTATTGTGGACAAT
AATACCTGGAATAACACTCATATTGCAACTGTTGGCACTGCCATGTCTTCTCCTGAAAAG
GCAGCTTGGGAAATTTTTAACTCCTTGGATGTAAAATATGTTCTTGTTGTCTTCGGAGGT
CTTGTTGGATATCCGAGTGATGACATTAATAAGTTCCTGTGGATGGTTCGCATAGGAGGG
GGGGTATTCCCCCACATCAGGGAACCTGATTATCTGAGAGATGGACAGTACCGGATTGAT
TCTCAAGCCACTCCTACCATGCTAAATTGCCTCATGTACAAACTGTCATATTTCAGATTT
GTGGAGACAGATGGTAAAGGCTTTGATCGAGTAAGGCGGACTGAAATTGGGAAGAAATAT
TTCAAACTCACCCATTTTGAGGAGGTGTTCACTACTCACCATTGGATGGTTCGGATATAC
AAACTAAAGCCTCCGAAGAACAGGATCCGTGTAAAAACAAAGAAATCAAAATCGAAAGCA
AGCTCCACAACCAGCTCAAAAAGAAGTGGAAAAAGAAAGAAGAATCCCTGGCAATGA

Peptide Sequence

PEP ID

VIT_11s0016g03320.t01
PEP Infomation

pep chromosome:12X:11:2676751:2693341:1 gene:VIT_11s0016g03320 transcript:VIT_11s0016g03320.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAASEDSNQSKIRAVFGSVLSFFILILIGVLAFSIRLFSVIKYESVIHEFDPYFNYRVTQ
FLTKNGIYDFWNWFDDRTWYPLGRVIGGTVYPGLTLTAGSIWWLLNSLNIPLSVETVCVF
TAPIFSANAAWATYLLTKEVKGTGAGLTAAALLAMVPSYISRSVAGSYDNEAVAIFALIF
TFYLYIKTLNTGSLFYATLNAITYFYMVCSWGGYTFIINLIPMHVLLCIVTGRYSSRLYI
AYAPLVVLGTLLAALVPVVGFNAVMTSEHFASFLVFIIIHVVALVYYIKGILSPKMFKVA
VTLVVSVGLVVCCAVVAVLIALVASSPTKGWSGRSLSLLDPTYASKYIPIIASVSEHQPP
TWPSYFMDINVLAFLVPAGIVACFLPLSDASSFVVLYIVTSVYFSGVMVRLMLVLAPAAC
ILSGIALSEAFDVLTRSIKFQLPGLSENSQIDAGDTTSSSVVTQNDAAKTNKNEDTLKER
PSRKNRKKEKEHVEKTSIKSQIKKRLLVLPLEASVAAIFLLVLLGAFYVVHCVWAAAEAY
SAPSIVLTSHSHDGLHVFDDFREAYAWLRHNTEVDDKVASWWDYGYQTTAMANRTVIVDN
NTWNNTHIATVGTAMSSPEKAAWEIFNSLDVKYVLVVFGGLVGYPSDDINKFLWMVRIGG
GVFPHIREPDYLRDGQYRIDSQATPTMLNCLMYKLSYFRFVETDGKGFDRVRRTEIGKKY
FKLTHFEEVFTTHHWMVRIYKLKPPKNRIRVKTKKSKSKASSTTSSKRSGKRKKNPWQ

Transcript Sequence

Transcript ID

VIT_11s0016g03320.t01
Transcript Infomation

cdna chromosome:12X:11:2676751:2693341:1 gene:VIT_11s0016g03320 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCTCTCATTTCCTCACTGCAATTCGGAGCTTGACTCGGCCGTCGATGGCGGCTTCGGAGG
ACTCCAACCAATCGAAGATTCGGGCTGTCTTTGGGAGTGTTCTCTCGTTCTTTATTCTCA
TTCTGATCGGAGTTCTCGCATTCTCGATCCGTCTATTCTCCGTTATAAAGTATGAGAGTG
TTATTCACGAGTTCGATCCTTATTTCAATTATAGAGTCACTCAGTTTCTCACAAAGAACG
GAATATATGACTTTTGGAACTGGTTTGATGATCGAACCTGGTATCCTCTTGGTCGTGTGA
TTGGTGGCACTGTTTACCCAGGATTGACCTTAACAGCAGGCTCCATATGGTGGTTATTGA
ATTCCTTGAATATTCCTCTATCTGTTGAAACTGTCTGTGTGTTTACTGCACCTATATTTT
CTGCTAATGCTGCATGGGCAACTTATCTTCTGACCAAGGAAGTTAAGGGCACTGGTGCTG
GACTCACAGCTGCAGCTCTTCTGGCCATGGTACCATCATACATATCCCGATCTGTGGCTG
GTAGCTATGATAATGAAGCTGTGGCTATATTTGCTCTGATCTTCACTTTCTATCTTTATA
TTAAGACGCTAAATACAGGATCCCTCTTTTATGCTACTTTGAATGCCATAACATACTTCT
ACATGGTTTGCTCTTGGGGAGGATACACTTTTATTATCAACCTTATTCCAATGCATGTGC
TTCTTTGCATAGTAACTGGTCGCTATTCTTCTCGACTTTACATTGCGTATGCTCCTCTTG
TTGTGTTGGGAACATTGTTAGCAGCTTTGGTGCCTGTTGTTGGTTTCAATGCAGTAATGA
CATCAGAACATTTTGCATCATTTCTGGTTTTCATTATCATCCATGTGGTAGCTCTTGTGT
ATTATATCAAAGGAATTCTATCTCCAAAAATGTTTAAAGTAGCTGTTACGCTTGTTGTAT
CCGTTGGCCTGGTGGTGTGTTGTGCTGTGGTAGCAGTACTTATAGCACTGGTAGCTTCCA
GCCCAACAAAGGGATGGAGTGGACGAAGTTTGAGTCTCCTTGATCCAACTTATGCAAGCA
AGTATATACCAATTATTGCCAGTGTTAGTGAACATCAACCACCTACTTGGCCATCTTACT
TTATGGACATTAATGTTTTGGCATTTTTGGTTCCAGCTGGCATTGTTGCATGCTTTTTGC
CACTATCTGATGCAAGCTCCTTTGTTGTTCTTTACATAGTGACATCTGTATATTTTTCTG
GAGTCATGGTGCGCCTTATGCTTGTACTAGCTCCTGCAGCATGCATATTATCTGGAATTG
CTCTTTCTGAAGCATTTGATGTTCTTACTCGATCGATCAAATTTCAGTTACCTGGATTAT
CAGAAAATTCCCAGATTGATGCAGGGGATACTACCTCTAGTAGTGTTGTGACACAAAATG
ATGCAGCCAAGACCAATAAAAATGAAGACACACTAAAGGAGCGACCCTCGAGAAAGAACA
GGAAGAAGGAAAAGGAACATGTGGAAAAGACTTCCATTAAGTCTCAAATTAAAAAGAGGC
TACTGGTTTTACCTCTGGAGGCATCTGTTGCTGCTATTTTCTTGCTTGTATTGCTGGGTG
CCTTCTATGTGGTTCATTGTGTTTGGGCAGCTGCGGAAGCTTACTCAGCCCCTTCTATTG
TTTTAACATCTCATTCTCATGATGGCCTTCACGTTTTTGATGATTTTAGAGAGGCTTATG
CATGGTTACGACACAATACTGAGGTGGATGATAAAGTTGCATCTTGGTGGGACTATGGTT
ACCAAACTACTGCTATGGCTAACCGGACTGTTATTGTGGACAATAATACCTGGAATAACA
CTCATATTGCAACTGTTGGCACTGCCATGTCTTCTCCTGAAAAGGCAGCTTGGGAAATTT
TTAACTCCTTGGATGTAAAATATGTTCTTGTTGTCTTCGGAGGTCTTGTTGGATATCCGA
GTGATGACATTAATAAGTTCCTGTGGATGGTTCGCATAGGAGGGGGGGTATTCCCCCACA
TCAGGGAACCTGATTATCTGAGAGATGGACAGTACCGGATTGATTCTCAAGCCACTCCTA
CCATGCTAAATTGCCTCATGTACAAACTGTCATATTTCAGATTTGTGGAGACAGATGGTA
AAGGCTTTGATCGAGTAAGGCGGACTGAAATTGGGAAGAAATATTTCAAACTCACCCATT
TTGAGGAGGTGTTCACTACTCACCATTGGATGGTTCGGATATACAAACTAAAGCCTCCGA
AGAACAGGATCCGTGTAAAAACAAAGAAATCAAAATCGAAAGCAAGCTCCACAACCAGCT
CAAAAAGAAGTGGAAAAAGAAAGAAGAATCCCTGGCAATGAAAGGCACTTTCAGAAGCTG
CTGTCTCCAATTAGTTACTTGGAACCCACATATTTAATATGCTTGAGCCCCTAGAGAGCT
AGTGCACCAGCATTATTAGCCATTTTTCTTATAGAAAAGCAAACGTATCAATCAAAGATT
TTGTAGTCTTTTCCCATCGTGAACTTTTTTGGCTCGCACCCTTAACATATGACGAAAGAA
TGCATTGATCAATTTTGGAACAGTTCCTTTGGCTTGGTTCCACGTGTAACGATGAGTGGG
CATATTATATACAGCCTAT