Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g03280.t01
CDS Infomation

cds chromosome:12X:11:2659289:2663368:1 gene:VIT_11s0016g03280 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACGATTATACAGATCAGGAGAAAATGGAGGAATCGGCGATCCAGTACGATGGCTCC
TCTACGGTTCTCGACCTCACTAGTTATCAGCTCCACAGTCTTGAATCCATTGATATCCCT
TTCAATTTGACTGAGCTAGATCTAACTGCCAATCGCTTGACGGTCTTGGATTCTCGCATT
GGCCTTCTTTCCAACCTCAAAAAGCTCTCTCTGCGCCAAAACCTTCTCGATGACGCTGGC
GTTGACATGATCTCCGGCTGGGATGCCATTTCGGGCCTCGAAGAGTTAGTGCTCAGAGAT
AACAAGCTAACTAAAATACCCGATGTCAGCATATTTAAGAAACTTTTGGTGTTTGATGTT
TCTTTCAATGAAATTTCTTCATTGAATGGACTGGCCAAGGTCTCCAACACACTCAAGGAG
CTATATGTTTCAAAAAATGAAGTGACTACGATGGAAGAGATTGACCACTTTCATGAACTG
CAGATTCTTGAACTTGGTTCCAACAGATTACGGGTAATGGAGAATTTGCAAACTTTAACA
AAATTAAAGGAGCTGTGGCTGGGTCGAAACCGGATCAGAGTAGTAAATCTTTGTGGGCTG
AAATGCATTGAAAAGATTAGCTTGCAGAGCAATCGTTTAACTTCTATGAAAGGGTTTGAA
GATTGTGTTGCTTTGGAAGAACTCTACTTGAGTCATAATGGTATAGCAAAAATGGAAGGC
CTGTCAACCTTAGTGAATCTCCGTGTTTTGGATGCATCGTCAAATAAGCTAACAGCAGTG
GATGACATCGAAAATCTTACCCAGTTAGAAGATTTGTGGCTCAATGATAACCAAATAACG
TCTCTTGAAGGCATTGCTGAGGCTGTGGCTGGTTCAAGGGAGAAGCTCACCACTATCTAC
CTTGAGAACAATCCATGCGCAAAAAATTCTCCAAACTACTCTGCTACTCTGAAACAAATC
TTCCCTAATCTTCAGCAGATTGATTCAGCTGTATTTGGTTAG

Peptide Sequence

PEP ID

VIT_11s0016g03280.t01
PEP Infomation

pep chromosome:12X:11:2659289:2663368:1 gene:VIT_11s0016g03280 transcript:VIT_11s0016g03280.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDDYTDQEKMEESAIQYDGSSTVLDLTSYQLHSLESIDIPFNLTELDLTANRLTVLDSRI
GLLSNLKKLSLRQNLLDDAGVDMISGWDAISGLEELVLRDNKLTKIPDVSIFKKLLVFDV
SFNEISSLNGLAKVSNTLKELYVSKNEVTTMEEIDHFHELQILELGSNRLRVMENLQTLT
KLKELWLGRNRIRVVNLCGLKCIEKISLQSNRLTSMKGFEDCVALEELYLSHNGIAKMEG
LSTLVNLRVLDASSNKLTAVDDIENLTQLEDLWLNDNQITSLEGIAEAVAGSREKLTTIY
LENNPCAKNSPNYSATLKQIFPNLQQIDSAVFG

Transcript Sequence

Transcript ID

VIT_11s0016g03280.t01
Transcript Infomation

cdna chromosome:12X:11:2659289:2663368:1 gene:VIT_11s0016g03280 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGAAGCATCTTTCAGTCTTGAAAGTTCCATTCCCCTCTTCCCACAGTGACGCTTTGAACA
TTTCGAGGGTTCCATTCGGCAATGGACGATTATACAGATCAGGAGAAAATGGAGGAATCG
GCGATCCAGTACGATGGCTCCTCTACGGTTCTCGACCTCACTAGTTATCAGCTCCACAGT
CTTGAATCCATTGATATCCCTTTCAATTTGACTGAGCTAGATCTAACTGCCAATCGCTTG
ACGGTCTTGGATTCTCGCATTGGCCTTCTTTCCAACCTCAAAAAGCTCTCTCTGCGCCAA
AACCTTCTCGATGACGCTGGCGTTGACATGATCTCCGGCTGGGATGCCATTTCGGGCCTC
GAAGAGTTAGTGCTCAGAGATAACAAGCTAACTAAAATACCCGATGTCAGCATATTTAAG
AAACTTTTGGTGTTTGATGTTTCTTTCAATGAAATTTCTTCATTGAATGGACTGGCCAAG
GTCTCCAACACACTCAAGGAGCTATATGTTTCAAAAAATGAAGTGACTACGATGGAAGAG
ATTGACCACTTTCATGAACTGCAGATTCTTGAACTTGGTTCCAACAGATTACGGGTAATG
GAGAATTTGCAAACTTTAACAAAATTAAAGGAGCTGTGGCTGGGTCGAAACCGGATCAGA
GTAGTAAATCTTTGTGGGCTGAAATGCATTGAAAAGATTAGCTTGCAGAGCAATCGTTTA
ACTTCTATGAAAGGGTTTGAAGATTGTGTTGCTTTGGAAGAACTCTACTTGAGTCATAAT
GGTATAGCAAAAATGGAAGGCCTGTCAACCTTAGTGAATCTCCGTGTTTTGGATGCATCG
TCAAATAAGCTAACAGCAGTGGATGACATCGAAAATCTTACCCAGTTAGAAGATTTGTGG
CTCAATGATAACCAAATAACGTCTCTTGAAGGCATTGCTGAGGCTGTGGCTGGTTCAAGG
GAGAAGCTCACCACTATCTACCTTGAGAACAATCCATGCGCAAAAAATTCTCCAAACTAC
TCTGCTACTCTGAAACAAATCTTCCCTAATCTTCAGCAGATTGATTCAGCTGTATTTGGT
TAGAAGTTCCTGTGGCTCTATATTTTAATCTTGTCTGAAGACATCTGAAGCTGAAAGCCC
CAGAAAGCTGTCGTTTATATGAATGGCAAATTTGTAGTTCAGGAGGTAGCTGAAGGTATG
GTAGCTGTGAGGTAGCTGAATGAATGTTAGCCGTTTCAGAGGAAACTGTTGACAGGAGGC
TGGAGCAATGAAGTCTAAATTGCCCAAGCATGGGATACTGATTAATAAAGAGTTATCCTA
ACATAAATTTTGAATAATAAGTATTATTAGATTCCCTTTCAATGTTGTTTCTTCTCCTTG
AAACACTTTTTGGGCTGGAGATATGCATAGTGCCTTTTGAAGCAGCTTCTCTTCTTCTGT
TGGTCAAGTTCTAGCGGAGTTTTCAGGATAGAGGAATGTTCTAAACTTCTACGCATGAGT
TTCGTGTCAATTTTATTTTTGTGGGGTTTAAGATGATTTTTATTTTTATTTTATAATTTA
AATGAGTTCTCCTTGT