Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g03130.t01
CDS Infomation

cds chromosome:12X:11:2508651:2516201:1 gene:VIT_11s0016g03130 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAGAGACAGTGTCGGCATTCGATTCGTATCTCTTCTCTGCCAGCAGAGCTTGTTGC
AGTCCTCTCGCCATTTTTATCCAGATCCAGGGATGCGTAATCTGCTTAACTCTTGCTCTT
GGGTGGGCTCTTGCAGCTTATGTCAGGAATCGAGAGATCAAGCGAATAAAGGATAATATG
AAAGGTGGGAATAGCTTTGCATTTCTTTACCATGATATCAATGACCTTGAGCACTCTAAT
CAAGCTAAGCTCCCAAGAGTGTCAGTTGTTATGCCTTTAAAGGGATTTGGAGAACATAAT
CTACACAACTGGAGGAGTCAGGTCACATCTCTGTATGGTGGTCCTTTAGAATTCCTTTTT
GTTGTGGAAAGTACAGAAGACCCAGCTTACCACGCTGTAACTCGGTTGAAATCAGATTTT
AAGGATGATGTTGATATTAAGATTGTTGTGGCTGATTTGTCAACAACTTGCAGTCAAAAA
GTTCATAATCAGTTGGTTGGGGTGGATAGAATGCATAAAGACAGCAAGTATGTATTATTC
CTGGATGATGATGTCAGGCTGCATCCTGGGACCATTGGGGCCCTCGTTGCTGAGATGGAA
AAAAATCCTGAGATATTTATTCAAACCGGATATCCTCTTGATTTGCCTTCTGGAAGTTTA
GGAAGTTACTGCATTTACGAATATCATATGCCTTGTTCGATGGGTTTCGCTACAGGTGGA
AAAACATTCTTTTTGTGGGGAGGGTGTATGATGATGCATGCGGATGATTTCAGAAATGAT
AATTATGGAGTGGTTTCGGGACTTCGAGACGGTGGATACTCTGATGACATGACTCTTGCA
GCAATTGCTGGGAATCATAAGAGGCTGATTACATCTCCGCCAGTTGCCGTCTTTCCTCAC
CCCCTTGCAAGTGATCTTAGTTTTTCAAGATACTGGAATTACTTGAGGAAGCAAACATTT
GTTCTTGAATCATACATTTCGAAGGTTAACTGGGTTATGAATCGTGCATTATTTTCTTCC
CACTGCTATCTATCGTGGGGATTTGTAGCACCCTACTTGATGGCTATAATTCACATTGCA
GCAGCACTACGAGTTGCTTCTAAAGAGTACTCGCCTGAGGAAACAACCTTTGCTTCTGGT
GGGTTGTTGCTGGTTAGCTCCCTTGCTATATGCACTATTGTAGAACTTCTGTCAATGTGG
AACTTGACAAGGATAGAAGTTCAACTATGCAACATGTTATCTCCTGAGGCAAGCCCACTG
TCACTTGCGTCGTATAACTGGGGCCTTGTGTTTATTGCATTGCTGGTGGATAATTTTTTG
TACCCTGTTTCTGCATTCCGTTCACATTTGACTCAATCTATCAATTGGTCTGGTATCAGA
TACCACTTGAAAGATGGGAAGATAAGCAAGATTGACAGAGGCAAAGATATTGGTTCCAAC
TACACTGACCTGGGAGGAAAGCATTTATATGGTAAGAAAGGTGCCCCAACAAAAGTGTCA
TTCCTAAGCTCTTTGGCAAGAAGTTTGCAACAGTGGCACCAGCCCAAGAAATTCGATGTC
TAG

Peptide Sequence

PEP ID

VIT_11s0016g03130.t01
PEP Infomation

pep chromosome:12X:11:2508651:2516201:1 gene:VIT_11s0016g03130 transcript:VIT_11s0016g03130.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGETVSAFDSYLFSASRACCSPLAIFIQIQGCVICLTLALGWALAAYVRNREIKRIKDNM
KGGNSFAFLYHDINDLEHSNQAKLPRVSVVMPLKGFGEHNLHNWRSQVTSLYGGPLEFLF
VVESTEDPAYHAVTRLKSDFKDDVDIKIVVADLSTTCSQKVHNQLVGVDRMHKDSKYVLF
LDDDVRLHPGTIGALVAEMEKNPEIFIQTGYPLDLPSGSLGSYCIYEYHMPCSMGFATGG
KTFFLWGGCMMMHADDFRNDNYGVVSGLRDGGYSDDMTLAAIAGNHKRLITSPPVAVFPH
PLASDLSFSRYWNYLRKQTFVLESYISKVNWVMNRALFSSHCYLSWGFVAPYLMAIIHIA
AALRVASKEYSPEETTFASGGLLLVSSLAICTIVELLSMWNLTRIEVQLCNMLSPEASPL
SLASYNWGLVFIALLVDNFLYPVSAFRSHLTQSINWSGIRYHLKDGKISKIDRGKDIGSN
YTDLGGKHLYGKKGAPTKVSFLSSLARSLQQWHQPKKFDV

Transcript Sequence

Transcript ID

VIT_11s0016g03130.t01
Transcript Infomation

cdna chromosome:12X:11:2508651:2516201:1 gene:VIT_11s0016g03130 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTGATCTGAGGCGGAGGTAGAGAGGGACTGTAGTTGAATTCTAGGGTTTTGGTTTTT
TTTTTTTCCTTCCTTCTCTTCTTCTCTCTGCTCCCTCATTTGCCCTAGCGCGCAATGGGA
GAGACAGTGTCGGCATTCGATTCGTATCTCTTCTCTGCCAGCAGAGCTTGTTGCAGTCCT
CTCGCCATTTTTATCCAGATCCAGGGATGCGTAATCTGCTTAACTCTTGCTCTTGGGTGG
GCTCTTGCAGCTTATGTCAGGAATCGAGAGATCAAGCGAATAAAGGATAATATGAAAGGT
GGGAATAGCTTTGCATTTCTTTACCATGATATCAATGACCTTGAGCACTCTAATCAAGCT
AAGCTCCCAAGAGTGTCAGTTGTTATGCCTTTAAAGGGATTTGGAGAACATAATCTACAC
AACTGGAGGAGTCAGGTCACATCTCTGTATGGTGGTCCTTTAGAATTCCTTTTTGTTGTG
GAAAGTACAGAAGACCCAGCTTACCACGCTGTAACTCGGTTGAAATCAGATTTTAAGGAT
GATGTTGATATTAAGATTGTTGTGGCTGATTTGTCAACAACTTGCAGTCAAAAAGTTCAT
AATCAGTTGGTTGGGGTGGATAGAATGCATAAAGACAGCAAGTATGTATTATTCCTGGAT
GATGATGTCAGGCTGCATCCTGGGACCATTGGGGCCCTCGTTGCTGAGATGGAAAAAAAT
CCTGAGATATTTATTCAAACCGGATATCCTCTTGATTTGCCTTCTGGAAGTTTAGGAAGT
TACTGCATTTACGAATATCATATGCCTTGTTCGATGGGTTTCGCTACAGGTGGAAAAACA
TTCTTTTTGTGGGGAGGGTGTATGATGATGCATGCGGATGATTTCAGAAATGATAATTAT
GGAGTGGTTTCGGGACTTCGAGACGGTGGATACTCTGATGACATGACTCTTGCAGCAATT
GCTGGGAATCATAAGAGGCTGATTACATCTCCGCCAGTTGCCGTCTTTCCTCACCCCCTT
GCAAGTGATCTTAGTTTTTCAAGATACTGGAATTACTTGAGGAAGCAAACATTTGTTCTT
GAATCATACATTTCGAAGGTTAACTGGGTTATGAATCGTGCATTATTTTCTTCCCACTGC
TATCTATCGTGGGGATTTGTAGCACCCTACTTGATGGCTATAATTCACATTGCAGCAGCA
CTACGAGTTGCTTCTAAAGAGTACTCGCCTGAGGAAACAACCTTTGCTTCTGGTGGGTTG
TTGCTGGTTAGCTCCCTTGCTATATGCACTATTGTAGAACTTCTGTCAATGTGGAACTTG
ACAAGGATAGAAGTTCAACTATGCAACATGTTATCTCCTGAGGCAAGCCCACTGTCACTT
GCGTCGTATAACTGGGGCCTTGTGTTTATTGCATTGCTGGTGGATAATTTTTTGTACCCT
GTTTCTGCATTCCGTTCACATTTGACTCAATCTATCAATTGGTCTGGTATCAGATACCAC
TTGAAAGATGGGAAGATAAGCAAGATTGACAGAGGCAAAGATATTGGTTCCAACTACACT
GACCTGGGAGGAAAGCATTTATATGGTAAGAAAGGTGCCCCAACAAAAGTGTCATTCCTA
AGCTCTTTGGCAAGAAGTTTGCAACAGTGGCACCAGCCCAAGAAATTCGATGTCTAGCAA
TATATCCTACAAACAAGAAATTGTGATAATTTTATCTTCTTGGCCAGATGTGATGATCAG
TAATGACAGCTTCAAGGGTAAAACTTTTGGCAGATCGCTTGGTCTTGCCTGGTCATCCTG
GGATTACATGCCCAATCCTTTATGGCATTGATGGATTTCAATATTCTAGGATCGGTCTCA
TTTTTTTTTTTAATTCTTATTCAATCGATTTGATTCTTCAGCCCCACCCTACATGTATGG
GCTGATTTTGTAATTTGTGCCTGTCATGTTCTTCTGTAATTCCTTAAATTCTT