Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g03230.t01
CDS Infomation

cds chromosome:12X:11:2600033:2615075:-1 gene:VIT_11s0016g03230 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCGTGGCTCAAAGCTGCAGAAGATTTGTTTGAAGTTGTTGATCGAAGGGCAAAG
CTGGTTGTCAGTGAGTTGTCAGATGAGCAGCATGATGGTCAAGCACCAGATTCTAATGGA
CAAGGATCACAAACCAAGAAGACAAAACCAAAATCAAAGTCAAAGGCTCAAAAGAGACTC
TCTACAAATGAACCTTCTAAAATAAATGATACTGCACAGGTGCAAACTGGCACACAACCA
GCAGTATCAGATATAGCACCTGATAAAGATAGGGCTACTCGATCATTTGAAAATGATGAA
ACCACATCCAGTAACTCTACAGCCCAAGCAAATAATGAACAGCTGCAGAATGGCAATAAA
GATGCCTCCGTGTTTGGCATTCCTTCATTGGAGACACTTCCAAATGATATGGTTAAACCT
GAAGCTGATCTTCCAGAAGTTGCGCCTACTGTTACTGATGTTGAAGCCATTGCATCAACT
TCAAATGGTGAGCTTGTCAATGATAAAGCTGATGCTAATGAAGGACAGCCTACTTCATTT
TCCCCAACAGCAGGAGTTGAGATTGTAAGTGAAGATCATCCAGTCGAAGCAGGCCAGAAT
ATCAAGTCCAGAGATGCAGATGTTCCCTCACAGATTGACCAAGAGGGATCTCAATCTGTA
AATGTTGATGCACCTAGTAGCAGTGATACACAATCAAATGATTCTGAAATCAAGGTTGAA
ACAATTTCCAACCAAAAAAAGCAACAGGAGCATAAGGGTGATGCTTCTCCAATGAAATTA
CAGGACCAACTTGATGAGGCTCAAGGACTTCTTAAGACTGCAGTTTCCACTGGTCAGTCA
AAAGAGGCGAGATTAACTAGGGTTTGTGCTGGACTTTTAACCCGTCTTCAAGAATGCAAA
TCTGAAAATGCACAGTTGGAAGAACTTCTCACTGCAGAGAAAGAGCTTAGTAACTCATAT
GAGGCTCGCATAAAGCAACTACAGCAAGATTTATCTGCATCCAAAATTGAAGTGAGCAAA
GTAGAGTCAATTATGGTTGAGGCTTTGGCTGCAAAGAACTCTGAGATTGAAGCACTTGTC
AATTCTATGGATGCACTTAAGAAACAAGCAGCTTTTTCTGAAGGAAATCTGGCTTCCATG
CAGGCAAATATGGAGTCTATTATGAGAAATAGGGAACTGACAGAGACGCGGATGATGCAG
GCTCTGCGGGAGGAGCTGGCTTCTGCAGAACGGAGAGCAGAAGAAGAGCGTGCGGCACAC
CATGCTACCAAAATGGCTGCTATGGAAAGGGAGGTCGAGTTGGAACACCAAGCAGTGGAA
GCGTCCACAGCCCTTGCCAGGATCCAGAGAGTAGCAGATGAGAGGACAGCGAAGGCTGCA
GAGTTTGAGCAGAAGGTCGCACTGCTTGAGGTTGAATGTGCAACTTTAAATCAAGAACTG
CATGATATGGAAGCTCGTGCTCGCCGTGGACAAAAGAAATCCCCTGAAGAGGCCAATCAA
GTGATTCAGATGCAGGCATGGCAGGAAGAGGTGGAACGTGCACGCCAAGGTCAAAGAGAT
GCAGAGGCCAAGCTTTCTTCTATGGAGGCTGAATTGCAAAAAATGAGAGTTGAAATGGCT
GCCATGAAAAGAGATGCAGAGCATTATTCACGTCAGGAGCATATGGAGCTGGAGAAACGC
TACCGTGAACTAACTGACCTATTGTACAACAAGCAAACACAGCTAGAAGCCATGGCTAGT
GAAAAAGCTGCAGCAGGGTTTCAATTGGAGAAAGAGGTCAAACGTCTTAAAGAAGCACAG
GTAGAAGCAGAAAGAAGTAGAACCTCCCGCCGTGGTTCAGCATCTTGGGAAGACGACACT
GACATAAAAGCACTTGAGCCTCTTCCCTTGCATCACCGCCATATGGCTGCAGCAAGCATA
CAGTTGCAGAAGGCTGCAAAACTTTTAGATTCAGGGGCTGTCAGAGCCACAAGATTTCTC
TGGCGGTATCCAACTGCCCGATTGCTCCTGCTTTTCTATCTGGTATTTGTGCATCTCTTC
TTGATGTACCTTTTACATCACCTTCAGGAGCAAGCTGATGAATTGGCATCTAGAGAAGTT
GCCCAATCTATGGGACTCGCCACCCCTACCTTACCATGA

Peptide Sequence

PEP ID

VIT_11s0016g03230.t01
PEP Infomation

pep chromosome:12X:11:2600033:2615075:-1 gene:VIT_11s0016g03230 transcript:VIT_11s0016g03230.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASWLKAAEDLFEVVDRRAKLVVSELSDEQHDGQAPDSNGQGSQTKKTKPKSKSKAQKRL
STNEPSKINDTAQVQTGTQPAVSDIAPDKDRATRSFENDETTSSNSTAQANNEQLQNGNK
DASVFGIPSLETLPNDMVKPEADLPEVAPTVTDVEAIASTSNGELVNDKADANEGQPTSF
SPTAGVEIVSEDHPVEAGQNIKSRDADVPSQIDQEGSQSVNVDAPSSSDTQSNDSEIKVE
TISNQKKQQEHKGDASPMKLQDQLDEAQGLLKTAVSTGQSKEARLTRVCAGLLTRLQECK
SENAQLEELLTAEKELSNSYEARIKQLQQDLSASKIEVSKVESIMVEALAAKNSEIEALV
NSMDALKKQAAFSEGNLASMQANMESIMRNRELTETRMMQALREELASAERRAEEERAAH
HATKMAAMEREVELEHQAVEASTALARIQRVADERTAKAAEFEQKVALLEVECATLNQEL
HDMEARARRGQKKSPEEANQVIQMQAWQEEVERARQGQRDAEAKLSSMEAELQKMRVEMA
AMKRDAEHYSRQEHMELEKRYRELTDLLYNKQTQLEAMASEKAAAGFQLEKEVKRLKEAQ
VEAERSRTSRRGSASWEDDTDIKALEPLPLHHRHMAAASIQLQKAAKLLDSGAVRATRFL
WRYPTARLLLLFYLVFVHLFLMYLLHHLQEQADELASREVAQSMGLATPTLP

Transcript Sequence

Transcript ID

VIT_11s0016g03230.t01
Transcript Infomation

cdna chromosome:12X:11:2600033:2615075:-1 gene:VIT_11s0016g03230 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GACACGGAGTTGTGATACACATTTACAAAACGACCTGTTACGACCGCACCCAAACGGTGT
CGTTTCATCGCACCATTGAGATCTTGCAGGTATCAGACCAAACCCCCCCTTAATTGGAGC
CGTTGGGTTCAATACTCCTATGACCGATCTCTAGGGCACCATTGTTTCAATGGCTTCGTG
GCTCAAAGCTGCAGAAGATTTGTTTGAAGTTGTTGATCGAAGGGCAAAGCTGGTTGTCAG
TGAGTTGTCAGATGAGCAGCATGATGGTCAAGCACCAGATTCTAATGGACAAGGATCACA
AACCAAGAAGACAAAACCAAAATCAAAGTCAAAGGCTCAAAAGAGACTCTCTACAAATGA
ACCTTCTAAAATAAATGATACTGCACAGGTGCAAACTGGCACACAACCAGCAGTATCAGA
TATAGCACCTGATAAAGATAGGGCTACTCGATCATTTGAAAATGATGAAACCACATCCAG
TAACTCTACAGCCCAAGCAAATAATGAACAGCTGCAGAATGGCAATAAAGATGCCTCCGT
GTTTGGCATTCCTTCATTGGAGACACTTCCAAATGATATGGTTAAACCTGAAGCTGATCT
TCCAGAAGTTGCGCCTACTGTTACTGATGTTGAAGCCATTGCATCAACTTCAAATGGTGA
GCTTGTCAATGATAAAGCTGATGCTAATGAAGGACAGCCTACTTCATTTTCCCCAACAGC
AGGAGTTGAGATTGTAAGTGAAGATCATCCAGTCGAAGCAGGCCAGAATATCAAGTCCAG
AGATGCAGATGTTCCCTCACAGATTGACCAAGAGGGATCTCAATCTGTAAATGTTGATGC
ACCTAGTAGCAGTGATACACAATCAAATGATTCTGAAATCAAGGTTGAAACAATTTCCAA
CCAAAAAAAGCAACAGGAGCATAAGGGTGATGCTTCTCCAATGAAATTACAGGACCAACT
TGATGAGGCTCAAGGACTTCTTAAGACTGCAGTTTCCACTGGTCAGTCAAAAGAGGCGAG
ATTAACTAGGGTTTGTGCTGGACTTTTAACCCGTCTTCAAGAATGCAAATCTGAAAATGC
ACAGTTGGAAGAACTTCTCACTGCAGAGAAAGAGCTTAGTAACTCATATGAGGCTCGCAT
AAAGCAACTACAGCAAGATTTATCTGCATCCAAAATTGAAGTGAGCAAAGTAGAGTCAAT
TATGGTTGAGGCTTTGGCTGCAAAGAACTCTGAGATTGAAGCACTTGTCAATTCTATGGA
TGCACTTAAGAAACAAGCAGCTTTTTCTGAAGGAAATCTGGCTTCCATGCAGGCAAATAT
GGAGTCTATTATGAGAAATAGGGAACTGACAGAGACGCGGATGATGCAGGCTCTGCGGGA
GGAGCTGGCTTCTGCAGAACGGAGAGCAGAAGAAGAGCGTGCGGCACACCATGCTACCAA
AATGGCTGCTATGGAAAGGGAGGTCGAGTTGGAACACCAAGCAGTGGAAGCGTCCACAGC
CCTTGCCAGGATCCAGAGAGTAGCAGATGAGAGGACAGCGAAGGCTGCAGAGTTTGAGCA
GAAGGTCGCACTGCTTGAGGTTGAATGTGCAACTTTAAATCAAGAACTGCATGATATGGA
AGCTCGTGCTCGCCGTGGACAAAAGAAATCCCCTGAAGAGGCCAATCAAGTGATTCAGAT
GCAGGCATGGCAGGAAGAGGTGGAACGTGCACGCCAAGGTCAAAGAGATGCAGAGGCCAA
GCTTTCTTCTATGGAGGCTGAATTGCAAAAAATGAGAGTTGAAATGGCTGCCATGAAAAG
AGATGCAGAGCATTATTCACGTCAGGAGCATATGGAGCTGGAGAAACGCTACCGTGAACT
AACTGACCTATTGTACAACAAGCAAACACAGCTAGAAGCCATGGCTAGTGAAAAAGCTGC
AGCAGGGTTTCAATTGGAGAAAGAGGTCAAACGTCTTAAAGAAGCACAGGTAGAAGCAGA
AAGAAGTAGAACCTCCCGCCGTGGTTCAGCATCTTGGGAAGACGACACTGACATAAAAGC
ACTTGAGCCTCTTCCCTTGCATCACCGCCATATGGCTGCAGCAAGCATACAGTTGCAGAA
GGCTGCAAAACTTTTAGATTCAGGGGCTGTCAGAGCCACAAGATTTCTCTGGCGGTATCC
AACTGCCCGATTGCTCCTGCTTTTCTATCTGGTATTTGTGCATCTCTTCTTGATGTACCT
TTTACATCACCTTCAGGAGCAAGCTGATGAATTGGCATCTAGAGAAGTTGCCCAATCTAT
GGGACTCGCCACCCCTACCTTACCATGATCCGATAGCTGCTCCAAGCAGTGTCAAAGAGG
CAGATTTATTGATTCAACAAATAGAAATGTAATGGCAGCTTGAGGTTTGCTCAACAAAAA
TTATAAGAACACAAAACAGAAAGGGAAACTGGGTCTTATCCTTTCAATCCATATGTCTGT
ACACATCATTGTCTACCCGATATCCAACTACTTGAGGAAAGAGTCAGGTGGTAGAGGACC
TTCTGCAGGAGTTGGAAATTGGCAGCTGGAGTTGATGCCAACACATTGGAAGCAACTCTC
TTCATGTAGCAACACCAATGCAAATGTCCATATATTTCGTTAACTGGCAAGCTTATGTTT
TTATGATAAATTTGGTTTTGCTGTTGACACTAAGAACATATATACCTCAAAAGTGGGAGC
CTCTATATTCCAGATCACAACCTACTCTTTGCTCCATGAACATATGAAATTTCATTTTAT
TTATCAGGCAATTGCCTACACTGGCTGTCAAAGA