Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g03150.t01
CDS Infomation

cds chromosome:12X:11:2521015:2527145:1 gene:VIT_11s0016g03150 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAGAAGAGAGACTAAGCATATACAGAGTATCGAGAAGCATAAAGCGGAAAGAGAAC
AGTCTCTACAACGCCCTACGGTCCATCTACGAGGACTCCATCTTCGTCGGGGAGATCTCT
CAGCTCTGGCCTCAATTGCCCCTTCTCGCTAATCTCCGTTGTGGCCTCTGGTACTCCCCC
AATTTCCAGTACACCTGCTACTTCAAATCCACCGATGGTCATACCAACAACTGCTCTTTC
AACACTTCTCGCCTCAACTTCCACGTTGCCCTACTCGCTGGACAGAGGGGAGGGTGCATT
ATTGTGGATTCCACAAGGAGAGGGAAGCGGTTTCCTGATAGCTTGACGAAAACCATACCA
ATTTGGACTTGTGTTTTGAATCGGGCTATTTTCAATTATTTCAACAGAATTGGAGAAAGC
GGTTCTGGTTTTGATGCTGATTCAAGTAGTTATAATAGAAATGGTGAAAATACAAGGCAT
ATCTCTCATGATTGGGATTGTTCCTTGCACCTACCACTGTGGGTTTCAAAAACAGAGAAA
GCAGCCATTGAGGACCGCTTAGAAGAATGGACCAAAGAGTTGGAAGCTAGTGGAGCTGAT
ATTGCATCTCTTGCATTGTCTTTGAAAAAGCCCTTACGCCCCCTATGGATTTCTCAAAAG
ACTGTCATCTGGTTAAATGAAGTTCCTGATTGTGATTCTTGGGATTTCACTCCCATGATA
CTTGTATCTGCATCTTCCTCAACCGGCATTTTCCAGAATAGGACTACCTCAGAGTTTAGC
TGGAAGTATATACCTGGGGCTGGAGATGATGAAGAAAGCTGGGCAAGGGGTTTATCACCT
AAAGTTTTCTGGAATCACGCCAGTGAGCTTATAAACTCGGGGCCTGATTTGTGTAACCAG
AAGGTAGCTACTATTGTTGAAAATGACAGAGTATATCGTGCTCATAGGGGACAGAATACT
CCTCAAGTCACTGTCAAGCTTTCAAAGTTAGCAAGCACTGGCCGTCTTTCTGAACAAGAA
CCACCATTATACTTTGATATTTCAAACATGAACTCTGCCCATGAAGATTGCATAATATCT
TGGCTGGGTTCAACTAACCTTGCTGTGGGCATAGCTCAGTTTGGCACAAATGTTCCTAAG
GTTGATTGTATATTGAACTGTCATCCGGAGTTGGTCTCTGCTTGTCTTCCGAATGCTATA
GCATATCTGCATCTTCCTATTGTGAACTCAAAATTGGACCGGTTTTCCTTGCTAAGCAAC
CTCCCTTCTGCATTCAACTTTGCAAAGTCGAACCTAAGCAAGGGGAAGAGTCTTTTAGTG
TGCTGTCATAATGGTGAAGATATTAGTATATGTGTATGTCTAGCAATCTTGACATCATTG
TTCAATGATGAAGGTACTTTTGATGATGGGAAGTCCTTCAGTGAAACATGTATTACCAAG
TGGGAGATGAGAAGACGACTCGTATTTATCTGCAAATATGCAGTAAATGCCCGACCATCT
AGAGGAAATCTGAAGCAGGTGTTTAGTTTTCTTAGTGGTGGAAGAGTTAGTTCTGTTTCA
TGA

Peptide Sequence

PEP ID

VIT_11s0016g03150.t01
PEP Infomation

pep chromosome:12X:11:2521015:2527145:1 gene:VIT_11s0016g03150 transcript:VIT_11s0016g03150.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAEERLSIYRVSRSIKRKENSLYNALRSIYEDSIFVGEISQLWPQLPLLANLRCGLWYSP
NFQYTCYFKSTDGHTNNCSFNTSRLNFHVALLAGQRGGCIIVDSTRRGKRFPDSLTKTIP
IWTCVLNRAIFNYFNRIGESGSGFDADSSSYNRNGENTRHISHDWDCSLHLPLWVSKTEK
AAIEDRLEEWTKELEASGADIASLALSLKKPLRPLWISQKTVIWLNEVPDCDSWDFTPMI
LVSASSSTGIFQNRTTSEFSWKYIPGAGDDEESWARGLSPKVFWNHASELINSGPDLCNQ
KVATIVENDRVYRAHRGQNTPQVTVKLSKLASTGRLSEQEPPLYFDISNMNSAHEDCIIS
WLGSTNLAVGIAQFGTNVPKVDCILNCHPELVSACLPNAIAYLHLPIVNSKLDRFSLLSN
LPSAFNFAKSNLSKGKSLLVCCHNGEDISICVCLAILTSLFNDEGTFDDGKSFSETCITK
WEMRRRLVFICKYAVNARPSRGNLKQVFSFLSGGRVSSVS

Transcript Sequence

Transcript ID

VIT_11s0016g03150.t01
Transcript Infomation

cdna chromosome:12X:11:2521015:2527145:1 gene:VIT_11s0016g03150 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAGAAGAGAGACTAAGCATATACAGAGTATCGAGAAGCATAAAGCGGAAAGAGAAC
AGTCTCTACAACGCCCTACGGTCCATCTACGAGGACTCCATCTTCGTCGGGGAGATCTCT
CAGCTCTGGCCTCAATTGCCCCTTCTCGCTAATCTCCGTTGTGGCCTCTGGTACTCCCCC
AATTTCCAGTACACCTGCTACTTCAAATCCACCGATGGTCATACCAACAACTGCTCTTTC
AACACTTCTCGCCTCAACTTCCACGTTGCCCTACTCGCTGGACAGAGGGGAGGGTGCATT
ATTGTGGATTCCACAAGGAGAGGGAAGCGGTTTCCTGATAGCTTGACGAAAACCATACCA
ATTTGGACTTGTGTTTTGAATCGGGCTATTTTCAATTATTTCAACAGAATTGGAGAAAGC
GGTTCTGGTTTTGATGCTGATTCAAGTAGTTATAATAGAAATGGTGAAAATACAAGGCAT
ATCTCTCATGATTGGGATTGTTCCTTGCACCTACCACTGTGGGTTTCAAAAACAGAGAAA
GCAGCCATTGAGGACCGCTTAGAAGAATGGACCAAAGAGTTGGAAGCTAGTGGAGCTGAT
ATTGCATCTCTTGCATTGTCTTTGAAAAAGCCCTTACGCCCCCTATGGATTTCTCAAAAG
ACTGTCATCTGGTTAAATGAAGTTCCTGATTGTGATTCTTGGGATTTCACTCCCATGATA
CTTGTATCTGCATCTTCCTCAACCGGCATTTTCCAGAATAGGACTACCTCAGAGTTTAGC
TGGAAGTATATACCTGGGGCTGGAGATGATGAAGAAAGCTGGGCAAGGGGTTTATCACCT
AAAGTTTTCTGGAATCACGCCAGTGAGCTTATAAACTCGGGGCCTGATTTGTGTAACCAG
AAGGTAGCTACTATTGTTGAAAATGACAGAGTATATCGTGCTCATAGGGGACAGAATACT
CCTCAAGTCACTGTCAAGCTTTCAAAGTTAGCAAGCACTGGCCGTCTTTCTGAACAAGAA
CCACCATTATACTTTGATATTTCAAACATGAACTCTGCCCATGAAGATTGCATAATATCT
TGGCTGGGTTCAACTAACCTTGCTGTGGGCATAGCTCAGTTTGGCACAAATGTTCCTAAG
GTTGATTGTATATTGAACTGTCATCCGGAGTTGGTCTCTGCTTGTCTTCCGAATGCTATA
GCATATCTGCATCTTCCTATTGTGAACTCAAAATTGGACCGGTTTTCCTTGCTAAGCAAC
CTCCCTTCTGCATTCAACTTTGCAAAGTCGAACCTAAGCAAGGGGAAGAGTCTTTTAGTG
TGCTGTCATAATGGTGAAGATATTAGTATATGTGTATGTCTAGCAATCTTGACATCATTG
TTCAATGATGAAGGTACTTTTGATGATGGGAAGTCCTTCAGTGAAACATGTATTACCAAG
TGGGAGATGAGAAGACGACTCGTATTTATCTGCAAATATGCAGTAAATGCCCGACCATCT
AGAGGAAATCTGAAGCAGGTGTTTAGTTTTCTTAGTGGTGGAAGAGTTAGTTCTGTTTCA
TGAGAAGCCTTTTGATTCTACTCCTGTAGGACATGTTGGCAACAAAAACCACAAGACCTC
TGCAGAATTGATGGAAGTAGCTGCCTGTGAAAATCCATGGATGATTTACAATGAAGTCTT
TGCAACTCTATTTCATCAGCTCTCCTGAGAAATAAAAAACTAAGAGATTACTTTCAACGT
GAAAATATTTTATATCTGGAGCTCCCCTTCCCTTTTTCATGTGCCATTACACTACCTTGA
GAGCACATTGGACTTGCATTGTTGGACAAGAGGCCAAATTATCCATGTTGTACCACTTCT
CTTCAAAGTGTCTTCCATCATACATTCTACAGCCACAGCTGCATTCCTTAAAGCTCTGTG
GACCTCTCCCCAGCCCTAGTTTGGCATTTTGTTCAAAGCCAAGATTTTCAGGTTTCATTT
GGGTGTTGTTTTAATTTCAATGTAATTTCATCAGGGCCAGAAACCTACCATATCTCGCAT
CCACTTTTTCTCAACAGGAGGATTGATTAACAAGGATTTCCTTTATTGTGCAATGAGAAA
CTGACTGTCCTTTCTTGTTA