Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g03290.t01
CDS Infomation

cds chromosome:12X:11:2664871:2666837:-1 gene:VIT_11s0016g03290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGCGTTGAAGGAGCTTCTGCCTGCTGTGAAATCAACGACTACGACGTACTACGAC
CACTCCAATGATCCGTGGTTCAAACAGAGGTTCAGTTCGGCGGAGGCGGAGGCGGCCTCT
GTCATTAAGCCCAATCCTGTCCCGCCGTATTTGAAGCGGGCAGGTTTTGTTCCGCGAAAG
CTCGAGGATTTTGGAGATGGTGGGGCCTTTCCGGAGATTCATATTGCCCAATACCCTCTT
GATATGGGGAGGGATAAAACTGCAAAGCCCGGATCCAAGATACTACCGGTGACTGTTGAT
TCACGTGGCAATGTGGCGTATGATGCTATTGTCAGGCTAAATGAGAATGCCTCCAAGATT
GTGTATTCACAGCATAAGGATCTTGTGCCCAAGATATTGACTGAGGAAGAGATAGAGGAA
GATGAAGAGGAATTGGAGAAGATCGAGGAAACAATGCAGGAAACTAAAGCAGCACTTGAG
AAGATCGTGAATGTGAGGTTGAGTGCTGCGCAGCCCAAGAATGTCCCAACGCAATCCACT
GACTCAAAGTTTATAAAGTATAAGCCATCACAGCAGTCTGCAGCCTTTAATTCAGGTGCG
AAGGAGAGGATTATAAGGATGGTGGAAATGCCAGTGGACCCACTTGAGCCTCCGAAGTTT
AAGCATAAGAGGGTGCCGAAGGCTTCAGGGTCACCACCTGTTCCTGTTATGCATTCTCCA
CCACGGCCAGTAACAGTGAAAGATCAGCAGGATTGGAAAATCCCACCTTGTATTTCGAAT
TGGAAGAACCCAAAAGGGTACACAATTCCACTCGATAAACGTTTAGCTGCTGATGGGAGG
GGACTTCAGGAGGTTCAGATTAATGATAACTTTGCTAAGCTTTCTGAAGCATTATATGTT
GCAGAGCAGAAGGCTAGAGAAGCAGTGGCAATGAGATCCAAGGTTCAAAAGGAGATGCTT
ATGAAGGAAAAGGAAAGGAAAGAGCAGGAGTTGCGGGCCTTGGCACAGAAAGCGCGCTCT
GAAAGAACTGGTGTGCCACCCCCAGCTGCTGCTCCCATGCCTTCTGAGAAGAGCATGATG
GATAGCGGTGACATGCGAGGGGATTATGATCGTGTGAGGGAGAAAGAGAGGGATTTCCCA
AAGGAGACAAGGGAGGAAAGAGAGGAGAGATTGCAGAGGGAGAAAATTCGTGAGGAGCGT
CGGCGAGAGAGAGAAAGGGAGAGAAGATTGGAGGCAAAAGATGCTGCAATGGGAAAGAAA
AGCAAGATCACGAGAGACAGAGATCGTGATATTAGTGAGAAGATTAGTCTTGGCATGGCT
TCTACTGGTGCAGGAAGAGGGGGTGAAGTTATGTATGACCAAAGGCTGTTCAACCAGGAG
AAAGGAATGGACTCTGGATTTGCCACTGATGATCAGTACAATGTGTATGACAAGGGATTG
TTCACTGCACAGAATACACTTTCTAGCTTGTACAGGCCAAAGAAGGATGCTGATAGTGAC
ATCTATGGAGGTGCGGATGAACAGCTGGAGAAGATTATGAAAACCGAACGCTTCAAACCT
GACAAGGGTTTTGCTGGTGCTTCTGAGAGAGCGGGTCCAAGAGACAGGCCAGTTGAATTT
GAAAAGGAGGCAGAAGAAGCTGATCCATTTGGACTGGATCAGTTCTTGACTGAAGTGAAA
AAAGGTAAGAAAGCAATGGATAAAGTTGGTACTGGAGGGACTATGAGAGCCAGTGCAGGA
TCTTCGATGCGGGATGGCCATGATGGAGGCTCTGGTAGGACGCGGATTGGCTTTGAAAGG
GGACGATAA

Peptide Sequence

PEP ID

VIT_11s0016g03290.t01
PEP Infomation

pep chromosome:12X:11:2664871:2666837:-1 gene:VIT_11s0016g03290 transcript:VIT_11s0016g03290.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAALKELLPAVKSTTTTYYDHSNDPWFKQRFSSAEAEAASVIKPNPVPPYLKRAGFVPRK
LEDFGDGGAFPEIHIAQYPLDMGRDKTAKPGSKILPVTVDSRGNVAYDAIVRLNENASKI
VYSQHKDLVPKILTEEEIEEDEEELEKIEETMQETKAALEKIVNVRLSAAQPKNVPTQST
DSKFIKYKPSQQSAAFNSGAKERIIRMVEMPVDPLEPPKFKHKRVPKASGSPPVPVMHSP
PRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLSEALYV
AEQKAREAVAMRSKVQKEMLMKEKERKEQELRALAQKARSERTGVPPPAAAPMPSEKSMM
DSGDMRGDYDRVREKERDFPKETREEREERLQREKIREERRRERERERRLEAKDAAMGKK
SKITRDRDRDISEKISLGMASTGAGRGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGL
FTAQNTLSSLYRPKKDADSDIYGGADEQLEKIMKTERFKPDKGFAGASERAGPRDRPVEF
EKEAEEADPFGLDQFLTEVKKGKKAMDKVGTGGTMRASAGSSMRDGHDGGSGRTRIGFER
GR

Transcript Sequence

Transcript ID

VIT_11s0016g03290.t01
Transcript Infomation

cdna chromosome:12X:11:2664871:2666837:-1 gene:VIT_11s0016g03290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCATGGCGGCGTTGAAGGAGCTTCTGCCTGCTGTGAAATCAACGACTACGACGTACTACG
ACCACTCCAATGATCCGTGGTTCAAACAGAGGTTCAGTTCGGCGGAGGCGGAGGCGGCCT
CTGTCATTAAGCCCAATCCTGTCCCGCCGTATTTGAAGCGGGCAGGTTTTGTTCCGCGAA
AGCTCGAGGATTTTGGAGATGGTGGGGCCTTTCCGGAGATTCATATTGCCCAATACCCTC
TTGATATGGGGAGGGATAAAACTGCAAAGCCCGGATCCAAGATACTACCGGTGACTGTTG
ATTCACGTGGCAATGTGGCGTATGATGCTATTGTCAGGCTAAATGAGAATGCCTCCAAGA
TTGTGTATTCACAGCATAAGGATCTTGTGCCCAAGATATTGACTGAGGAAGAGATAGAGG
AAGATGAAGAGGAATTGGAGAAGATCGAGGAAACAATGCAGGAAACTAAAGCAGCACTTG
AGAAGATCGTGAATGTGAGGTTGAGTGCTGCGCAGCCCAAGAATGTCCCAACGCAATCCA
CTGACTCAAAGTTTATAAAGTATAAGCCATCACAGCAGTCTGCAGCCTTTAATTCAGGTG
CGAAGGAGAGGATTATAAGGATGGTGGAAATGCCAGTGGACCCACTTGAGCCTCCGAAGT
TTAAGCATAAGAGGGTGCCGAAGGCTTCAGGGTCACCACCTGTTCCTGTTATGCATTCTC
CACCACGGCCAGTAACAGTGAAAGATCAGCAGGATTGGAAAATCCCACCTTGTATTTCGA
ATTGGAAGAACCCAAAAGGGTACACAATTCCACTCGATAAACGTTTAGCTGCTGATGGGA
GGGGACTTCAGGAGGTTCAGATTAATGATAACTTTGCTAAGCTTTCTGAAGCATTATATG
TTGCAGAGCAGAAGGCTAGAGAAGCAGTGGCAATGAGATCCAAGGTTCAAAAGGAGATGC
TTATGAAGGAAAAGGAAAGGAAAGAGCAGGAGTTGCGGGCCTTGGCACAGAAAGCGCGCT
CTGAAAGAACTGGTGTGCCACCCCCAGCTGCTGCTCCCATGCCTTCTGAGAAGAGCATGA
TGGATAGCGGTGACATGCGAGGGGATTATGATCGTGTGAGGGAGAAAGAGAGGGATTTCC
CAAAGGAGACAAGGGAGGAAAGAGAGGAGAGATTGCAGAGGGAGAAAATTCGTGAGGAGC
GTCGGCGAGAGAGAGAAAGGGAGAGAAGATTGGAGGCAAAAGATGCTGCAATGGGAAAGA
AAAGCAAGATCACGAGAGACAGAGATCGTGATATTAGTGAGAAGATTAGTCTTGGCATGG
CTTCTACTGGTGCAGGAAGAGGGGGTGAAGTTATGTATGACCAAAGGCTGTTCAACCAGG
AGAAAGGAATGGACTCTGGATTTGCCACTGATGATCAGTACAATGTGTATGACAAGGGAT
TGTTCACTGCACAGAATACACTTTCTAGCTTGTACAGGCCAAAGAAGGATGCTGATAGTG
ACATCTATGGAGGTGCGGATGAACAGCTGGAGAAGATTATGAAAACCGAACGCTTCAAAC
CTGACAAGGGTTTTGCTGGTGCTTCTGAGAGAGCGGGTCCAAGAGACAGGCCAGTTGAAT
TTGAAAAGGAGGCAGAAGAAGCTGATCCATTTGGACTGGATCAGTTCTTGACTGAAGTGA
AAAAAGGTAAGAAAGCAATGGATAAAGTTGGTACTGGAGGGACTATGAGAGCCAGTGCAG
GATCTTCGATGCGGGATGGCCATGATGGAGGCTCTGGTAGGACGCGGATTGGCTTTGAAA
GGGGACGATAAAATAGCCCCTTCATCAGGTTTATTTTCTATCATAGCATGAGTCTGTGGC
TGTTCCTAGACTTTTATGGCTGAAAATCTGTTGCTTGAGCTTGAAACTCAGAACCTTAAA
AATATGTTTGTACTTTGATTCGCTTATTTGTATTTTTGTTCAGAAAA