Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g03270.t01
CDS Infomation

cds chromosome:12X:11:2656152:2657426:-1 gene:VIT_11s0016g03270 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTCGAGCCGGTGTGTCTCCGGACTCTTACACAATTCCTATAGTTTTAAAGGCCGTG
TGTCAAGCTTTTGCAACTGGATTTGGCAGGCAGGTTCATTCTGTTGCTATCCGGCATGGT
CTTGAATTGAATGAGTATTGTGAGAGTGGGTTCATAAGCGTGTACTCCAAAGCGGGTGAA
TTCCAAAATGCGCACAAGGTGTTTGAACAAAATCGTTTTAGGAAGTTGGGTTCTTGGAAT
GCTATCATCGGAGGCCTTTCCCAAGGCGGGCGTGCTAAGGAAGCTGTGACCATGTTCATG
GAGATGAGGAAATGTGGGTTCGAACCTGATGAAGTGACTATGGTGAGTGTGACATCGGCT
TGTGGAAGCTTAGGGCACTTGGACCTGGCACTTCAATTGCATAAATGCGTCTACCAAGCT
AAAACATCGGAGAGGTCGGATACTTTGACGTTGAATTCGCTTGTAGACATGTATGGAAAA
TGCGGACGGATGGACTTAGCTTACAGGGTATTTTCGAGGATGGATGAGCCAAATGTGTCG
TCGTGGACATCCATGATCGTGGGCTATGCGATGCACGGGCAGTTGTATGATGCCCTGGAA
TGCTTCAGGTGCATGAGAGAAGCAGGAGTGAGGCCTAACCATGTGACGTTTATTGGGGTG
CTGAGCGCATGTGTGCATGGCGGGGCAGTGCAAGAGGGAAAGTACTACTTCGACATGATG
ACGACCGCTTACGGGCTAGTGCCCAGGATGCAGCACTATGGGTGCATGGTAGATCTGCTC
GGACGGGCGGGGCTGCTGGAGGAGGCAAGAAAGATGGTGGAGAGGATGCCGATGAAGGCG
AATGTAATAGTTTGGGGGTGTTTGATGGGGGCCTGTGAGAAGTACGGGAATGTGAAGATG
GGGGAGTGGGTGGCCGAGCATTTGCTAGAGCTGGAGCCCTGGAATGATGGGGTGTTTGTG
GTTTTATCTAATATTTATGCCAGCAGAGGTTTGTGGAGAGAGGTTGAGAGGGTAAGAGGG
GTTATGAAGGAGAGAAAACTTGACAAGGTTCCTGCTTATAGCTTGGCAACGAATGCAGAC
TAA

Peptide Sequence

PEP ID

VIT_11s0016g03270.t01
PEP Infomation

pep chromosome:12X:11:2656152:2657426:-1 gene:VIT_11s0016g03270 transcript:VIT_11s0016g03270.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSRAGVSPDSYTIPIVLKAVCQAFATGFGRQVHSVAIRHGLELNEYCESGFISVYSKAGE
FQNAHKVFEQNRFRKLGSWNAIIGGLSQGGRAKEAVTMFMEMRKCGFEPDEVTMVSVTSA
CGSLGHLDLALQLHKCVYQAKTSERSDTLTLNSLVDMYGKCGRMDLAYRVFSRMDEPNVS
SWTSMIVGYAMHGQLYDALECFRCMREAGVRPNHVTFIGVLSACVHGGAVQEGKYYFDMM
TTAYGLVPRMQHYGCMVDLLGRAGLLEEARKMVERMPMKANVIVWGCLMGACEKYGNVKM
GEWVAEHLLELEPWNDGVFVVLSNIYASRGLWREVERVRGVMKERKLDKVPAYSLATNAD

Transcript Sequence

Transcript ID

VIT_11s0016g03270.t01
Transcript Infomation

cdna chromosome:12X:11:2656152:2657426:-1 gene:VIT_11s0016g03270 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGCCCATATAATCCGAACCCACTTCCTAGAATTGTACCCTGCCCCATTTCAGTGGAACAA
CATCATCAGATCCTACACTAGGCTTGAGGCTCATCACTATGCGCTAAGCATTTATATTGC
CATGTCTCGAGCCGGTGTGTCTCCGGACTCTTACACAATTCCTATAGTTTTAAAGGCCGT
GTGTCAAGCTTTTGCAACTGGATTTGGCAGGCAGGTTCATTCTGTTGCTATCCGGCATGG
TCTTGAATTGAATGAGTATTGTGAGAGTGGGTTCATAAGCGTGTACTCCAAAGCGGGTGA
ATTCCAAAATGCGCACAAGGTGTTTGAACAAAATCGTTTTAGGAAGTTGGGTTCTTGGAA
TGCTATCATCGGAGGCCTTTCCCAAGGCGGGCGTGCTAAGGAAGCTGTGACCATGTTCAT
GGAGATGAGGAAATGTGGGTTCGAACCTGATGAAGTGACTATGGTGAGTGTGACATCGGC
TTGTGGAAGCTTAGGGCACTTGGACCTGGCACTTCAATTGCATAAATGCGTCTACCAAGC
TAAAACATCGGAGAGGTCGGATACTTTGACGTTGAATTCGCTTGTAGACATGTATGGAAA
ATGCGGACGGATGGACTTAGCTTACAGGGTATTTTCGAGGATGGATGAGCCAAATGTGTC
GTCGTGGACATCCATGATCGTGGGCTATGCGATGCACGGGCAGTTGTATGATGCCCTGGA
ATGCTTCAGGTGCATGAGAGAAGCAGGAGTGAGGCCTAACCATGTGACGTTTATTGGGGT
GCTGAGCGCATGTGTGCATGGCGGGGCAGTGCAAGAGGGAAAGTACTACTTCGACATGAT
GACGACCGCTTACGGGCTAGTGCCCAGGATGCAGCACTATGGGTGCATGGTAGATCTGCT
CGGACGGGCGGGGCTGCTGGAGGAGGCAAGAAAGATGGTGGAGAGGATGCCGATGAAGGC
GAATGTAATAGTTTGGGGGTGTTTGATGGGGGCCTGTGAGAAGTACGGGAATGTGAAGAT
GGGGGAGTGGGTGGCCGAGCATTTGCTAGAGCTGGAGCCCTGGAATGATGGGGTGTTTGT
GGTTTTATCTAATATTTATGCCAGCAGAGGTTTGTGGAGAGAGGTTGAGAGGGTAAGAGG
GGTTATGAAGGAGAGAAAACTTGACAAGGTTCCTGCTTATAGCTTGGCAACGAATGCAGA
CTAAAACCCAATAAACTTGATCTGTTTGAATCGTCTGATTTTTATTTTTTAAATGAATTT
GAATCCTTCCGTGGC